RNA–Protein interactions for RNA: ENST00000625716.2

TCF4-249, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 359 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-249ENST00000625716 KCNG1Q9UIX4 513 aa7.06□□□□□ -1.28
TCF4-249ENST00000625716 LZTS1Q9Y250 596 aa7.06□□□□□ -1.28
TCF4-249ENST00000625716 CNTNAP2Q9UHC6 1331 aa7.05□□□□□ -1.28
TCF4-249ENST00000625716 TTC3P53804 2025 aa7.05□□□□□ -1.28
TCF4-249ENST00000625716 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP7.05□□□□□ -1.28
TCF4-249ENST00000625716 FSD2A1L4K1 749 aa7.05□□□□□ -1.28
TCF4-249ENST00000625716 CCDC169A6NNP5 214 aa7.05□□□□□ -1.28
TCF4-249ENST00000625716 E9PMD0 336 aa7.05□□□□□ -1.28
TCF4-249ENST00000625716 ZC3H11AO75152 810 aaKnown RBP eCLIP7.05□□□□□ -1.28
TCF4-249ENST00000625716 OFD1O75665 1012 aa7.05□□□□□ -1.28
TCF4-249ENST00000625716 ALDH2P05091 517 aa7.05□□□□□ -1.28
TCF4-249ENST00000625716 SRGAP2BP0DMP2 458 aa7.05□□□□□ -1.28
TCF4-249ENST00000625716 NCLP19338 710 aaKnown RBP7.05□□□□□ -1.28
TCF4-249ENST00000625716 CDC25AP30304 524 aa7.05□□□□□ -1.28
TCF4-249ENST00000625716 HOXA11P31270 313 aaPredicted RBP7.05□□□□□ -1.28
TCF4-249ENST00000625716 UBA7P41226 1012 aa7.05□□□□□ -1.28
TCF4-249ENST00000625716 NAMPTP43490 491 aa7.05□□□□□ -1.28
TCF4-249ENST00000625716 NDUFV1P49821 464 aa7.05□□□□□ -1.28
TCF4-249ENST00000625716 KCNQ1P51787 676 aa7.05□□□□□ -1.28
TCF4-249ENST00000625716 EFNA5P52803 228 aa7.05□□□□□ -1.28
TCF4-249ENST00000625716 BCAR1P56945 870 aa7.05□□□□□ -1.28
TCF4-249ENST00000625716 PLCB3Q01970 1234 aa7.05□□□□□ -1.28
TCF4-249ENST00000625716 MBTD1Q05BQ5 628 aa7.05□□□□□ -1.28
TCF4-249ENST00000625716 TYRO3Q06418 890 aa7.05□□□□□ -1.28
TCF4-249ENST00000625716 SPEM2Q0P670 501 aa7.05□□□□□ -1.28
TCF4-249ENST00000625716 PRPF4BQ13523 1007 aaKnown RBP7.05□□□□□ -1.28
TCF4-249ENST00000625716 MAPK6Q16659 721 aa7.05□□□□□ -1.28
TCF4-249ENST00000625716 LEXMQ3ZCV2 418 aa7.05□□□□□ -1.28
TCF4-249ENST00000625716 SLC27A1Q6PCB7 646 aa7.05□□□□□ -1.28
TCF4-249ENST00000625716 LRRC55Q6ZSA7 311 aa7.05□□□□□ -1.28
TCF4-249ENST00000625716 TMC7Q7Z402 723 aa7.05□□□□□ -1.28
TCF4-249ENST00000625716 MRPL10Q7Z7H8 261 aaKnown RBP7.05□□□□□ -1.28
TCF4-249ENST00000625716 RBM23Q86U06 439 aaKnown RBP7.05□□□□□ -1.28
TCF4-249ENST00000625716 MRPS27Q92552 414 aaKnown RBP7.05□□□□□ -1.28
TCF4-249ENST00000625716 PRIMPOLQ96LW4 560 aa7.05□□□□□ -1.28
TCF4-249ENST00000625716 AK8Q96MA6 479 aa7.05□□□□□ -1.28
TCF4-249ENST00000625716 DRC1Q96MC2 740 aa7.05□□□□□ -1.28
TCF4-249ENST00000625716 ADPGKQ9BRR6 497 aa7.05□□□□□ -1.28
TCF4-249ENST00000625716 APOL6Q9BWW8 343 aa7.05□□□□□ -1.28
TCF4-249ENST00000625716 CSRNP2Q9H175 543 aa7.05□□□□□ -1.28
TCF4-249ENST00000625716 TLE6Q9H808 572 aa7.05□□□□□ -1.28
TCF4-249ENST00000625716 RSAD1Q9HA92 442 aa7.05□□□□□ -1.28
TCF4-249ENST00000625716 NEUROD4Q9HD90 331 aa7.05□□□□□ -1.28
TCF4-249ENST00000625716 NGRNQ9NPE2 291 aaKnown RBP7.05□□□□□ -1.28
TCF4-249ENST00000625716 BRD7Q9NPI1 651 aa7.05□□□□□ -1.28
TCF4-249ENST00000625716 RNF19AQ9NV58 838 aa7.05□□□□□ -1.28
TCF4-249ENST00000625716 TBC1D13Q9NVG8 400 aa7.05□□□□□ -1.28
TCF4-249ENST00000625716 PARP2Q9UGN5 583 aa7.05□□□□□ -1.28
TCF4-249ENST00000625716 IPPQ9Y573 584 aa7.05□□□□□ -1.28
TCF4-249ENST00000625716 COL4A4P53420 1690 aaPredicted RBP7.05□□□□□ -1.28
TCF4-249ENST00000625716 PHLPP2Q6ZVD8 1323 aa7.04□□□□□ -1.28
TCF4-249ENST00000625716 LOXHD1Q8IVV2 1947 aa7.04□□□□□ -1.28
TCF4-249ENST00000625716 A0A1B0GUA9 196 aa7.04□□□□□ -1.28
TCF4-249ENST00000625716 PP2D1A8MPX8 630 aa7.04□□□□□ -1.28
TCF4-249ENST00000625716 NT5C1B-RDH14C9J2C7 533 aa7.04□□□□□ -1.28
TCF4-249ENST00000625716 H3BQ06 376 aaPredicted RBP7.04□□□□□ -1.28
TCF4-249ENST00000625716 K7ERI5 159 aa7.04□□□□□ -1.28
TCF4-249ENST00000625716 N4BP3O15049 544 aa7.04□□□□□ -1.28
TCF4-249ENST00000625716 SLC26A4O43511 780 aa7.04□□□□□ -1.28
TCF4-249ENST00000625716 NPTXRO95502 500 aa7.04□□□□□ -1.28
TCF4-249ENST00000625716 POMCP01189 267 aa7.04□□□□□ -1.28
TCF4-249ENST00000625716 ALBP02768 609 aa7.04□□□□□ -1.28
TCF4-249ENST00000625716 PRKCBP05771 671 aa7.04□□□□□ -1.28
TCF4-249ENST00000625716 ATF7P17544 494 aaPredicted RBP7.04□□□□□ -1.28
TCF4-249ENST00000625716 ARF4P18085 180 aaPredicted RBP7.04□□□□□ -1.28
TCF4-249ENST00000625716 SYT1P21579 422 aa7.04□□□□□ -1.28
TCF4-249ENST00000625716 DNAJB1P25685 340 aa7.04□□□□□ -1.28
TCF4-249ENST00000625716 LONP1P36776 959 aaKnown RBP7.04□□□□□ -1.28
TCF4-249ENST00000625716 PBX3P40426 434 aa7.04□□□□□ -1.28
TCF4-249ENST00000625716 NRIP1P48552 1158 aa7.04□□□□□ -1.28
TCF4-249ENST00000625716 ERVFC1P60507 584 aa7.04□□□□□ -1.28
TCF4-249ENST00000625716 HYAL1Q12794 435 aa7.04□□□□□ -1.28
TCF4-249ENST00000625716 DMP1Q13316 513 aaPredicted RBP7.04□□□□□ -1.28
TCF4-249ENST00000625716 DOC2BQ14184 412 aa7.04□□□□□ -1.28
TCF4-249ENST00000625716 SMC1AQ14683 1233 aaKnown RBP7.04□□□□□ -1.28
TCF4-249ENST00000625716 SF3A1Q15459 793 aaKnown RBP7.04□□□□□ -1.28
TCF4-249ENST00000625716 IL17AQ16552 155 aa7.04□□□□□ -1.28
TCF4-249ENST00000625716 ECM1Q16610 540 aa7.04□□□□□ -1.28
TCF4-249ENST00000625716 UBXN11Q5T124 520 aa7.04□□□□□ -1.28
TCF4-249ENST00000625716 PLPP4Q5VZY2 271 aa7.04□□□□□ -1.28
TCF4-249ENST00000625716 AGMOQ6ZNB7 445 aa7.04□□□□□ -1.28
TCF4-249ENST00000625716 CABP7Q86V35 215 aa7.04□□□□□ -1.28
TCF4-249ENST00000625716 CEP63Q96MT8 703 aa7.04□□□□□ -1.28
TCF4-249ENST00000625716 PLIN2Q99541 437 aa7.04□□□□□ -1.28
TCF4-249ENST00000625716 CDCA3Q99618 268 aaPredicted RBP7.04□□□□□ -1.28
TCF4-249ENST00000625716 TCF25Q9BQ70 676 aa7.04□□□□□ -1.28
TCF4-249ENST00000625716 C2orf49Q9BVC5 232 aaPredicted RBP7.04□□□□□ -1.28
TCF4-249ENST00000625716 TIPINQ9BVW5 301 aa7.04□□□□□ -1.28
TCF4-249ENST00000625716 EIF2AQ9BY44 585 aaKnown RBP7.04□□□□□ -1.28
TCF4-249ENST00000625716 ZSCAN16Q9H4T2 348 aaPredicted RBP7.04□□□□□ -1.28
TCF4-249ENST00000625716 POLD4Q9HCU8 107 aa7.04□□□□□ -1.28
TCF4-249ENST00000625716 KMT5AQ9NQR1 393 aa7.04□□□□□ -1.28
TCF4-249ENST00000625716 STK39Q9UEW8 545 aa7.04□□□□□ -1.28
TCF4-249ENST00000625716 FAN1Q9Y2M0 1017 aa7.04□□□□□ -1.28
TCF4-249ENST00000625716 RALGAPA2Q2PPJ7 1873 aa7.04□□□□□ -1.28
TCF4-249ENST00000625716 ARL5CA6NH57 179 aa7.03□□□□□ -1.28
TCF4-249ENST00000625716 MEIS3P2A8K0S8 358 aa7.03□□□□□ -1.28
TCF4-249ENST00000625716 M0R082 166 aa7.03□□□□□ -1.28
TCF4-249ENST00000625716 ACKR2O00590 384 aa7.03□□□□□ -1.28
TCF4-249ENST00000625716 PER2O15055 1255 aa7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms