RNA–Protein interactions for RNA: ENST00000625171.3

LINC00963-220, long intergenic non-protein coding RNA 963, humanhuman

TSL 5

Gene LINC00963, Length 830 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-220ENST00000625171 SOX5P35711 763 aa12.68□□□□□ -0.38
LINC00963-220ENST00000625171 THPOP40225 353 aa12.68□□□□□ -0.38
LINC00963-220ENST00000625171 RAB27AP51159 221 aa12.68□□□□□ -0.38
LINC00963-220ENST00000625171 KRT83P78385 493 aa12.68□□□□□ -0.38
LINC00963-220ENST00000625171 GOLGA8FQ08AF8 430 aa12.68□□□□□ -0.38
LINC00963-220ENST00000625171 GOLGA8DPQ0D2H9 430 aa12.68□□□□□ -0.38
LINC00963-220ENST00000625171 DRAP1Q14919 205 aaPredicted RBP12.68□□□□□ -0.38
LINC00963-220ENST00000625171 C10orf76Q5T2E6 689 aa12.68□□□□□ -0.38
LINC00963-220ENST00000625171 RAD9BQ6WBX8 426 aa12.68□□□□□ -0.38
LINC00963-220ENST00000625171 FAM71AQ8IYT1 594 aa12.68□□□□□ -0.38
LINC00963-220ENST00000625171 CCAR2Q8N163 923 aaKnown RBP12.68□□□□□ -0.38
LINC00963-220ENST00000625171 DEFB123Q8N688 67 aa12.68□□□□□ -0.38
LINC00963-220ENST00000625171 OR5B17Q8NGF7 314 aa12.68□□□□□ -0.38
LINC00963-220ENST00000625171 CHP1Q99653 195 aa12.68□□□□□ -0.38
LINC00963-220ENST00000625171 NHEJ1Q9H9Q4 299 aaPredicted RBP12.68□□□□□ -0.38
LINC00963-220ENST00000625171 NLRC4Q9NPP4 1024 aa12.68□□□□□ -0.38
LINC00963-220ENST00000625171 TRMT13Q9NUP7 481 aaKnown RBP12.68□□□□□ -0.38
LINC00963-220ENST00000625171 PIN4Q9Y237 131 aaKnown RBP12.68□□□□□ -0.38
LINC00963-220ENST00000625171 NOD1Q9Y239 953 aa12.68□□□□□ -0.38
LINC00963-220ENST00000625171 GINS2Q9Y248 185 aa12.68□□□□□ -0.38
LINC00963-220ENST00000625171 ADGRG1Q9Y653 693 aa12.68□□□□□ -0.38
LINC00963-220ENST00000625171 UNC80Q8N2C7 3258 aa12.67□□□□□ -0.38
LINC00963-220ENST00000625171 NPTXRO95502 500 aa12.67□□□□□ -0.38
LINC00963-220ENST00000625171 CST3P01034 146 aaPredicted RBP12.67□□□□□ -0.38
LINC00963-220ENST00000625171 FAM163BP0C2L3 166 aa12.67□□□□□ -0.38
LINC00963-220ENST00000625171 CXCL8P10145 99 aa12.67□□□□□ -0.38
LINC00963-220ENST00000625171 FGFR4P22455 802 aa12.67□□□□□ -0.38
LINC00963-220ENST00000625171 YARSP54577 528 aaKnown RBP12.67□□□□□ -0.38
LINC00963-220ENST00000625171 BFSP2Q13515 415 aa12.67□□□□□ -0.38
LINC00963-220ENST00000625171 NCOA4Q13772 614 aa12.67□□□□□ -0.38
LINC00963-220ENST00000625171 LPIN1Q14693 890 aa12.67□□□□□ -0.38
LINC00963-220ENST00000625171 SEZ6Q53EL9 994 aa12.67□□□□□ -0.38
LINC00963-220ENST00000625171 EFCAB13Q8IY85 973 aa12.67□□□□□ -0.38
LINC00963-220ENST00000625171 TMEM192Q8IY95 271 aa12.67□□□□□ -0.38
LINC00963-220ENST00000625171 HACE1Q8IYU2 909 aa12.67□□□□□ -0.38
LINC00963-220ENST00000625171 PPP1R13LQ8WUF5 828 aa12.67□□□□□ -0.38
LINC00963-220ENST00000625171 SNX27Q96L92 541 aa12.67□□□□□ -0.38
LINC00963-220ENST00000625171 CCDC42Q96M95 316 aa12.67□□□□□ -0.38
LINC00963-220ENST00000625171 PPP1R16BQ96T49 567 aa12.67□□□□□ -0.38
LINC00963-220ENST00000625171 SYT11Q9BT88 431 aa12.67□□□□□ -0.38
LINC00963-220ENST00000625171 XYLT2Q9H1B5 865 aa12.67□□□□□ -0.38
LINC00963-220ENST00000625171 UBE2TQ9NPD8 197 aaPredicted RBP12.67□□□□□ -0.38
LINC00963-220ENST00000625171 ITGA11Q9UKX5 1188 aa12.67□□□□□ -0.38
LINC00963-220ENST00000625171 PADI3Q9ULW8 664 aa12.67□□□□□ -0.38
LINC00963-220ENST00000625171 A0A0U1RQF3 1178 aa12.66□□□□□ -0.38
LINC00963-220ENST00000625171 SOWAHDA6NJG2 315 aa12.66□□□□□ -0.38
LINC00963-220ENST00000625171 INPPL1O15357 1258 aa12.66□□□□□ -0.38
LINC00963-220ENST00000625171 XPOTO43592 962 aaKnown RBP12.66□□□□□ -0.38
LINC00963-220ENST00000625171 MYCNP04198 464 aaPredicted RBP12.66□□□□□ -0.38
LINC00963-220ENST00000625171 CCDC175P0C221 793 aa12.66□□□□□ -0.38
LINC00963-220ENST00000625171 TMEM191BP0C7N4 346 aa12.66□□□□□ -0.38
LINC00963-220ENST00000625171 HARSP12081 509 aaKnown RBP12.66□□□□□ -0.38
LINC00963-220ENST00000625171 ZSCAN20P17040 1043 aaPredicted RBP12.66□□□□□ -0.38
LINC00963-220ENST00000625171 FAM189BP81408 668 aa12.66□□□□□ -0.38
LINC00963-220ENST00000625171 APBA1Q02410 837 aa12.66□□□□□ -0.38
LINC00963-220ENST00000625171 BMS1Q14692 1282 aaKnown RBP12.66□□□□□ -0.38
LINC00963-220ENST00000625171 ZNF618Q5T7W0 954 aa12.66□□□□□ -0.38
LINC00963-220ENST00000625171 SLC39A5Q6ZMH5 540 aa12.66□□□□□ -0.38
LINC00963-220ENST00000625171 CDR2LQ86X02 465 aaPredicted RBP12.66□□□□□ -0.38
LINC00963-220ENST00000625171 TDHQ8IZJ6 230 aa12.66□□□□□ -0.38
LINC00963-220ENST00000625171 TXLNBQ8N3L3 684 aa12.66□□□□□ -0.38
LINC00963-220ENST00000625171 SMG8Q8ND04 991 aaKnown RBP12.66□□□□□ -0.38
LINC00963-220ENST00000625171 RSPH1Q8WYR4 309 aa12.66□□□□□ -0.38
LINC00963-220ENST00000625171 KREMEN1Q96MU8 473 aa12.66□□□□□ -0.38
LINC00963-220ENST00000625171 FTHL17Q9BXU8 183 aa12.66□□□□□ -0.38
LINC00963-220ENST00000625171 EIF2AQ9BY44 585 aaKnown RBP12.66□□□□□ -0.38
LINC00963-220ENST00000625171 IMPG2Q9BZV3 1241 aa12.66□□□□□ -0.38
LINC00963-220ENST00000625171 TRPV6Q9H1D0 765 aa12.66□□□□□ -0.38
LINC00963-220ENST00000625171 AGO3Q9H9G7 860 aaKnown RBP12.66□□□□□ -0.38
LINC00963-220ENST00000625171 UBN1Q9NPG3 1134 aa12.66□□□□□ -0.38
LINC00963-220ENST00000625171 C1orf112Q9NSG2 853 aa12.66□□□□□ -0.38
LINC00963-220ENST00000625171 MTMR10Q9NXD2 777 aa12.66□□□□□ -0.38
LINC00963-220ENST00000625171 GIT1Q9Y2X7 761 aa12.66□□□□□ -0.38
LINC00963-220ENST00000625171 KIF2AO00139 706 aaPredicted RBP12.65□□□□□ -0.38
LINC00963-220ENST00000625171 FOXN3O00409 490 aaPredicted RBP12.65□□□□□ -0.38
LINC00963-220ENST00000625171 TLR3O15455 904 aaKnown RBP12.65□□□□□ -0.38
LINC00963-220ENST00000625171 PHACTR2O75167 634 aa12.65□□□□□ -0.38
LINC00963-220ENST00000625171 SELPP16109 830 aa12.65□□□□□ -0.38
LINC00963-220ENST00000625171 PAX3P23760 479 aa12.65□□□□□ -0.38
LINC00963-220ENST00000625171 BPIFB4P59827 614 aa12.65□□□□□ -0.38
LINC00963-220ENST00000625171 KLHL30Q0D2K2 578 aa12.65□□□□□ -0.38
LINC00963-220ENST00000625171 BIRC3Q13489 604 aa12.65□□□□□ -0.38
LINC00963-220ENST00000625171 RAPGEF1Q13905 1077 aa12.65□□□□□ -0.38
LINC00963-220ENST00000625171 TMEM132DQ14C87 1099 aa12.65□□□□□ -0.38
LINC00963-220ENST00000625171 ASIC2Q16515 512 aa12.65□□□□□ -0.38
LINC00963-220ENST00000625171 SLC18A3Q16572 532 aa12.65□□□□□ -0.38
LINC00963-220ENST00000625171 JADE1Q6IE81 842 aa12.65□□□□□ -0.38
LINC00963-220ENST00000625171 ARHGEF19Q8IW93 802 aa12.65□□□□□ -0.38
LINC00963-220ENST00000625171 REXO1L1PQ8IX06 675 aa12.65□□□□□ -0.38
LINC00963-220ENST00000625171 C7orf61Q8IZ16 206 aa12.65□□□□□ -0.38
LINC00963-220ENST00000625171 TTC39CQ8N584 583 aa12.65□□□□□ -0.38
LINC00963-220ENST00000625171 LRRC52Q8N7C0 313 aa12.65□□□□□ -0.38
LINC00963-220ENST00000625171 UBR7Q8N806 425 aa12.65□□□□□ -0.38
LINC00963-220ENST00000625171 C1orf127Q8N9H9 656 aa12.65□□□□□ -0.38
LINC00963-220ENST00000625171 SLC30A5Q8TAD4 765 aa12.65□□□□□ -0.38
LINC00963-220ENST00000625171 DIS3LQ8TF46 1054 aaKnown RBP12.65□□□□□ -0.38
LINC00963-220ENST00000625171 TRIM6Q9C030 488 aaPredicted RBP12.65□□□□□ -0.38
LINC00963-220ENST00000625171 MTMR12Q9C0I1 747 aa12.65□□□□□ -0.38
LINC00963-220ENST00000625171 FAM105AQ9NUU6 356 aa12.65□□□□□ -0.38
LINC00963-220ENST00000625171 SNTG2Q9NY99 539 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms