RNA–Protein interactions for RNA: ENST00000622697.4

GABRB3-215, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 5 BASIC

Gene GABRB3, Length 5,876 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-215ENST00000622697 TRMT10CQ7L0Y3 403 aaKnown RBP17.06■□□□□ 0.32
GABRB3-215ENST00000622697 KDELC2Q7Z4H8 507 aa17.06■□□□□ 0.32
GABRB3-215ENST00000622697 CBWD2Q8IUF1 395 aa17.06■□□□□ 0.32
GABRB3-215ENST00000622697 SLC24A3Q9HC58 644 aa17.06■□□□□ 0.32
GABRB3-215ENST00000622697 TMEM8AQ9HCN3 771 aa17.06■□□□□ 0.32
GABRB3-215ENST00000622697 CCDC78A2IDD5 438 aa17.05■□□□□ 0.32
GABRB3-215ENST00000622697 BMP6P22004 513 aa17.05■□□□□ 0.32
GABRB3-215ENST00000622697 SIK2Q9H0K1 926 aa17.05■□□□□ 0.32
GABRB3-215ENST00000622697 ZNRF3Q9ULT6 936 aa17.05■□□□□ 0.32
GABRB3-215ENST00000622697 COILP38432 576 aaPredicted RBP17.05■□□□□ 0.32
GABRB3-215ENST00000622697 RPS6P62753 249 aaKnown RBP17.05■□□□□ 0.32
GABRB3-215ENST00000622697 AGBL2Q5U5Z8 902 aa17.05■□□□□ 0.32
GABRB3-215ENST00000622697 CDH16O75309 829 aa17.05■□□□□ 0.32
GABRB3-215ENST00000622697 RASSF3Q86WH2 238 aa17.05■□□□□ 0.32
GABRB3-215ENST00000622697 MKNK1Q9BUB5 465 aa17.05■□□□□ 0.32
GABRB3-215ENST00000622697 TARS2Q9BW92 718 aaKnown RBP17.05■□□□□ 0.32
GABRB3-215ENST00000622697 FSD1LQ9BXM9 530 aa17.05■□□□□ 0.32
GABRB3-215ENST00000622697 ATP9BO43861 1147 aa17.05■□□□□ 0.32
GABRB3-215ENST00000622697 TXNP10599 105 aaKnown RBP17.05■□□□□ 0.32
GABRB3-215ENST00000622697 PDGFRAP16234 1089 aa17.05■□□□□ 0.32
GABRB3-215ENST00000622697 KDSRQ06136 332 aa17.05■□□□□ 0.32
GABRB3-215ENST00000622697 RSBN1LQ6PCB5 846 aaPredicted RBP17.05■□□□□ 0.32
GABRB3-215ENST00000622697 RNF135Q8IUD6 432 aa17.05■□□□□ 0.32
GABRB3-215ENST00000622697 CCDC124Q96CT7 223 aaKnown RBP17.05■□□□□ 0.32
GABRB3-215ENST00000622697 PRMT6Q96LA8 375 aaPredicted RBP17.05■□□□□ 0.32
GABRB3-215ENST00000622697 AGAP3Q96P47 875 aa17.05■□□□□ 0.32
GABRB3-215ENST00000622697 RAB6BQ9NRW1 208 aa17.05■□□□□ 0.32
GABRB3-215ENST00000622697 BAG5Q9UL15 447 aa17.05■□□□□ 0.32
GABRB3-215ENST00000622697 CHMP2BQ9UQN3 213 aa17.05■□□□□ 0.32
GABRB3-215ENST00000622697 USP15Q9Y4E8 981 aaPredicted RBP17.05■□□□□ 0.32
GABRB3-215ENST00000622697 GOLGA8QA0A0J9YX86 632 aa17.04■□□□□ 0.32
GABRB3-215ENST00000622697 E2F8A0AVK6 867 aa17.04■□□□□ 0.32
GABRB3-215ENST00000622697 GOLGA8OA6NCC3 632 aa17.04■□□□□ 0.32
GABRB3-215ENST00000622697 GOLGA8NF8WBI6 632 aa17.04■□□□□ 0.32
GABRB3-215ENST00000622697 GTF2H1P32780 548 aa17.04■□□□□ 0.32
GABRB3-215ENST00000622697 KIF19Q2TAC6 998 aa17.04■□□□□ 0.32
GABRB3-215ENST00000622697 AP1ARQ63HQ0 302 aa17.04■□□□□ 0.32
GABRB3-215ENST00000622697 CYP2W1Q8TAV3 490 aa17.04■□□□□ 0.32
GABRB3-215ENST00000622697 FAM151AQ8WW52 585 aa17.04■□□□□ 0.32
GABRB3-215ENST00000622697 RIT2Q99578 217 aa17.04■□□□□ 0.32
GABRB3-215ENST00000622697 MOV10L1Q9BXT6 1211 aaKnown RBP17.04■□□□□ 0.32
GABRB3-215ENST00000622697 APOL1O14791 398 aa17.04■□□□□ 0.32
GABRB3-215ENST00000622697 CLGNO14967 610 aa17.04■□□□□ 0.32
GABRB3-215ENST00000622697 FOXD4Q12950 439 aaPredicted RBP17.04■□□□□ 0.32
GABRB3-215ENST00000622697 KRT80Q6KB66 452 aa17.04■□□□□ 0.32
GABRB3-215ENST00000622697 EPS8L3Q8TE67 593 aaKnown RBP17.04■□□□□ 0.32
GABRB3-215ENST00000622697 DUSP9Q99956 384 aaKnown RBP17.04■□□□□ 0.32
GABRB3-215ENST00000622697 TEX13BQ9BXU2 312 aa17.04■□□□□ 0.32
GABRB3-215ENST00000622697 PCDHB2Q9Y5E7 798 aa17.04■□□□□ 0.32
GABRB3-215ENST00000622697 DDTLA6NHG4 134 aaPredicted RBP17.04■□□□□ 0.32
GABRB3-215ENST00000622697 GNGT2O14610 69 aa17.04■□□□□ 0.32
GABRB3-215ENST00000622697 TYK2P29597 1187 aa17.04■□□□□ 0.32
GABRB3-215ENST00000622697 KPNA2P52292 529 aaKnown RBP17.04■□□□□ 0.32
GABRB3-215ENST00000622697 SERPINI1Q99574 410 aa17.04■□□□□ 0.32
GABRB3-215ENST00000622697 XPO7Q9UIA9 1087 aaKnown RBP17.04■□□□□ 0.32
GABRB3-215ENST00000622697 SNX9Q9Y5X1 595 aa17.04■□□□□ 0.32
GABRB3-215ENST00000622697 MOCS2O96007 188 aaPredicted RBP17.04■□□□□ 0.32
GABRB3-215ENST00000622697 BRD2P25440 801 aaKnown RBP17.04■□□□□ 0.32
GABRB3-215ENST00000622697 ALDH18A1P54886 795 aaKnown RBP17.04■□□□□ 0.32
GABRB3-215ENST00000622697 PID1Q7Z2X4 250 aa17.04■□□□□ 0.32
GABRB3-215ENST00000622697 DTX3LQ8TDB6 740 aa17.04■□□□□ 0.32
GABRB3-215ENST00000622697 ATG4CQ96DT6 458 aa17.04■□□□□ 0.32
GABRB3-215ENST00000622697 MAGEA4P43358 317 aa17.04■□□□□ 0.32
GABRB3-215ENST00000622697 TMEM62Q0P6H9 643 aa17.04■□□□□ 0.32
GABRB3-215ENST00000622697 CNOT7Q9UIV1 285 aaKnown RBP17.04■□□□□ 0.32
GABRB3-215ENST00000622697 SPATA31D1Q6ZQQ2 1576 aa17.04■□□□□ 0.32
GABRB3-215ENST00000622697 CFAP73A6NFT4 308 aa17.03■□□□□ 0.32
GABRB3-215ENST00000622697 LARP7Q4G0J3 582 aaKnown RBP eCLIP17.03■□□□□ 0.32
GABRB3-215ENST00000622697 UBN1Q9NPG3 1134 aa17.03■□□□□ 0.32
GABRB3-215ENST00000622697 EFNA5P52803 228 aa17.03■□□□□ 0.32
GABRB3-215ENST00000622697 GPAT2Q6NUI2 795 aa17.03■□□□□ 0.32
GABRB3-215ENST00000622697 SLC20A1Q8WUM9 679 aa17.03■□□□□ 0.32
GABRB3-215ENST00000622697 RMDN2Q96LZ7 410 aa17.03■□□□□ 0.32
GABRB3-215ENST00000622697 TIPINQ9BVW5 301 aa17.03■□□□□ 0.32
GABRB3-215ENST00000622697 STOML1Q9UBI4 398 aa17.03■□□□□ 0.32
GABRB3-215ENST00000622697 FAM107AO95990 144 aa17.03■□□□□ 0.32
GABRB3-215ENST00000622697 KLC3Q6P597 504 aa17.03■□□□□ 0.32
GABRB3-215ENST00000622697 LCA5Q86VQ0 697 aa17.03■□□□□ 0.32
GABRB3-215ENST00000622697 LPAR1Q92633 364 aa17.03■□□□□ 0.32
GABRB3-215ENST00000622697 ELP3Q9H9T3 547 aa17.03■□□□□ 0.32
GABRB3-215ENST00000622697 MID2Q9UJV3 735 aa17.03■□□□□ 0.32
GABRB3-215ENST00000622697 PNMA3Q9UL41 463 aa17.03■□□□□ 0.32
GABRB3-215ENST00000622697 TBX20Q9UMR3 447 aa17.03■□□□□ 0.32
GABRB3-215ENST00000622697 ENO1P06733 434 aaKnown RBP17.03■□□□□ 0.32
GABRB3-215ENST00000622697 FIGNQ5HY92 759 aa17.03■□□□□ 0.32
GABRB3-215ENST00000622697 SLC13A5Q86YT5 568 aaPredicted RBP17.03■□□□□ 0.32
GABRB3-215ENST00000622697 UBA3Q8TBC4 463 aa17.03■□□□□ 0.32
GABRB3-215ENST00000622697 ERP27Q96DN0 273 aa17.03■□□□□ 0.32
GABRB3-215ENST00000622697 PNMA5Q96PV4 448 aa17.03■□□□□ 0.32
GABRB3-215ENST00000622697 LCMT1Q9UIC8 334 aa17.03■□□□□ 0.32
GABRB3-215ENST00000622697 PDGFRBP09619 1106 aa17.03■□□□□ 0.32
GABRB3-215ENST00000622697 ORC1Q13415 861 aa17.03■□□□□ 0.32
GABRB3-215ENST00000622697 OSBPL1AQ9BXW6 950 aa17.03■□□□□ 0.32
GABRB3-215ENST00000622697 CYTH3O43739 400 aa17.02■□□□□ 0.32
GABRB3-215ENST00000622697 LMNAP02545 664 aaKnown RBP17.02■□□□□ 0.32
GABRB3-215ENST00000622697 EVX2Q03828 476 aa17.02■□□□□ 0.32
GABRB3-215ENST00000622697 YWHAHQ04917 246 aaPredicted RBP17.02■□□□□ 0.32
GABRB3-215ENST00000622697 MUM1L1Q5H9M0 696 aa17.02■□□□□ 0.32
GABRB3-215ENST00000622697 TRPM8Q7Z2W7 1104 aa17.02■□□□□ 0.32
GABRB3-215ENST00000622697 VGLL2Q8N8G2 317 aa17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms