RNA–Protein interactions for RNA: ENST00000622138.4

TRIM49B-202, Transcript of tripartite motif containing 49B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM49B, Length 2,162 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49B-202ENST00000622138 GNA11P29992 359 aa7.95□□□□□ -1.14
TRIM49B-202ENST00000622138 PPP1R2P41236 205 aa7.95□□□□□ -1.14
TRIM49B-202ENST00000622138 TMED10P49755 219 aaKnown RBP7.95□□□□□ -1.14
TRIM49B-202ENST00000622138 FXR2P51116 673 aaKnown RBP eCLIP7.95□□□□□ -1.14
TRIM49B-202ENST00000622138 DNA2P51530 1060 aa7.95□□□□□ -1.14
TRIM49B-202ENST00000622138 EIF6P56537 245 aaKnown RBP7.95□□□□□ -1.14
TRIM49B-202ENST00000622138 STRN3Q13033 797 aa7.95□□□□□ -1.14
TRIM49B-202ENST00000622138 AUHQ13825 339 aaKnown RBP7.95□□□□□ -1.14
TRIM49B-202ENST00000622138 LPIN1Q14693 890 aa7.95□□□□□ -1.14
TRIM49B-202ENST00000622138 FAM98CQ17RN3 349 aaKnown RBP7.95□□□□□ -1.14
TRIM49B-202ENST00000622138 IZUMO2Q6UXV1 221 aa7.95□□□□□ -1.14
TRIM49B-202ENST00000622138 SFR1Q86XK3 245 aa7.95□□□□□ -1.14
TRIM49B-202ENST00000622138 GUF1Q8N442 669 aaKnown RBP7.95□□□□□ -1.14
TRIM49B-202ENST00000622138 SNX29Q8TEQ0 813 aa7.95□□□□□ -1.14
TRIM49B-202ENST00000622138 USP33Q8TEY7 942 aa7.95□□□□□ -1.14
TRIM49B-202ENST00000622138 ARHGEF2Q92974 986 aaKnown RBP7.95□□□□□ -1.14
TRIM49B-202ENST00000622138 DNAJC1Q96KC8 554 aaKnown RBP7.95□□□□□ -1.14
TRIM49B-202ENST00000622138 PRICKLE1Q96MT3 831 aaPredicted RBP7.95□□□□□ -1.14
TRIM49B-202ENST00000622138 RUNDC3BQ96NL0 473 aa7.95□□□□□ -1.14
TRIM49B-202ENST00000622138 CCT7Q99832 543 aa7.95□□□□□ -1.14
TRIM49B-202ENST00000622138 DDX47Q9H0S4 455 aaKnown RBP7.95□□□□□ -1.14
TRIM49B-202ENST00000622138 ZDHHC18Q9NUE0 388 aa7.95□□□□□ -1.14
TRIM49B-202ENST00000622138 PLK2Q9NYY3 685 aa7.95□□□□□ -1.14
TRIM49B-202ENST00000622138 STK17AQ9UEE5 414 aa7.95□□□□□ -1.14
TRIM49B-202ENST00000622138 CCPG1Q9ULG6 757 aa7.95□□□□□ -1.14
TRIM49B-202ENST00000622138 RABL2BQ9UNT1 228 aa7.95□□□□□ -1.14
TRIM49B-202ENST00000622138 N6AMT1Q9Y5N5 214 aa7.95□□□□□ -1.14
TRIM49B-202ENST00000622138 ABCB11O95342 1321 aa7.95□□□□□ -1.14
TRIM49B-202ENST00000622138 ARFGEF1Q9Y6D6 1849 aa7.95□□□□□ -1.14
TRIM49B-202ENST00000622138 PVALEFA0A1B0GWK0 134 aa7.94□□□□□ -1.14
TRIM49B-202ENST00000622138 ESYT2A0FGR8 921 aa7.94□□□□□ -1.14
TRIM49B-202ENST00000622138 SMIM23A6NLE4 172 aa7.94□□□□□ -1.14
TRIM49B-202ENST00000622138 F8W8V4 182 aa7.94□□□□□ -1.14
TRIM49B-202ENST00000622138 KRIT1O00522 736 aa7.94□□□□□ -1.14
TRIM49B-202ENST00000622138 ADCY3O60266 1144 aa7.94□□□□□ -1.14
TRIM49B-202ENST00000622138 OPHN1O60890 802 aa7.94□□□□□ -1.14
TRIM49B-202ENST00000622138 ZPR1O75312 459 aa7.94□□□□□ -1.14
TRIM49B-202ENST00000622138 RPS6KA4O75676 772 aa7.94□□□□□ -1.14
TRIM49B-202ENST00000622138 HOXD11P31277 338 aaPredicted RBP7.94□□□□□ -1.14
TRIM49B-202ENST00000622138 STX2P32856 288 aa7.94□□□□□ -1.14
TRIM49B-202ENST00000622138 GRIA2P42262 883 aa7.94□□□□□ -1.14
TRIM49B-202ENST00000622138 NOVP48745 357 aa7.94□□□□□ -1.14
TRIM49B-202ENST00000622138 TNNI2P48788 182 aa7.94□□□□□ -1.14
TRIM49B-202ENST00000622138 VPS41P49754 854 aa7.94□□□□□ -1.14
TRIM49B-202ENST00000622138 ADCY7P51828 1080 aa7.94□□□□□ -1.14
TRIM49B-202ENST00000622138 GSTO1P78417 241 aa7.94□□□□□ -1.14
TRIM49B-202ENST00000622138 XIAPP98170 497 aa7.94□□□□□ -1.14
TRIM49B-202ENST00000622138 AMPD3Q01432 767 aa7.94□□□□□ -1.14
TRIM49B-202ENST00000622138 PFKPQ01813 784 aa7.94□□□□□ -1.14
TRIM49B-202ENST00000622138 COASYQ13057 564 aa7.94□□□□□ -1.14
TRIM49B-202ENST00000622138 GRAPQ13588 217 aa7.94□□□□□ -1.14
TRIM49B-202ENST00000622138 BORAQ6PGQ7 559 aa7.94□□□□□ -1.14
TRIM49B-202ENST00000622138 VSTM1Q6UX27 236 aa7.94□□□□□ -1.14
TRIM49B-202ENST00000622138 ARHGEF18Q6ZSZ5 1173 aa7.94□□□□□ -1.14
TRIM49B-202ENST00000622138 BARGINQ6ZT62 677 aa7.94□□□□□ -1.14
TRIM49B-202ENST00000622138 SATL1Q86VE3 508 aa7.94□□□□□ -1.14
TRIM49B-202ENST00000622138 ARHGAP24Q8N264 748 aa7.94□□□□□ -1.14
TRIM49B-202ENST00000622138 FAM133AQ8N9E0 248 aa7.94□□□□□ -1.14
TRIM49B-202ENST00000622138 GRAPLQ8TC17 118 aaPredicted RBP7.94□□□□□ -1.14
TRIM49B-202ENST00000622138 DNAJC19Q96DA6 116 aa7.94□□□□□ -1.14
TRIM49B-202ENST00000622138 CLIP3Q96DZ5 547 aa7.94□□□□□ -1.14
TRIM49B-202ENST00000622138 SRPK1Q96SB4 655 aaKnown RBP7.94□□□□□ -1.14
TRIM49B-202ENST00000622138 STK33Q9BYT3 514 aa7.94□□□□□ -1.14
TRIM49B-202ENST00000622138 CCDC113Q9H0I3 377 aa7.94□□□□□ -1.14
TRIM49B-202ENST00000622138 RETREG1Q9H6L5 497 aa7.94□□□□□ -1.14
TRIM49B-202ENST00000622138 RIOX1Q9H6W3 641 aa7.94□□□□□ -1.14
TRIM49B-202ENST00000622138 TRPC7Q9HCX4 862 aa7.94□□□□□ -1.14
TRIM49B-202ENST00000622138 CLIC5Q9NZA1 410 aa7.94□□□□□ -1.14
TRIM49B-202ENST00000622138 PARP2Q9UGN5 583 aa7.94□□□□□ -1.14
TRIM49B-202ENST00000622138 PPP1R9AQ9ULJ8 1098 aa7.94□□□□□ -1.14
TRIM49B-202ENST00000622138 TTC7AQ9ULT0 858 aaPredicted RBP7.94□□□□□ -1.14
TRIM49B-202ENST00000622138 GIT1Q9Y2X7 761 aa7.94□□□□□ -1.14
TRIM49B-202ENST00000622138 TELO2Q9Y4R8 837 aa7.94□□□□□ -1.14
TRIM49B-202ENST00000622138 TIMM22Q9Y584 194 aa7.94□□□□□ -1.14
TRIM49B-202ENST00000622138 GPC6Q9Y625 555 aaPredicted RBP7.94□□□□□ -1.14
TRIM49B-202ENST00000622138 BTAF1O14981 1849 aa7.94□□□□□ -1.14
TRIM49B-202ENST00000622138 NPHP3-ACAD11A0A0J9YXS1 232 aa7.94□□□□□ -1.14
TRIM49B-202ENST00000622138 IQCA1LA6NCM1 817 aa7.94□□□□□ -1.14
TRIM49B-202ENST00000622138 VILLO15195 856 aa7.94□□□□□ -1.14
TRIM49B-202ENST00000622138 CCDC22O60826 627 aa7.94□□□□□ -1.14
TRIM49B-202ENST00000622138 RNASEH1O60930 286 aaKnown RBP7.94□□□□□ -1.14
TRIM49B-202ENST00000622138 SLURP2P0DP57 97 aa7.94□□□□□ -1.14
TRIM49B-202ENST00000622138 AKR1B1P15121 316 aa7.94□□□□□ -1.14
TRIM49B-202ENST00000622138 RPL5P46777 297 aaKnown RBP7.94□□□□□ -1.14
TRIM49B-202ENST00000622138 DRG2P55039 364 aaKnown RBP7.94□□□□□ -1.14
TRIM49B-202ENST00000622138 POU5F1Q01860 360 aaKnown RBP7.94□□□□□ -1.14
TRIM49B-202ENST00000622138 LRRC63Q05C16 580 aa7.94□□□□□ -1.14
TRIM49B-202ENST00000622138 KLRC3Q07444 240 aa7.94□□□□□ -1.14
TRIM49B-202ENST00000622138 CDC16Q13042 620 aa7.94□□□□□ -1.14
TRIM49B-202ENST00000622138 MOGSQ13724 837 aa7.94□□□□□ -1.14
TRIM49B-202ENST00000622138 NDUFA5Q16718 116 aa7.94□□□□□ -1.14
TRIM49B-202ENST00000622138 KCTD19Q17RG1 926 aaPredicted RBP7.94□□□□□ -1.14
TRIM49B-202ENST00000622138 CERKLQ49MI3 558 aaPredicted RBP7.94□□□□□ -1.14
TRIM49B-202ENST00000622138 MEX3CQ5U5Q3 659 aaKnown RBP7.94□□□□□ -1.14
TRIM49B-202ENST00000622138 DUPD1Q68J44 220 aa7.94□□□□□ -1.14
TRIM49B-202ENST00000622138 RFWD3Q6PCD5 774 aa7.94□□□□□ -1.14
TRIM49B-202ENST00000622138 DHRS4L2Q6PKH6 230 aa7.94□□□□□ -1.14
TRIM49B-202ENST00000622138 TPTE2Q6XPS3 522 aa7.94□□□□□ -1.14
TRIM49B-202ENST00000622138 PPP1R21Q6ZMI0 780 aa7.94□□□□□ -1.14
TRIM49B-202ENST00000622138 CEP70Q8NHQ1 597 aa7.94□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms