RNA–Protein interactions for RNA: ENST00000621245.4

CPNE3-210, Transcript of copine 3, humanhuman

TSL 5

Gene CPNE3, Length 581 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-210ENST00000621245 GPR152Q8TDT2 470 aa12.56□□□□□ -0.4
CPNE3-210ENST00000621245 HDAC7Q8WUI4 952 aa12.56□□□□□ -0.4
CPNE3-210ENST00000621245 FGF14Q92915 247 aa12.56□□□□□ -0.4
CPNE3-210ENST00000621245 TMX3Q96JJ7 454 aa12.56□□□□□ -0.4
CPNE3-210ENST00000621245 SNX27Q96L92 541 aa12.56□□□□□ -0.4
CPNE3-210ENST00000621245 TMUB1Q9BVT8 246 aa12.56□□□□□ -0.4
CPNE3-210ENST00000621245 MFSD1Q9H3U5 465 aa12.56□□□□□ -0.4
CPNE3-210ENST00000621245 PCDHGA10Q9Y5H3 936 aa12.56□□□□□ -0.4
CPNE3-210ENST00000621245 NUMBLQ9Y6R0 609 aa12.56□□□□□ -0.4
CPNE3-210ENST00000621245 TCHHQ07283 1943 aa12.56□□□□□ -0.4
CPNE3-210ENST00000621245 SCN1AP35498 2009 aa12.55□□□□□ -0.4
CPNE3-210ENST00000621245 ANHXE9PGG2 379 aa12.55□□□□□ -0.4
CPNE3-210ENST00000621245 TMEM189-UBE2V1I3L0A0 370 aa12.55□□□□□ -0.4
CPNE3-210ENST00000621245 K7ERI5 159 aa12.55□□□□□ -0.4
CPNE3-210ENST00000621245 GFRA3O60609 400 aa12.55□□□□□ -0.4
CPNE3-210ENST00000621245 B3GAT3O94766 335 aa12.55□□□□□ -0.4
CPNE3-210ENST00000621245 AOC1P19801 751 aa12.55□□□□□ -0.4
CPNE3-210ENST00000621245 FSHRP23945 695 aa12.55□□□□□ -0.4
CPNE3-210ENST00000621245 GJB2P29033 226 aa12.55□□□□□ -0.4
CPNE3-210ENST00000621245 CLCN5P51795 746 aa12.55□□□□□ -0.4
CPNE3-210ENST00000621245 EFNA5P52803 228 aa12.55□□□□□ -0.4
CPNE3-210ENST00000621245 SLC12A3P55017 1021 aa12.55□□□□□ -0.4
CPNE3-210ENST00000621245 GRIN1Q05586 938 aa12.55□□□□□ -0.4
CPNE3-210ENST00000621245 XKR4Q5GH76 650 aa12.55□□□□□ -0.4
CPNE3-210ENST00000621245 KRT79Q5XKE5 535 aa12.55□□□□□ -0.4
CPNE3-210ENST00000621245 PARM1Q6UWI2 310 aa12.55□□□□□ -0.4
CPNE3-210ENST00000621245 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.55□□□□□ -0.4
CPNE3-210ENST00000621245 DTHD1Q6ZMT9 781 aa12.55□□□□□ -0.4
CPNE3-210ENST00000621245 PRRX2Q99811 253 aa12.55□□□□□ -0.4
CPNE3-210ENST00000621245 KMT5AQ9NQR1 393 aa12.55□□□□□ -0.4
CPNE3-210ENST00000621245 IGSF9Q9P2J2 1179 aa12.55□□□□□ -0.4
CPNE3-210ENST00000621245 MTRRQ9UBK8 725 aa12.55□□□□□ -0.4
CPNE3-210ENST00000621245 TUBGCP4Q9UGJ1 667 aa12.55□□□□□ -0.4
CPNE3-210ENST00000621245 METRNQ9UJH8 293 aa12.55□□□□□ -0.4
CPNE3-210ENST00000621245 FBXL21Q9UKT6 434 aa12.55□□□□□ -0.4
CPNE3-210ENST00000621245 DNM3Q9UQ16 869 aa12.55□□□□□ -0.4
CPNE3-210ENST00000621245 CDY1Q9Y6F8 540 aa12.55□□□□□ -0.4
CPNE3-210ENST00000621245 VWA3AA6NCI4 1184 aa12.54□□□□□ -0.4
CPNE3-210ENST00000621245 EIF5BO60841 1220 aaKnown RBP12.54□□□□□ -0.4
CPNE3-210ENST00000621245 LRRN2O75325 713 aa12.54□□□□□ -0.4
CPNE3-210ENST00000621245 PRPHP41219 470 aa12.54□□□□□ -0.4
CPNE3-210ENST00000621245 CREMQ03060 361 aa12.54□□□□□ -0.4
CPNE3-210ENST00000621245 SPAG1Q07617 926 aa12.54□□□□□ -0.4
CPNE3-210ENST00000621245 DMP1Q13316 513 aaPredicted RBP12.54□□□□□ -0.4
CPNE3-210ENST00000621245 RAB33AQ14088 237 aa12.54□□□□□ -0.4
CPNE3-210ENST00000621245 RABEP1Q15276 862 aa12.54□□□□□ -0.4
CPNE3-210ENST00000621245 SLC5A9Q2M3M2 681 aa12.54□□□□□ -0.4
CPNE3-210ENST00000621245 TSR1Q2NL82 804 aaKnown RBP12.54□□□□□ -0.4
CPNE3-210ENST00000621245 TMEM119Q4V9L6 283 aa12.54□□□□□ -0.4
CPNE3-210ENST00000621245 ARSHQ5FYA8 562 aa12.54□□□□□ -0.4
CPNE3-210ENST00000621245 PPM1LQ5SGD2 360 aa12.54□□□□□ -0.4
CPNE3-210ENST00000621245 ZBTB41Q5SVQ8 909 aa12.54□□□□□ -0.4
CPNE3-210ENST00000621245 HYIQ5T013 277 aa12.54□□□□□ -0.4
CPNE3-210ENST00000621245 AXDND1Q5T1B0 1012 aaPredicted RBP12.54□□□□□ -0.4
CPNE3-210ENST00000621245 CYP26C1Q6V0L0 522 aa12.54□□□□□ -0.4
CPNE3-210ENST00000621245 FRMD5Q7Z6J6 570 aa12.54□□□□□ -0.4
CPNE3-210ENST00000621245 TMEM161BQ8NDZ6 487 aa12.54□□□□□ -0.4
CPNE3-210ENST00000621245 ING5Q8WYH8 240 aa12.54□□□□□ -0.4
CPNE3-210ENST00000621245 STAMQ92783 540 aa12.54□□□□□ -0.4
CPNE3-210ENST00000621245 MRPL4Q9BYD3 311 aaKnown RBP12.54□□□□□ -0.4
CPNE3-210ENST00000621245 TMEM134Q9H6X4 195 aa12.54□□□□□ -0.4
CPNE3-210ENST00000621245 ANKFY1Q9P2R3 1169 aa12.54□□□□□ -0.4
CPNE3-210ENST00000621245 POLIQ9UNA4 740 aa12.54□□□□□ -0.4
CPNE3-210ENST00000621245 KIF26AQ9ULI4 1882 aaPredicted RBP12.54□□□□□ -0.4
CPNE3-210ENST00000621245 PTPRZ1P23471 2315 aaPredicted RBP12.54□□□□□ -0.4
CPNE3-210ENST00000621245 WDR27A2RRH5 827 aa12.53□□□□□ -0.4
CPNE3-210ENST00000621245 PODXLO00592 558 aa12.53□□□□□ -0.4
CPNE3-210ENST00000621245 C1RP00736 705 aa12.53□□□□□ -0.4
CPNE3-210ENST00000621245 MAPTP10636 758 aaKnown RBP12.53□□□□□ -0.4
CPNE3-210ENST00000621245 SRFP11831 508 aa12.53□□□□□ -0.4
CPNE3-210ENST00000621245 GUCY2CP25092 1073 aa12.53□□□□□ -0.4
CPNE3-210ENST00000621245 GUCY2FP51841 1108 aa12.53□□□□□ -0.4
CPNE3-210ENST00000621245 ROR1Q01973 937 aa12.53□□□□□ -0.4
CPNE3-210ENST00000621245 VARS2Q5ST30 1063 aaKnown RBP12.53□□□□□ -0.4
CPNE3-210ENST00000621245 LIN9Q5TKA1 542 aa12.53□□□□□ -0.4
CPNE3-210ENST00000621245 DCLRE1AQ6PJP8 1040 aa12.53□□□□□ -0.4
CPNE3-210ENST00000621245 MPZL3Q6UWV2 235 aa12.53□□□□□ -0.4
CPNE3-210ENST00000621245 CCDC105Q8IYK2 499 aa12.53□□□□□ -0.4
CPNE3-210ENST00000621245 FGF13Q92913 245 aa12.53□□□□□ -0.4
CPNE3-210ENST00000621245 TBC1D17Q9HA65 648 aa12.53□□□□□ -0.4
CPNE3-210ENST00000621245 DNMT3BQ9UBC3 853 aaKnown RBP12.53□□□□□ -0.4
CPNE3-210ENST00000621245 DPP7Q9UHL4 492 aa12.53□□□□□ -0.4
CPNE3-210ENST00000621245 EP300Q09472 2414 aaPredicted RBP12.52□□□□□ -0.4
CPNE3-210ENST00000621245 PRR23AA6NEV1 266 aa12.52□□□□□ -0.41
CPNE3-210ENST00000621245 LAD1O00515 517 aa12.52□□□□□ -0.41
CPNE3-210ENST00000621245 SEC24AO95486 1093 aa12.52□□□□□ -0.41
CPNE3-210ENST00000621245 DCNP07585 359 aaKnown RBP12.52□□□□□ -0.41
CPNE3-210ENST00000621245 PLA2G4BP0C869 781 aa12.52□□□□□ -0.41
CPNE3-210ENST00000621245 CXCL8P10145 99 aa12.52□□□□□ -0.41
CPNE3-210ENST00000621245 MCF2P10911 925 aa12.52□□□□□ -0.41
CPNE3-210ENST00000621245 GLULP15104 373 aa12.52□□□□□ -0.41
CPNE3-210ENST00000621245 KCNE1P15382 129 aa12.52□□□□□ -0.41
CPNE3-210ENST00000621245 CEBPBP17676 345 aa12.52□□□□□ -0.41
CPNE3-210ENST00000621245 TNFSF9P41273 254 aa12.52□□□□□ -0.41
CPNE3-210ENST00000621245 SLC10A6Q3KNW5 377 aa12.52□□□□□ -0.41
CPNE3-210ENST00000621245 ELMSAN1Q6PJG2 1045 aa12.52□□□□□ -0.41
CPNE3-210ENST00000621245 NPAS3Q8IXF0 933 aa12.52□□□□□ -0.41
CPNE3-210ENST00000621245 SYT2Q8N9I0 419 aaPredicted RBP12.52□□□□□ -0.41
CPNE3-210ENST00000621245 DTWD2Q8NBA8 298 aa12.52□□□□□ -0.41
CPNE3-210ENST00000621245 DRC1Q96MC2 740 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms