RNA–Protein interactions for RNA: ENST00000620854.4

NEDD9-216, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 5 BASIC

Gene NEDD9, Length 4,086 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-216ENST00000620854 K7ENM7 598 aa7.38□□□□□ -1.23
NEDD9-216ENST00000620854 MEIS2O14770 477 aa7.38□□□□□ -1.23
NEDD9-216ENST00000620854 KRT19P08727 400 aa7.38□□□□□ -1.23
NEDD9-216ENST00000620854 ZSCAN5DPP0CG00 497 aa7.38□□□□□ -1.23
NEDD9-216ENST00000620854 TAC1P20366 129 aa7.38□□□□□ -1.23
NEDD9-216ENST00000620854 PTDSS1P48651 473 aaKnown RBP7.38□□□□□ -1.23
NEDD9-216ENST00000620854 WDR4P57081 412 aaKnown RBP7.38□□□□□ -1.23
NEDD9-216ENST00000620854 IL9RQ01113 521 aa7.38□□□□□ -1.23
NEDD9-216ENST00000620854 NFIAQ12857 509 aa7.38□□□□□ -1.23
NEDD9-216ENST00000620854 TRPC3Q13507 836 aa7.38□□□□□ -1.23
NEDD9-216ENST00000620854 BLMHQ13867 455 aa7.38□□□□□ -1.23
NEDD9-216ENST00000620854 SDCCAG8Q86SQ7 713 aaPredicted RBP7.38□□□□□ -1.23
NEDD9-216ENST00000620854 NOP9Q86U38 636 aaKnown RBP7.38□□□□□ -1.23
NEDD9-216ENST00000620854 HERPUD2Q9BSE4 406 aa7.38□□□□□ -1.23
NEDD9-216ENST00000620854 PCYOX1Q9UHG3 505 aa7.38□□□□□ -1.23
NEDD9-216ENST00000620854 STK24Q9Y6E0 443 aa7.38□□□□□ -1.23
NEDD9-216ENST00000620854 TESPA1A2RU30 521 aaPredicted RBP7.38□□□□□ -1.23
NEDD9-216ENST00000620854 TMEM150BA6NC51 233 aa7.38□□□□□ -1.23
NEDD9-216ENST00000620854 DKC1O60832 514 aaKnown RBP eCLIP7.38□□□□□ -1.23
NEDD9-216ENST00000620854 BANF1O75531 89 aa7.38□□□□□ -1.23
NEDD9-216ENST00000620854 TM4SF1P30408 202 aa7.38□□□□□ -1.23
NEDD9-216ENST00000620854 PEX5P50542 639 aa7.38□□□□□ -1.23
NEDD9-216ENST00000620854 DRG2P55039 364 aaKnown RBP7.38□□□□□ -1.23
NEDD9-216ENST00000620854 ORC2Q13416 577 aaPredicted RBP7.38□□□□□ -1.23
NEDD9-216ENST00000620854 ANO7Q6IWH7 933 aa7.38□□□□□ -1.23
NEDD9-216ENST00000620854 MTDHQ86UE4 582 aaKnown RBP7.38□□□□□ -1.23
NEDD9-216ENST00000620854 NLRX1Q86UT6 975 aa7.38□□□□□ -1.23
NEDD9-216ENST00000620854 FAM160B2Q86V87 743 aa7.38□□□□□ -1.23
NEDD9-216ENST00000620854 CPA5Q8WXQ8 436 aa7.38□□□□□ -1.23
NEDD9-216ENST00000620854 RILPQ96NA2 401 aa7.38□□□□□ -1.23
NEDD9-216ENST00000620854 PI4K2AQ9BTU6 479 aa7.38□□□□□ -1.23
NEDD9-216ENST00000620854 PAPOLBQ9NRJ5 636 aaKnown RBP7.38□□□□□ -1.23
NEDD9-216ENST00000620854 CHKBQ9Y259 395 aa7.38□□□□□ -1.23
NEDD9-216ENST00000620854 UBR2Q8IWV8 1755 aa7.38□□□□□ -1.23
NEDD9-216ENST00000620854 SNED1Q8TER0 1413 aa7.38□□□□□ -1.23
NEDD9-216ENST00000620854 EP400Q96L91 3159 aa7.38□□□□□ -1.23
NEDD9-216ENST00000620854 C2orf71A6NGG8 1288 aa7.38□□□□□ -1.23
NEDD9-216ENST00000620854 MIF4GDA9UHW6 222 aaKnown RBP7.38□□□□□ -1.23
NEDD9-216ENST00000620854 ENTPD3O75355 529 aa7.38□□□□□ -1.23
NEDD9-216ENST00000620854 GJB6O95452 261 aa7.38□□□□□ -1.23
NEDD9-216ENST00000620854 CALB2P22676 271 aa7.38□□□□□ -1.23
NEDD9-216ENST00000620854 RRM1P23921 792 aa7.38□□□□□ -1.23
NEDD9-216ENST00000620854 MAPK4P31152 587 aa7.38□□□□□ -1.23
NEDD9-216ENST00000620854 CPA2P48052 419 aa7.38□□□□□ -1.23
NEDD9-216ENST00000620854 CLK2P49760 499 aaKnown RBP7.38□□□□□ -1.23
NEDD9-216ENST00000620854 BFSP1Q12934 665 aa7.38□□□□□ -1.23
NEDD9-216ENST00000620854 TAF1BQ53T94 588 aaPredicted RBP7.38□□□□□ -1.23
NEDD9-216ENST00000620854 ARHGEF16Q5VV41 709 aa7.38□□□□□ -1.23
NEDD9-216ENST00000620854 CCDC62Q6P9F0 684 aa7.38□□□□□ -1.23
NEDD9-216ENST00000620854 RFWD3Q6PCD5 774 aa7.38□□□□□ -1.23
NEDD9-216ENST00000620854 SLC30A9Q6PML9 568 aa7.38□□□□□ -1.23
NEDD9-216ENST00000620854 ZC3H18Q86VM9 953 aaKnown RBP7.38□□□□□ -1.23
NEDD9-216ENST00000620854 PASD1Q8IV76 773 aa7.38□□□□□ -1.23
NEDD9-216ENST00000620854 CCDC110Q8TBZ0 833 aa7.38□□□□□ -1.23
NEDD9-216ENST00000620854 TEKT4Q8WW24 435 aa7.38□□□□□ -1.23
NEDD9-216ENST00000620854 RAB3IPQ96QF0 476 aaPredicted RBP7.38□□□□□ -1.23
NEDD9-216ENST00000620854 SAYSD1Q9NPB0 183 aa7.38□□□□□ -1.23
NEDD9-216ENST00000620854 NINJ2Q9NZG7 142 aa7.38□□□□□ -1.23
NEDD9-216ENST00000620854 DIS3Q9Y2L1 958 aaKnown RBP7.38□□□□□ -1.23
NEDD9-216ENST00000620854 PCDHAC2Q9Y5I4 1007 aa7.38□□□□□ -1.23
NEDD9-216ENST00000620854 AHDC1Q5TGY3 1603 aaPredicted RBP7.38□□□□□ -1.23
NEDD9-216ENST00000620854 NOP56O00567 594 aaKnown RBP7.37□□□□□ -1.23
NEDD9-216ENST00000620854 ETS1P14921 441 aa7.37□□□□□ -1.23
NEDD9-216ENST00000620854 CD58P19256 250 aa7.37□□□□□ -1.23
NEDD9-216ENST00000620854 NOP14P78316 857 aaKnown RBP7.37□□□□□ -1.23
NEDD9-216ENST00000620854 SPIRE1Q08AE8 756 aa7.37□□□□□ -1.23
NEDD9-216ENST00000620854 STRN3Q13033 797 aa7.37□□□□□ -1.23
NEDD9-216ENST00000620854 FAM102BQ5T8I3 360 aa7.37□□□□□ -1.23
NEDD9-216ENST00000620854 BTNL9Q6UXG8 535 aa7.37□□□□□ -1.23
NEDD9-216ENST00000620854 ANKMY2Q8IV38 441 aa7.37□□□□□ -1.23
NEDD9-216ENST00000620854 OLIG1Q8TAK6 271 aa7.37□□□□□ -1.23
NEDD9-216ENST00000620854 LRRC8CQ8TDW0 803 aa7.37□□□□□ -1.23
NEDD9-216ENST00000620854 SREK1Q8WXA9 508 aaKnown RBP7.37□□□□□ -1.23
NEDD9-216ENST00000620854 ACSF2Q96CM8 615 aaPredicted RBP7.37□□□□□ -1.23
NEDD9-216ENST00000620854 SERPINB12Q96P63 405 aa7.37□□□□□ -1.23
NEDD9-216ENST00000620854 RBM15Q96T37 977 aaKnown RBP eCLIP7.37□□□□□ -1.236e-7■■□□□ 13.6
NEDD9-216ENST00000620854 SH3GL3Q99963 347 aa7.37□□□□□ -1.23
NEDD9-216ENST00000620854 DENND2DQ9H6A0 471 aaPredicted RBP7.37□□□□□ -1.23
NEDD9-216ENST00000620854 RNPEPL1Q9HAU8 725 aa7.37□□□□□ -1.23
NEDD9-216ENST00000620854 LARSQ9P2J5 1176 aaKnown RBP7.37□□□□□ -1.23
NEDD9-216ENST00000620854 CORO1CQ9ULV4 474 aaPredicted RBP7.37□□□□□ -1.23
NEDD9-216ENST00000620854 ZNF148Q9UQR1 794 aa7.37□□□□□ -1.23
NEDD9-216ENST00000620854 PCDHA3Q9Y5H8 950 aa7.37□□□□□ -1.23
NEDD9-216ENST00000620854 A0A1B0GUL6 1792 aa7.37□□□□□ -1.23
NEDD9-216ENST00000620854 F5H6K3 240 aa7.37□□□□□ -1.23
NEDD9-216ENST00000620854 ZCCHC18P0CG32 403 aa7.37□□□□□ -1.23
NEDD9-216ENST00000620854 RPA3P35244 121 aaPredicted RBP7.37□□□□□ -1.23
NEDD9-216ENST00000620854 RCN2Q14257 317 aa7.37□□□□□ -1.23
NEDD9-216ENST00000620854 FASTKD3Q14CZ7 662 aaKnown RBP7.37□□□□□ -1.23
NEDD9-216ENST00000620854 RBBP5Q15291 538 aaKnown RBP7.37□□□□□ -1.23
NEDD9-216ENST00000620854 PKN2Q16513 984 aaKnown RBP7.37□□□□□ -1.23
NEDD9-216ENST00000620854 TSNAXIP1Q2TAA8 658 aa7.37□□□□□ -1.23
NEDD9-216ENST00000620854 KHDC1Q4VXA5 237 aaKnown RBP7.37□□□□□ -1.23
NEDD9-216ENST00000620854 HYIQ5T013 277 aa7.37□□□□□ -1.23
NEDD9-216ENST00000620854 LMBRD2Q68DH5 695 aaPredicted RBP7.37□□□□□ -1.23
NEDD9-216ENST00000620854 CDCA2Q69YH5 1023 aaPredicted RBP7.37□□□□□ -1.23
NEDD9-216ENST00000620854 PPP1R18Q6NYC8 613 aa7.37□□□□□ -1.23
NEDD9-216ENST00000620854 TRMT10CQ7L0Y3 403 aaKnown RBP7.37□□□□□ -1.23
NEDD9-216ENST00000620854 ZNF720Q7Z2F6 126 aa7.37□□□□□ -1.23
NEDD9-216ENST00000620854 NCAPG2Q86XI2 1143 aa7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms