RNA–Protein interactions for RNA: ENST00000620465.4

MALAT1-216, metastasis associated lung adenocarcinoma transcript 1, humanhuman

TSL 2

Gene MALAT1, Length 333 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MALAT1-216ENST00000620465 CDK5RAP1Q96SZ6 601 aaKnown RBP4.47□□□□□ -1.69
MALAT1-216ENST00000620465 LRFN3Q9BTN0 628 aa4.47□□□□□ -1.69
MALAT1-216ENST00000620465 NDC1Q9BTX1 674 aa4.47□□□□□ -1.69
MALAT1-216ENST00000620465 B3GNT5Q9BYG0 378 aa4.47□□□□□ -1.69
MALAT1-216ENST00000620465 PNPOQ9NVS9 261 aa4.47□□□□□ -1.69
MALAT1-216ENST00000620465 SIDT1Q9NXL6 827 aaKnown RBP4.47□□□□□ -1.69
MALAT1-216ENST00000620465 PNPLA7Q6ZV29 1317 aa4.46□□□□□ -1.69
MALAT1-216ENST00000620465 KRTAP23-1A1A580 65 aa4.46□□□□□ -1.7
MALAT1-216ENST00000620465 ITGB1P05556 798 aa4.46□□□□□ -1.7
MALAT1-216ENST00000620465 PRDX5P30044 214 aa4.46□□□□□ -1.7
MALAT1-216ENST00000620465 MAGEA10P43363 369 aaPredicted RBP4.46□□□□□ -1.7
MALAT1-216ENST00000620465 PIK3CGP48736 1102 aa4.46□□□□□ -1.7
MALAT1-216ENST00000620465 SCNN1GP51170 649 aa4.46□□□□□ -1.7
MALAT1-216ENST00000620465 AGFG1P52594 562 aaKnown RBP4.46□□□□□ -1.7
MALAT1-216ENST00000620465 NKX6-1P78426 367 aaPredicted RBP4.46□□□□□ -1.7
MALAT1-216ENST00000620465 EFEMP1Q12805 493 aa4.46□□□□□ -1.7
MALAT1-216ENST00000620465 PLS1Q14651 629 aa4.46□□□□□ -1.7
MALAT1-216ENST00000620465 UBXN2BQ14CS0 331 aa4.46□□□□□ -1.7
MALAT1-216ENST00000620465 NPNTQ6UXI9 565 aa4.46□□□□□ -1.7
MALAT1-216ENST00000620465 ZNF365Q70YC5 407 aa4.46□□□□□ -1.7
MALAT1-216ENST00000620465 CHST15Q7LFX5 561 aaPredicted RBP4.46□□□□□ -1.7
MALAT1-216ENST00000620465 SH2D3CQ8N5H7 860 aa4.46□□□□□ -1.7
MALAT1-216ENST00000620465 IL17RDQ8NFM7 739 aa4.46□□□□□ -1.7
MALAT1-216ENST00000620465 DVL3Q92997 716 aaPredicted RBP4.46□□□□□ -1.7
MALAT1-216ENST00000620465 TTC17Q96AE7 1141 aa4.46□□□□□ -1.7
MALAT1-216ENST00000620465 MNTQ99583 582 aa4.46□□□□□ -1.7
MALAT1-216ENST00000620465 FBXO34Q9NWN3 711 aa4.46□□□□□ -1.7
MALAT1-216ENST00000620465 AURKAIP1Q9NWT8 199 aaPredicted RBP4.46□□□□□ -1.7
MALAT1-216ENST00000620465 JKAMPQ9P055 326 aa4.46□□□□□ -1.7
MALAT1-216ENST00000620465 A0A088AWK7 358 aa4.45□□□□□ -1.7
MALAT1-216ENST00000620465 CDHR4A6H8M9 788 aa4.45□□□□□ -1.7
MALAT1-216ENST00000620465 CAPN8A6NHC0 703 aa4.45□□□□□ -1.7
MALAT1-216ENST00000620465 A6NNZ2 444 aa4.45□□□□□ -1.7
MALAT1-216ENST00000620465 CAND2O75155 1236 aa4.45□□□□□ -1.7
MALAT1-216ENST00000620465 SLC43A1O75387 559 aa4.45□□□□□ -1.7
MALAT1-216ENST00000620465 ZBED1O96006 694 aa4.45□□□□□ -1.7
MALAT1-216ENST00000620465 HRGP04196 525 aa4.45□□□□□ -1.7
MALAT1-216ENST00000620465 SBK3P0C264 359 aa4.45□□□□□ -1.7
MALAT1-216ENST00000620465 CHN2P52757 468 aa4.45□□□□□ -1.7
MALAT1-216ENST00000620465 GPSM2P81274 684 aa4.45□□□□□ -1.7
MALAT1-216ENST00000620465 FGL2Q14314 439 aa4.45□□□□□ -1.7
MALAT1-216ENST00000620465 RRP1BQ14684 758 aaKnown RBP4.45□□□□□ -1.7
MALAT1-216ENST00000620465 R3HDM1Q15032 1099 aaKnown RBP4.45□□□□□ -1.7
MALAT1-216ENST00000620465 CCDC93Q567U6 631 aa4.45□□□□□ -1.7
MALAT1-216ENST00000620465 CCSAPQ6IQ19 270 aaPredicted RBP4.45□□□□□ -1.7
MALAT1-216ENST00000620465 MED25Q71SY5 747 aa4.45□□□□□ -1.7
MALAT1-216ENST00000620465 FAM90A1Q86YD7 464 aa4.45□□□□□ -1.7
MALAT1-216ENST00000620465 PALM2Q8IXS6 379 aa4.45□□□□□ -1.7
MALAT1-216ENST00000620465 KIAA0319LQ8IZA0 1049 aa4.45□□□□□ -1.7
MALAT1-216ENST00000620465 AOPEPQ8N6M6 819 aa4.45□□□□□ -1.7
MALAT1-216ENST00000620465 PLBD2Q8NHP8 589 aa4.45□□□□□ -1.7
MALAT1-216ENST00000620465 TIFAQ96CG3 184 aa4.45□□□□□ -1.7
MALAT1-216ENST00000620465 PHACTR3Q96KR7 559 aa4.45□□□□□ -1.7
MALAT1-216ENST00000620465 KRTAP3-1Q9BYR8 98 aa4.45□□□□□ -1.7
MALAT1-216ENST00000620465 REXO4Q9GZR2 422 aaKnown RBP4.45□□□□□ -1.7
MALAT1-216ENST00000620465 MRPL46Q9H2W6 279 aaKnown RBP4.45□□□□□ -1.7
MALAT1-216ENST00000620465 ARMT1Q9H993 441 aa4.45□□□□□ -1.7
MALAT1-216ENST00000620465 SARS2Q9NP81 518 aaKnown RBP4.45□□□□□ -1.7
MALAT1-216ENST00000620465 RLIMQ9NVW2 624 aa4.45□□□□□ -1.7
MALAT1-216ENST00000620465 CFAP97Q9P2B7 532 aa4.45□□□□□ -1.7
MALAT1-216ENST00000620465 DRGXA6NNA5 263 aa4.44□□□□□ -1.7
MALAT1-216ENST00000620465 DIRC3C9JPN6 131 aa4.44□□□□□ -1.7
MALAT1-216ENST00000620465 TPP1O14773 563 aa4.44□□□□□ -1.7
MALAT1-216ENST00000620465 TRIM24O15164 1050 aa4.44□□□□□ -1.7
MALAT1-216ENST00000620465 RECQL4O94761 1208 aa4.44□□□□□ -1.7
MALAT1-216ENST00000620465 ANXA1P04083 346 aa4.44□□□□□ -1.7
MALAT1-216ENST00000620465 KRT18P05783 430 aaKnown RBP4.44□□□□□ -1.7
MALAT1-216ENST00000620465 ZNF20P17024 532 aa4.44□□□□□ -1.7
MALAT1-216ENST00000620465 RHCEP18577 417 aa4.44□□□□□ -1.7
MALAT1-216ENST00000620465 SLC6A2P23975 617 aa4.44□□□□□ -1.7
MALAT1-216ENST00000620465 SLC6A4P31645 630 aa4.44□□□□□ -1.7
MALAT1-216ENST00000620465 APOBEC3AP31941 199 aaPredicted RBP4.44□□□□□ -1.7
MALAT1-216ENST00000620465 CACNB3P54284 484 aa4.44□□□□□ -1.7
MALAT1-216ENST00000620465 USP14P54578 494 aa4.44□□□□□ -1.7
MALAT1-216ENST00000620465 FAM193AP78312 1265 aa4.44□□□□□ -1.7
MALAT1-216ENST00000620465 RHDQ02161 417 aa4.44□□□□□ -1.7
MALAT1-216ENST00000620465 NHLH2Q02577 135 aa4.44□□□□□ -1.7
MALAT1-216ENST00000620465 GALEQ14376 348 aa4.44□□□□□ -1.7
MALAT1-216ENST00000620465 LLGL1Q15334 1064 aa4.44□□□□□ -1.7
MALAT1-216ENST00000620465 SPATS1Q496A3 300 aa4.44□□□□□ -1.7
MALAT1-216ENST00000620465 CCDC149Q6ZUS6 474 aa4.44□□□□□ -1.7
MALAT1-216ENST00000620465 MAEAQ7L5Y9 396 aa4.44□□□□□ -1.7
MALAT1-216ENST00000620465 PPP1R3BQ86XI6 285 aa4.44□□□□□ -1.7
MALAT1-216ENST00000620465 SYT12Q8IV01 421 aa4.44□□□□□ -1.7
MALAT1-216ENST00000620465 FITM2Q8N6M3 262 aa4.44□□□□□ -1.7
MALAT1-216ENST00000620465 TBC1D15Q8TC07 691 aa4.44□□□□□ -1.7
MALAT1-216ENST00000620465 DCLRE1CQ96SD1 692 aaKnown RBP4.44□□□□□ -1.7
MALAT1-216ENST00000620465 C1orf43Q9BWL3 253 aa4.44□□□□□ -1.7
MALAT1-216ENST00000620465 C1QTNF3Q9BXJ4 246 aa4.44□□□□□ -1.7
MALAT1-216ENST00000620465 GSTO2Q9H4Y5 243 aa4.44□□□□□ -1.7
MALAT1-216ENST00000620465 SLAMF7Q9NQ25 335 aa4.44□□□□□ -1.7
MALAT1-216ENST00000620465 CNNM1Q9NRU3 951 aa4.44□□□□□ -1.7
MALAT1-216ENST00000620465 STAP2Q9UGK3 403 aa4.44□□□□□ -1.7
MALAT1-216ENST00000620465 EIF2B4Q9UI10 523 aaKnown RBP4.44□□□□□ -1.7
MALAT1-216ENST00000620465 ZDHHC8Q9ULC8 765 aa4.44□□□□□ -1.7
MALAT1-216ENST00000620465 L1RE1Q9UN81 338 aa4.44□□□□□ -1.7
MALAT1-216ENST00000620465 TESMINQ9Y4I5 508 aa4.44□□□□□ -1.7
MALAT1-216ENST00000620465 PCDHA1Q9Y5I3 950 aa4.44□□□□□ -1.7
MALAT1-216ENST00000620465 ARID1BQ8NFD5 2236 aaPredicted RBP4.44□□□□□ -1.7
MALAT1-216ENST00000620465 A0A1W2PPL8 197 aa4.43□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms