RNA–Protein interactions for RNA: ENST00000617641.4

PCDHGC3-205, Transcript of protocadherin gamma subfamily C, 3, humanhuman

TSL 1 (best) BASIC

Gene PCDHGC3, Length 2,346 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-205ENST00000617641 MARCH8Q5T0T0 291 aa18.59■□□□□ 0.57
PCDHGC3-205ENST00000617641 ACAD10Q6JQN1 1059 aa18.59■□□□□ 0.57
PCDHGC3-205ENST00000617641 CHADLQ6NUI6 762 aa18.59■□□□□ 0.57
PCDHGC3-205ENST00000617641 TMEM270Q6UE05 265 aa18.59■□□□□ 0.57
PCDHGC3-205ENST00000617641 EFCAB13Q8IY85 973 aa18.59■□□□□ 0.57
PCDHGC3-205ENST00000617641 ZNF653Q96CK0 615 aa18.59■□□□□ 0.57
PCDHGC3-205ENST00000617641 SELENOOQ9BVL4 669 aa18.59■□□□□ 0.57
PCDHGC3-205ENST00000617641 PCNTO95613 3336 aa18.59■□□□□ 0.57
PCDHGC3-205ENST00000617641 GPR25O00155 361 aa18.58■□□□□ 0.57
PCDHGC3-205ENST00000617641 DYNC1LI2O43237 492 aaPredicted RBP18.58■□□□□ 0.57
PCDHGC3-205ENST00000617641 MCM3P25205 808 aa18.58■□□□□ 0.57
PCDHGC3-205ENST00000617641 PLA2G4AP47712 749 aa18.58■□□□□ 0.57
PCDHGC3-205ENST00000617641 MYL6P60660 151 aa18.58■□□□□ 0.57
PCDHGC3-205ENST00000617641 DUOXA2Q1HG44 320 aa18.58■□□□□ 0.57
PCDHGC3-205ENST00000617641 C8orf74Q6P047 294 aa18.58■□□□□ 0.57
PCDHGC3-205ENST00000617641 CPB2Q96IY4 423 aa18.58■□□□□ 0.57
PCDHGC3-205ENST00000617641 IMPG2Q9BZV3 1241 aa18.58■□□□□ 0.57
PCDHGC3-205ENST00000617641 L1RE1Q9UN81 338 aa18.58■□□□□ 0.57
PCDHGC3-205ENST00000617641 MANSC4A6NHS7 340 aaPredicted RBP18.58■□□□□ 0.56
PCDHGC3-205ENST00000617641 TMEM110-MUSTN1A8MSY1 372 aa18.58■□□□□ 0.56
PCDHGC3-205ENST00000617641 DDX3YO15523 660 aaKnown RBP18.58■□□□□ 0.56
PCDHGC3-205ENST00000617641 ASS1P00966 412 aaKnown RBP18.58■□□□□ 0.56
PCDHGC3-205ENST00000617641 CYP1A2P05177 515 aa18.58■□□□□ 0.56
PCDHGC3-205ENST00000617641 CXCL8P10145 99 aa18.58■□□□□ 0.56
PCDHGC3-205ENST00000617641 TBXAS1P24557 533 aaPredicted RBP18.58■□□□□ 0.56
PCDHGC3-205ENST00000617641 SURF1Q15526 300 aa18.58■□□□□ 0.56
PCDHGC3-205ENST00000617641 FAM187BQ17R55 369 aa18.58■□□□□ 0.56
PCDHGC3-205ENST00000617641 IFNLR1Q8IU57 520 aaPredicted RBP18.58■□□□□ 0.56
PCDHGC3-205ENST00000617641 GSPT2Q8IYD1 628 aaKnown RBP18.58■□□□□ 0.56
PCDHGC3-205ENST00000617641 ACTRT1Q8TDG2 376 aa18.58■□□□□ 0.56
PCDHGC3-205ENST00000617641 PPP1R13LQ8WUF5 828 aa18.58■□□□□ 0.56
PCDHGC3-205ENST00000617641 LENG1Q96BZ8 264 aaPredicted RBP18.58■□□□□ 0.56
PCDHGC3-205ENST00000617641 MGAMO43451 1857 aa18.58■□□□□ 0.56
PCDHGC3-205ENST00000617641 ANK1P16157 1881 aa18.58■□□□□ 0.56
PCDHGC3-205ENST00000617641 MYBL2P10244 700 aa18.57■□□□□ 0.56
PCDHGC3-205ENST00000617641 BPIFB4P59827 614 aa18.57■□□□□ 0.56
PCDHGC3-205ENST00000617641 MSL3Q8N5Y2 521 aaKnown RBP18.57■□□□□ 0.56
PCDHGC3-205ENST00000617641 RBBP8NLQ8NC74 664 aaPredicted RBP18.57■□□□□ 0.56
PCDHGC3-205ENST00000617641 NLRP7Q8WX94 980 aa18.57■□□□□ 0.56
PCDHGC3-205ENST00000617641 NUP85Q9BW27 656 aa18.57■□□□□ 0.56
PCDHGC3-205ENST00000617641 GTF3C4Q9UKN8 822 aa18.57■□□□□ 0.56
PCDHGC3-205ENST00000617641 NOC2LQ9Y3T9 749 aaKnown RBP18.57■□□□□ 0.56
PCDHGC3-205ENST00000617641 ALG6Q9Y672 507 aa18.57■□□□□ 0.56
PCDHGC3-205ENST00000617641 TMEM191BP0C7N4 346 aa18.57■□□□□ 0.56
PCDHGC3-205ENST00000617641 UNGP13051 313 aaPredicted RBP18.57■□□□□ 0.56
PCDHGC3-205ENST00000617641 CCL14Q16627 93 aa18.57■□□□□ 0.56
PCDHGC3-205ENST00000617641 C11orf63Q6NUN7 778 aa18.57■□□□□ 0.56
PCDHGC3-205ENST00000617641 ZNF677Q86XU0 584 aa18.57■□□□□ 0.56
PCDHGC3-205ENST00000617641 CPA5Q8WXQ8 436 aa18.57■□□□□ 0.56
PCDHGC3-205ENST00000617641 SCLT1Q96NL6 688 aa18.57■□□□□ 0.56
PCDHGC3-205ENST00000617641 KRT12Q99456 494 aa18.57■□□□□ 0.56
PCDHGC3-205ENST00000617641 PDZD7Q9H5P4 517 aa18.57■□□□□ 0.56
PCDHGC3-205ENST00000617641 RPF1Q9H9Y2 349 aaKnown RBP18.57■□□□□ 0.56
PCDHGC3-205ENST00000617641 SETD4Q9NVD3 440 aa18.57■□□□□ 0.56
PCDHGC3-205ENST00000617641 PGRMC1O00264 195 aaKnown RBP18.56■□□□□ 0.56
PCDHGC3-205ENST00000617641 B4GALT4O60513 344 aa18.56■□□□□ 0.56
PCDHGC3-205ENST00000617641 MTA2O94776 668 aa18.56■□□□□ 0.56
PCDHGC3-205ENST00000617641 CFHP08603 1231 aa18.56■□□□□ 0.56
PCDHGC3-205ENST00000617641 SSTR3P32745 418 aaPredicted RBP18.56■□□□□ 0.56
PCDHGC3-205ENST00000617641 CYP2C19P33261 490 aa18.56■□□□□ 0.56
PCDHGC3-205ENST00000617641 IRX5P78411 483 aaPredicted RBP18.56■□□□□ 0.56
PCDHGC3-205ENST00000617641 MESDQ14696 234 aa18.56■□□□□ 0.56
PCDHGC3-205ENST00000617641 DCAF12L1Q5VU92 463 aa18.56■□□□□ 0.56
PCDHGC3-205ENST00000617641 CCNI2Q6ZMN8 369 aaPredicted RBP18.56■□□□□ 0.56
PCDHGC3-205ENST00000617641 KIAA0319LQ8IZA0 1049 aa18.56■□□□□ 0.56
PCDHGC3-205ENST00000617641 ZNF564Q8TBZ8 553 aaPredicted RBP18.56■□□□□ 0.56
PCDHGC3-205ENST00000617641 BTBD6Q96KE9 485 aa18.56■□□□□ 0.56
PCDHGC3-205ENST00000617641 BUD13Q9BRD0 619 aaKnown RBP eCLIP18.56■□□□□ 0.56
PCDHGC3-205ENST00000617641 TMEM59LQ9UK28 342 aa18.56■□□□□ 0.56
PCDHGC3-205ENST00000617641 CNTN6Q9UQ52 1028 aa18.56■□□□□ 0.56
PCDHGC3-205ENST00000617641 MAP2K7O14733 419 aa18.56■□□□□ 0.56
PCDHGC3-205ENST00000617641 ZEB2O60315 1214 aa18.56■□□□□ 0.56
PCDHGC3-205ENST00000617641 ARF4P18085 180 aaPredicted RBP18.56■□□□□ 0.56
PCDHGC3-205ENST00000617641 GNA15P30679 374 aa18.56■□□□□ 0.56
PCDHGC3-205ENST00000617641 TRPC3Q13507 836 aa18.56■□□□□ 0.56
PCDHGC3-205ENST00000617641 NAA35Q5VZE5 725 aa18.56■□□□□ 0.56
PCDHGC3-205ENST00000617641 OLFML2BQ68BL8 750 aa18.56■□□□□ 0.56
PCDHGC3-205ENST00000617641 HDXQ7Z353 690 aa18.56■□□□□ 0.56
PCDHGC3-205ENST00000617641 SAPCD2Q86UD0 394 aa18.56■□□□□ 0.56
PCDHGC3-205ENST00000617641 RASGEF1CQ8N431 466 aa18.56■□□□□ 0.56
PCDHGC3-205ENST00000617641 AP1M1Q9BXS5 423 aa18.56■□□□□ 0.56
PCDHGC3-205ENST00000617641 PLEKHA4Q9H4M7 779 aa18.56■□□□□ 0.56
PCDHGC3-205ENST00000617641 GNEQ9Y223 722 aaKnown RBP18.56■□□□□ 0.56
PCDHGC3-205ENST00000617641 KAT6AQ92794 2004 aa18.56■□□□□ 0.56
PCDHGC3-205ENST00000617641 STAG3L1P0CL83 205 aa18.55■□□□□ 0.56
PCDHGC3-205ENST00000617641 RGMBQ6NW40 437 aa18.55■□□□□ 0.56
PCDHGC3-205ENST00000617641 PASD1Q8IV76 773 aa18.55■□□□□ 0.56
PCDHGC3-205ENST00000617641 KLHL7Q8IXQ5 586 aa18.55■□□□□ 0.56
PCDHGC3-205ENST00000617641 TMEM130Q8N3G9 435 aa18.55■□□□□ 0.56
PCDHGC3-205ENST00000617641 UBR7Q8N806 425 aa18.55■□□□□ 0.56
PCDHGC3-205ENST00000617641 CYFIP2Q96F07 1278 aa18.55■□□□□ 0.56
PCDHGC3-205ENST00000617641 ANKRD36BP1Q96IX9 119 aa18.55■□□□□ 0.56
PCDHGC3-205ENST00000617641 CALR3Q96L12 384 aaKnown RBP18.55■□□□□ 0.56
PCDHGC3-205ENST00000617641 STIM2Q9P246 746 aa18.55■□□□□ 0.56
PCDHGC3-205ENST00000617641 CNOT8Q9UFF9 292 aaKnown RBP18.55■□□□□ 0.56
PCDHGC3-205ENST00000617641 MEFVO15553 781 aaPredicted RBP18.55■□□□□ 0.56
PCDHGC3-205ENST00000617641 TNNC2P02585 160 aa18.55■□□□□ 0.56
PCDHGC3-205ENST00000617641 ZNF865P0CJ78 1059 aaPredicted RBP18.55■□□□□ 0.56
PCDHGC3-205ENST00000617641 MCF2P10911 925 aa18.55■□□□□ 0.56
PCDHGC3-205ENST00000617641 CYP2B6P20813 491 aa18.55■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms