RNA–Protein interactions for RNA: ENST00000617558.2

AL662899.3-202, humanhuman

TSL 1 (best) BASIC

Gene AL662899.3, Length 991 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AL662899.3-202ENST00000617558 DLG4P78352 724 aa12.6□□□□□ -0.39
AL662899.3-202ENST00000617558 PPP3CAQ08209 521 aa12.6□□□□□ -0.39
AL662899.3-202ENST00000617558 BTG3Q14201 252 aaPredicted RBP12.6□□□□□ -0.39
AL662899.3-202ENST00000617558 KCNJ12Q14500 433 aa12.6□□□□□ -0.39
AL662899.3-202ENST00000617558 MAN2A1Q16706 1144 aa12.6□□□□□ -0.39
AL662899.3-202ENST00000617558 UPP1Q16831 310 aa12.6□□□□□ -0.39
AL662899.3-202ENST00000617558 CCDC40Q4G0X9 1142 aa12.6□□□□□ -0.39
AL662899.3-202ENST00000617558 GLRA4Q5JXX5 417 aa12.6□□□□□ -0.39
AL662899.3-202ENST00000617558 TMCO2Q7Z6W1 182 aaPredicted RBP12.6□□□□□ -0.39
AL662899.3-202ENST00000617558 LRRC52Q8N7C0 313 aa12.6□□□□□ -0.39
AL662899.3-202ENST00000617558 RDH13Q8NBN7 331 aa12.6□□□□□ -0.39
AL662899.3-202ENST00000617558 OR5B17Q8NGF7 314 aa12.6□□□□□ -0.39
AL662899.3-202ENST00000617558 ZNF516Q92618 1163 aa12.6□□□□□ -0.39
AL662899.3-202ENST00000617558 FAXDC2Q96IV6 333 aa12.6□□□□□ -0.39
AL662899.3-202ENST00000617558 ANKRD36BP1Q96IX9 119 aa12.6□□□□□ -0.39
AL662899.3-202ENST00000617558 SAMD11Q96NU1 681 aa12.6□□□□□ -0.39
AL662899.3-202ENST00000617558 ZBED2Q9BTP6 218 aa12.6□□□□□ -0.39
AL662899.3-202ENST00000617558 PLVAPQ9BX97 442 aa12.6□□□□□ -0.39
AL662899.3-202ENST00000617558 MTMR12Q9C0I1 747 aa12.6□□□□□ -0.39
AL662899.3-202ENST00000617558 NRDE2Q9H7Z3 1164 aa12.6□□□□□ -0.39
AL662899.3-202ENST00000617558 STK39Q9UEW8 545 aa12.6□□□□□ -0.39
AL662899.3-202ENST00000617558 TUBGCP4Q9UGJ1 667 aa12.6□□□□□ -0.39
AL662899.3-202ENST00000617558 LIMA1Q9UHB6 759 aaKnown RBP12.6□□□□□ -0.39
AL662899.3-202ENST00000617558 SIX4Q9UIU6 781 aa12.6□□□□□ -0.39
AL662899.3-202ENST00000617558 INPP5FQ9Y2H2 1132 aa12.6□□□□□ -0.39
AL662899.3-202ENST00000617558 MRPL42Q9Y6G3 142 aaKnown RBP12.6□□□□□ -0.39
AL662899.3-202ENST00000617558 REV3LO60673 3130 aa12.6□□□□□ -0.39
AL662899.3-202ENST00000617558 VWA8A3KMH1 1905 aa12.59□□□□□ -0.39
AL662899.3-202ENST00000617558 LCHNA4D1U4 455 aa12.59□□□□□ -0.39
AL662899.3-202ENST00000617558 LINC01553A4QN01 128 aa12.59□□□□□ -0.39
AL662899.3-202ENST00000617558 BECN2A8MW95 431 aa12.59□□□□□ -0.39
AL662899.3-202ENST00000617558 PIRO00625 290 aa12.59□□□□□ -0.39
AL662899.3-202ENST00000617558 DDHD2O94830 711 aa12.59□□□□□ -0.39
AL662899.3-202ENST00000617558 POMCP01189 267 aa12.59□□□□□ -0.39
AL662899.3-202ENST00000617558 C4BPAP04003 597 aaKnown RBP12.59□□□□□ -0.39
AL662899.3-202ENST00000617558 TMEM191BP0C7N4 346 aa12.59□□□□□ -0.39
AL662899.3-202ENST00000617558 PNPLA4P41247 253 aa12.59□□□□□ -0.39
AL662899.3-202ENST00000617558 MXI1P50539 228 aa12.59□□□□□ -0.39
AL662899.3-202ENST00000617558 RNASELQ05823 741 aaKnown RBP12.59□□□□□ -0.39
AL662899.3-202ENST00000617558 KRT31Q15323 416 aa12.59□□□□□ -0.39
AL662899.3-202ENST00000617558 MIIPQ5JXC2 388 aa12.59□□□□□ -0.39
AL662899.3-202ENST00000617558 TDRD10Q5VZ19 366 aaKnown RBP12.59□□□□□ -0.39
AL662899.3-202ENST00000617558 KRT39Q6A163 491 aa12.59□□□□□ -0.39
AL662899.3-202ENST00000617558 SV2AQ7L0J3 742 aa12.59□□□□□ -0.39
AL662899.3-202ENST00000617558 TRAPPC11Q7Z392 1133 aa12.59□□□□□ -0.39
AL662899.3-202ENST00000617558 LUZP1Q86V48 1076 aa12.59□□□□□ -0.39
AL662899.3-202ENST00000617558 ZNF280BQ86YH2 543 aa12.59□□□□□ -0.39
AL662899.3-202ENST00000617558 RNF168Q8IYW5 571 aaPredicted RBP12.59□□□□□ -0.39
AL662899.3-202ENST00000617558 FIBCD1Q8N539 461 aa12.59□□□□□ -0.39
AL662899.3-202ENST00000617558 C18orf25Q96B23 403 aaPredicted RBP12.59□□□□□ -0.39
AL662899.3-202ENST00000617558 CCDC127Q96BQ5 260 aa12.59□□□□□ -0.39
AL662899.3-202ENST00000617558 TUBGCP2Q9BSJ2 902 aa12.59□□□□□ -0.39
AL662899.3-202ENST00000617558 PBX4Q9BYU1 374 aa12.59□□□□□ -0.39
AL662899.3-202ENST00000617558 DPP3Q9NY33 737 aa12.59□□□□□ -0.39
AL662899.3-202ENST00000617558 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.59□□□□□ -0.39
AL662899.3-202ENST00000617558 MYO7AQ13402 2215 aa12.58□□□□□ -0.39
AL662899.3-202ENST00000617558 TNNC2P02585 160 aa12.58□□□□□ -0.4
AL662899.3-202ENST00000617558 AFPP02771 609 aaKnown RBP12.58□□□□□ -0.4
AL662899.3-202ENST00000617558 GALTP07902 379 aa12.58□□□□□ -0.4
AL662899.3-202ENST00000617558 TRIM49P0CI25 452 aa12.58□□□□□ -0.4
AL662899.3-202ENST00000617558 TRIM49CP0CI26 452 aa12.58□□□□□ -0.4
AL662899.3-202ENST00000617558 TNNI1P19237 187 aa12.58□□□□□ -0.4
AL662899.3-202ENST00000617558 FMO5P49326 533 aa12.58□□□□□ -0.4
AL662899.3-202ENST00000617558 ERVK-21P61565 698 aa12.58□□□□□ -0.4
AL662899.3-202ENST00000617558 TFAMQ00059 246 aaKnown RBP12.58□□□□□ -0.4
AL662899.3-202ENST00000617558 C9orf57Q5W0N0 161 aa12.58□□□□□ -0.4
AL662899.3-202ENST00000617558 LIMS2Q7Z4I7 341 aa12.58□□□□□ -0.4
AL662899.3-202ENST00000617558 GPR65Q8IYL9 337 aa12.58□□□□□ -0.4
AL662899.3-202ENST00000617558 COLGALT1Q8NBJ5 622 aa12.58□□□□□ -0.4
AL662899.3-202ENST00000617558 TAF4BQ92750 862 aa12.58□□□□□ -0.4
AL662899.3-202ENST00000617558 POP1Q99575 1024 aaKnown RBP12.58□□□□□ -0.4
AL662899.3-202ENST00000617558 XYLT2Q9H1B5 865 aa12.58□□□□□ -0.4
AL662899.3-202ENST00000617558 FAM124BQ9H5Z6 455 aaPredicted RBP12.58□□□□□ -0.4
AL662899.3-202ENST00000617558 AAASQ9NRG9 546 aa12.58□□□□□ -0.4
AL662899.3-202ENST00000617558 MAGEC2Q9UBF1 373 aaPredicted RBP12.58□□□□□ -0.4
AL662899.3-202ENST00000617558 DNAJB4Q9UDY4 337 aa12.58□□□□□ -0.4
AL662899.3-202ENST00000617558 COLQQ9Y215 455 aaPredicted RBP12.58□□□□□ -0.4
AL662899.3-202ENST00000617558 YBX2Q9Y2T7 364 aaKnown RBP12.58□□□□□ -0.4
AL662899.3-202ENST00000617558 PLXNA4Q9HCM2 1894 aa12.57□□□□□ -0.4
AL662899.3-202ENST00000617558 LGALS16A8MUM7 142 aa12.57□□□□□ -0.4
AL662899.3-202ENST00000617558 GRXCR1A8MXD5 290 aa12.57□□□□□ -0.4
AL662899.3-202ENST00000617558 PODXLO00592 558 aa12.57□□□□□ -0.4
AL662899.3-202ENST00000617558 ZC3H11AO75152 810 aaKnown RBP eCLIP12.57□□□□□ -0.44e-7■□□□□ 10.3
AL662899.3-202ENST00000617558 VNN1O95497 513 aa12.57□□□□□ -0.4
AL662899.3-202ENST00000617558 ASS1P00966 412 aaKnown RBP12.57□□□□□ -0.4
AL662899.3-202ENST00000617558 RB1P06400 928 aa12.57□□□□□ -0.4
AL662899.3-202ENST00000617558 CA3P07451 260 aa12.57□□□□□ -0.4
AL662899.3-202ENST00000617558 ATP1A3P13637 1013 aa12.57□□□□□ -0.4
AL662899.3-202ENST00000617558 DNAJB2P25686 324 aa12.57□□□□□ -0.4
AL662899.3-202ENST00000617558 ATICP31939 592 aa12.57□□□□□ -0.4
AL662899.3-202ENST00000617558 SLC11A1P49279 550 aa12.57□□□□□ -0.4
AL662899.3-202ENST00000617558 ALDH7A1P49419 539 aaKnown RBP12.57□□□□□ -0.4
AL662899.3-202ENST00000617558 BCAR1P56945 870 aa12.57□□□□□ -0.4
AL662899.3-202ENST00000617558 TPM4P67936 248 aa12.57□□□□□ -0.4
AL662899.3-202ENST00000617558 TAP1Q03518 808 aa12.57□□□□□ -0.4
AL662899.3-202ENST00000617558 KCNH2Q12809 1159 aa12.57□□□□□ -0.4
AL662899.3-202ENST00000617558 NCOA4Q13772 614 aa12.57□□□□□ -0.4
AL662899.3-202ENST00000617558 CBWD6Q4V339 395 aa12.57□□□□□ -0.4
AL662899.3-202ENST00000617558 PAN2Q504Q3 1202 aaKnown RBP12.57□□□□□ -0.4
AL662899.3-202ENST00000617558 EPC2Q52LR7 807 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms