RNA–Protein interactions for RNA: ENST00000615798.4

COL12A1-211, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 5 BASIC

Gene COL12A1, Length 11,579 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-211ENST00000615798 USPL1Q5W0Q7 1092 aa9.73□□□□□ -0.85
COL12A1-211ENST00000615798 SLFN12LQ6IEE8 588 aa9.73□□□□□ -0.85
COL12A1-211ENST00000615798 AKAP14Q86UN6 197 aa9.73□□□□□ -0.85
COL12A1-211ENST00000615798 CABP7Q86V35 215 aa9.73□□□□□ -0.85
COL12A1-211ENST00000615798 PYROXD1Q8WU10 500 aa9.73□□□□□ -0.85
COL12A1-211ENST00000615798 KCTD4Q8WVF5 259 aa9.73□□□□□ -0.85
COL12A1-211ENST00000615798 HAVCR1Q96D42 359 aa9.73□□□□□ -0.85
COL12A1-211ENST00000615798 RIOK2Q9BVS4 552 aaKnown RBP9.73□□□□□ -0.85
COL12A1-211ENST00000615798 NOD2Q9HC29 1040 aa9.73□□□□□ -0.85
COL12A1-211ENST00000615798 TMEM161AQ9NX61 479 aa9.73□□□□□ -0.85
COL12A1-211ENST00000615798 NIPSNAP3AQ9UFN0 247 aaPredicted RBP9.73□□□□□ -0.85
COL12A1-211ENST00000615798 TCP11X1B4DZS4 312 aa9.73□□□□□ -0.85
COL12A1-211ENST00000615798 AKAP10O43572 662 aa9.73□□□□□ -0.85
COL12A1-211ENST00000615798 MXI1P50539 228 aa9.73□□□□□ -0.85
COL12A1-211ENST00000615798 ZBED6P86452 979 aa9.73□□□□□ -0.85
COL12A1-211ENST00000615798 RESP18Q5W5W9 173 aa9.73□□□□□ -0.85
COL12A1-211ENST00000615798 ZNF574Q6ZN55 896 aaPredicted RBP9.73□□□□□ -0.85
COL12A1-211ENST00000615798 CCDC81Q6ZN84 652 aa9.73□□□□□ -0.85
COL12A1-211ENST00000615798 C4orf50Q6ZRC1 276 aa9.73□□□□□ -0.85
COL12A1-211ENST00000615798 CNBD1Q8NA66 436 aa9.73□□□□□ -0.85
COL12A1-211ENST00000615798 CDC26Q8NHZ8 85 aa9.73□□□□□ -0.85
COL12A1-211ENST00000615798 KLHL32Q96NJ5 620 aa9.73□□□□□ -0.85
COL12A1-211ENST00000615798 EML4Q9HC35 981 aaKnown RBP9.73□□□□□ -0.85
COL12A1-211ENST00000615798 RGS17Q9UGC6 210 aaPredicted RBP9.73□□□□□ -0.85
COL12A1-211ENST00000615798 GPN3Q9UHW5 284 aaPredicted RBP9.73□□□□□ -0.85
COL12A1-211ENST00000615798 SH2B2O14492 632 aaPredicted RBP9.73□□□□□ -0.85
COL12A1-211ENST00000615798 RHAGQ02094 409 aa9.73□□□□□ -0.85
COL12A1-211ENST00000615798 PRKG2Q13237 762 aa9.73□□□□□ -0.85
COL12A1-211ENST00000615798 ASPRV1Q53RT3 343 aa9.73□□□□□ -0.85
COL12A1-211ENST00000615798 PROM2Q8N271 834 aa9.73□□□□□ -0.85
COL12A1-211ENST00000615798 SAMD3Q8N6K7 520 aa9.73□□□□□ -0.85
COL12A1-211ENST00000615798 ZKSCAN7Q9P0L1 754 aaPredicted RBP9.73□□□□□ -0.85
COL12A1-211ENST00000615798 PIK3C2BO00750 1634 aa9.73□□□□□ -0.85
COL12A1-211ENST00000615798 ECDO95905 644 aaPredicted RBP9.73□□□□□ -0.85
COL12A1-211ENST00000615798 CYP2C19P33261 490 aa9.73□□□□□ -0.85
COL12A1-211ENST00000615798 ACLYP53396 1101 aa9.73□□□□□ -0.85
COL12A1-211ENST00000615798 COPS2P61201 443 aa9.73□□□□□ -0.85
COL12A1-211ENST00000615798 VEPH1Q14D04 833 aa9.73□□□□□ -0.85
COL12A1-211ENST00000615798 GTSE1Q9NYZ3 720 aa9.73□□□□□ -0.85
COL12A1-211ENST00000615798 CTNNAL1Q9UBT7 734 aa9.73□□□□□ -0.85
COL12A1-211ENST00000615798 CRB1P82279 1406 aa9.73□□□□□ -0.85
COL12A1-211ENST00000615798 ANKRD65E5RJM6 399 aa9.73□□□□□ -0.85
COL12A1-211ENST00000615798 H2AFZP0C0S5 128 aa9.73□□□□□ -0.85
COL12A1-211ENST00000615798 ANXA13P27216 316 aa9.73□□□□□ -0.85
COL12A1-211ENST00000615798 TRIM28Q13263 835 aaKnown RBP9.73□□□□□ -0.85
COL12A1-211ENST00000615798 MAPK11Q15759 364 aa9.73□□□□□ -0.85
COL12A1-211ENST00000615798 DGUOKQ16854 277 aa9.73□□□□□ -0.85
COL12A1-211ENST00000615798 ARMC6Q6NXE6 501 aa9.73□□□□□ -0.85
COL12A1-211ENST00000615798 H2AFVQ71UI9 128 aa9.73□□□□□ -0.85
COL12A1-211ENST00000615798 PEG10Q86TG7 708 aaKnown RBP9.73□□□□□ -0.85
COL12A1-211ENST00000615798 SLC35F6Q8N357 371 aa9.73□□□□□ -0.85
COL12A1-211ENST00000615798 SHCBP1Q8NEM2 672 aa9.73□□□□□ -0.85
COL12A1-211ENST00000615798 BEST2Q8NFU1 509 aa9.73□□□□□ -0.85
COL12A1-211ENST00000615798 GRPEL2Q8TAA5 225 aa9.73□□□□□ -0.85
COL12A1-211ENST00000615798 TP53INP1Q96A56 240 aa9.73□□□□□ -0.85
COL12A1-211ENST00000615798 FANCLQ9NW38 375 aa9.73□□□□□ -0.85
COL12A1-211ENST00000615798 SHROOM1Q2M3G4 852 aaPredicted RBP9.73□□□□□ -0.85
COL12A1-211ENST00000615798 SPDYE7PQ495Y7 208 aa9.73□□□□□ -0.85
COL12A1-211ENST00000615798 PCNX4Q63HM2 1172 aa9.73□□□□□ -0.85
COL12A1-211ENST00000615798 SZRD1Q7Z422 152 aa9.73□□□□□ -0.85
COL12A1-211ENST00000615798 UXS1Q8NBZ7 420 aa9.73□□□□□ -0.85
COL12A1-211ENST00000615798 VMP1Q96GC9 406 aa9.73□□□□□ -0.85
COL12A1-211ENST00000615798 CCDC17Q96LX7 622 aa9.73□□□□□ -0.85
COL12A1-211ENST00000615798 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.73□□□□□ -0.85
COL12A1-211ENST00000615798 RSL24D1Q9UHA3 163 aaKnown RBP9.73□□□□□ -0.85
COL12A1-211ENST00000615798 SERTAD1Q9UHV2 236 aa9.73□□□□□ -0.85
COL12A1-211ENST00000615798 TUFMP49411 452 aaKnown RBP9.72□□□□□ -0.85
COL12A1-211ENST00000615798 GALNT4Q8N4A0 578 aa9.72□□□□□ -0.85
COL12A1-211ENST00000615798 TEX19Q8NA77 164 aa9.72□□□□□ -0.85
COL12A1-211ENST00000615798 GATAD2BQ8WXI9 593 aa9.72□□□□□ -0.85
COL12A1-211ENST00000615798 PAIP1Q9H074 479 aaKnown RBP9.72□□□□□ -0.85
COL12A1-211ENST00000615798 CYP4F11Q9HBI6 524 aa9.72□□□□□ -0.85
COL12A1-211ENST00000615798 TOM1O60784 492 aa9.72□□□□□ -0.85
COL12A1-211ENST00000615798 HUS1O60921 280 aa9.72□□□□□ -0.85
COL12A1-211ENST00000615798 ACSL3O95573 720 aa9.72□□□□□ -0.85
COL12A1-211ENST00000615798 PTPN12Q05209 780 aaKnown RBP9.72□□□□□ -0.85
COL12A1-211ENST00000615798 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP9.72□□□□□ -0.85
COL12A1-211ENST00000615798 ARHGAP27Q6ZUM4 889 aa9.72□□□□□ -0.85
COL12A1-211ENST00000615798 FAM47EQ6ZV65 393 aa9.72□□□□□ -0.85
COL12A1-211ENST00000615798 KRT27Q7Z3Y8 459 aa9.72□□□□□ -0.85
COL12A1-211ENST00000615798 IFNEQ86WN2 208 aa9.72□□□□□ -0.85
COL12A1-211ENST00000615798 NCKAP5LQ9HCH0 1330 aa9.72□□□□□ -0.85
COL12A1-211ENST00000615798 MYCP01106 439 aaPredicted RBP9.72□□□□□ -0.85
COL12A1-211ENST00000615798 RPS2P15880 293 aaKnown RBP9.72□□□□□ -0.85
COL12A1-211ENST00000615798 PAMP19021 973 aa9.72□□□□□ -0.85
COL12A1-211ENST00000615798 ANKS6Q68DC2 871 aa9.72□□□□□ -0.85
COL12A1-211ENST00000615798 FAM173BQ6P4H8 233 aa9.72□□□□□ -0.85
COL12A1-211ENST00000615798 B3GNT6Q6ZMB0 384 aa9.72□□□□□ -0.85
COL12A1-211ENST00000615798 SUPT20HQ8NEM7 779 aa9.72□□□□□ -0.85
COL12A1-211ENST00000615798 WWP1Q9H0M0 922 aa9.72□□□□□ -0.85
COL12A1-211ENST00000615798 GAS2O43903 313 aaKnown RBP9.72□□□□□ -0.85
COL12A1-211ENST00000615798 SMNDC1O75940 238 aaKnown RBP eCLIP9.72□□□□□ -0.85
COL12A1-211ENST00000615798 PCDHA5Q9Y5H7 936 aa9.72□□□□□ -0.85
COL12A1-211ENST00000615798 C5orf22Q49AR2 442 aa9.72□□□□□ -0.85
COL12A1-211ENST00000615798 KCTD21Q4G0X4 260 aa9.72□□□□□ -0.85
COL12A1-211ENST00000615798 ZRANB3Q5FWF4 1079 aa9.72□□□□□ -0.85
COL12A1-211ENST00000615798 PPP1R18Q6NYC8 613 aa9.72□□□□□ -0.85
COL12A1-211ENST00000615798 PMF1Q6P1K2 205 aa9.72□□□□□ -0.85
COL12A1-211ENST00000615798 SPAG16Q8N0X2 631 aa9.72□□□□□ -0.85
COL12A1-211ENST00000615798 SLC6A15Q9H2J7 730 aa9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms