RNA–Protein interactions for RNA: ENST00000613459.4

HMGXB3-206, Transcript of HMG-box containing 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene HMGXB3, Length 5,567 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-206ENST00000613459 SUPT3HO75486 399 aa18.31■□□□□ 0.52
HMGXB3-206ENST00000613459 IL18RAPO95256 599 aa18.31■□□□□ 0.52
HMGXB3-206ENST00000613459 APOA4P06727 396 aa18.31■□□□□ 0.52
HMGXB3-206ENST00000613459 RFC5P40937 340 aa18.31■□□□□ 0.52
HMGXB3-206ENST00000613459 MRPS15P82914 257 aaKnown RBP18.31■□□□□ 0.52
HMGXB3-206ENST00000613459 SGSM1Q2NKQ1 1148 aa18.31■□□□□ 0.52
HMGXB3-206ENST00000613459 SLC30A9Q6PML9 568 aa18.31■□□□□ 0.52
HMGXB3-206ENST00000613459 NUDT18Q6ZVK8 323 aa18.31■□□□□ 0.52
HMGXB3-206ENST00000613459 ARL8AQ96BM9 186 aa18.31■□□□□ 0.52
HMGXB3-206ENST00000613459 HSPBP1Q9NZL4 362 aa18.31■□□□□ 0.52
HMGXB3-206ENST00000613459 AMACRQ9UHK6 382 aa18.31■□□□□ 0.52
HMGXB3-206ENST00000613459 IQGAP3Q86VI3 1631 aa18.3■□□□□ 0.52
HMGXB3-206ENST00000613459 MFSD14CQ5VZR4 134 aa18.3■□□□□ 0.52
HMGXB3-206ENST00000613459 LRRC1Q9BTT6 524 aa18.3■□□□□ 0.52
HMGXB3-206ENST00000613459 CASS4Q9NQ75 786 aa18.3■□□□□ 0.52
HMGXB3-206ENST00000613459 TRIM49P0CI25 452 aa18.3■□□□□ 0.52
HMGXB3-206ENST00000613459 TRIM49CP0CI26 452 aa18.3■□□□□ 0.52
HMGXB3-206ENST00000613459 MAP4P27816 1152 aaKnown RBP18.3■□□□□ 0.52
HMGXB3-206ENST00000613459 ALDH18A1P54886 795 aaKnown RBP18.3■□□□□ 0.52
HMGXB3-206ENST00000613459 CCT8L2Q96SF2 557 aa18.3■□□□□ 0.52
HMGXB3-206ENST00000613459 NDFIP2Q9NV92 336 aa18.3■□□□□ 0.52
HMGXB3-206ENST00000613459 PAK5Q9P286 719 aa18.3■□□□□ 0.52
HMGXB3-206ENST00000613459 TUBE1Q9UJT0 475 aa18.3■□□□□ 0.52
HMGXB3-206ENST00000613459 CROCC2H7BZ55 1655 aa18.3■□□□□ 0.52
HMGXB3-206ENST00000613459 PSMD14O00487 310 aa18.3■□□□□ 0.52
HMGXB3-206ENST00000613459 ACADSBP45954 432 aa18.3■□□□□ 0.52
HMGXB3-206ENST00000613459 TAS2R42Q7RTR8 314 aa18.3■□□□□ 0.52
HMGXB3-206ENST00000613459 SZRD1Q7Z422 152 aa18.3■□□□□ 0.52
HMGXB3-206ENST00000613459 GTF3C2Q8WUA4 911 aaPredicted RBP18.3■□□□□ 0.52
HMGXB3-206ENST00000613459 MTSS1O43312 755 aa18.3■□□□□ 0.52
HMGXB3-206ENST00000613459 NMT2O60551 498 aa18.3■□□□□ 0.52
HMGXB3-206ENST00000613459 HSPA1AP0DMV8 641 aaKnown RBP18.3■□□□□ 0.52
HMGXB3-206ENST00000613459 HSPA1BP0DMV9 641 aaKnown RBP18.3■□□□□ 0.52
HMGXB3-206ENST00000613459 GRIN1Q05586 938 aa18.3■□□□□ 0.52
HMGXB3-206ENST00000613459 NME3Q13232 169 aa18.3■□□□□ 0.52
HMGXB3-206ENST00000613459 PCYOX1LQ8NBM8 494 aa18.3■□□□□ 0.52
HMGXB3-206ENST00000613459 FRMD8P1Q9BZ68 369 aaPredicted RBP18.3■□□□□ 0.52
HMGXB3-206ENST00000613459 CCDC134Q9H6E4 229 aa18.3■□□□□ 0.52
HMGXB3-206ENST00000613459 RUBCNLQ9H714 662 aa18.3■□□□□ 0.52
HMGXB3-206ENST00000613459 MAD2L2Q9UI95 211 aa18.3■□□□□ 0.52
HMGXB3-206ENST00000613459 TMEM253P0C7T8 217 aa18.29■□□□□ 0.52
HMGXB3-206ENST00000613459 FMO5P49326 533 aa18.29■□□□□ 0.52
HMGXB3-206ENST00000613459 STX3Q13277 289 aa18.29■□□□□ 0.52
HMGXB3-206ENST00000613459 ATP11BQ9Y2G3 1177 aa18.29■□□□□ 0.52
HMGXB3-206ENST00000613459 GTF3C5Q9Y5Q8 519 aaPredicted RBP18.29■□□□□ 0.52
HMGXB3-206ENST00000613459 hCG_2014768A0A024R1R8 64 aa18.29■□□□□ 0.52
HMGXB3-206ENST00000613459 A0A1B0GW55 424 aa18.29■□□□□ 0.52
HMGXB3-206ENST00000613459 ENO1P06733 434 aaKnown RBP18.29■□□□□ 0.52
HMGXB3-206ENST00000613459 DUX4L2P0CJ85 424 aa18.29■□□□□ 0.52
HMGXB3-206ENST00000613459 DUX4L3P0CJ86 424 aa18.29■□□□□ 0.52
HMGXB3-206ENST00000613459 DUX4L4P0CJ87 422 aa18.29■□□□□ 0.52
HMGXB3-206ENST00000613459 DUX4L5P0CJ88 424 aa18.29■□□□□ 0.52
HMGXB3-206ENST00000613459 DUX4L6P0CJ89 424 aa18.29■□□□□ 0.52
HMGXB3-206ENST00000613459 DUX4L7P0CJ90 424 aa18.29■□□□□ 0.52
HMGXB3-206ENST00000613459 FBXW10Q5XX13 1052 aa18.29■□□□□ 0.52
HMGXB3-206ENST00000613459 LDHDQ86WU2 507 aa18.29■□□□□ 0.52
HMGXB3-206ENST00000613459 ZBED2Q9BTP6 218 aa18.29■□□□□ 0.52
HMGXB3-206ENST00000613459 SARS2Q9NP81 518 aaKnown RBP18.29■□□□□ 0.52
HMGXB3-206ENST00000613459 DUX4Q9UBX2 424 aa18.29■□□□□ 0.52
HMGXB3-206ENST00000613459 TJP2Q9UDY2 1190 aa18.29■□□□□ 0.52
HMGXB3-206ENST00000613459 USP31Q70CQ4 1352 aa18.29■□□□□ 0.52
HMGXB3-206ENST00000613459 UBA6A0AVT1 1052 aaPredicted RBP18.29■□□□□ 0.52
HMGXB3-206ENST00000613459 FAM47DPA6NHR8 397 aa18.29■□□□□ 0.52
HMGXB3-206ENST00000613459 CYP26A1O43174 497 aa18.29■□□□□ 0.52
HMGXB3-206ENST00000613459 KCNA3P22001 575 aa18.29■□□□□ 0.52
HMGXB3-206ENST00000613459 FOXO4P98177 505 aa18.29■□□□□ 0.52
HMGXB3-206ENST00000613459 XRRA1Q6P2D8 792 aa18.29■□□□□ 0.52
HMGXB3-206ENST00000613459 C3orf20Q8ND61 904 aa18.29■□□□□ 0.52
HMGXB3-206ENST00000613459 WDR24Q96S15 920 aa18.29■□□□□ 0.52
HMGXB3-206ENST00000613459 MRPL1Q9BYD6 325 aaKnown RBP18.29■□□□□ 0.52
HMGXB3-206ENST00000613459 AIPL1Q9NZN9 384 aa18.29■□□□□ 0.52
HMGXB3-206ENST00000613459 CCNI2Q6ZMN8 369 aaPredicted RBP18.29■□□□□ 0.52
HMGXB3-206ENST00000613459 SEPT12Q8IYM1 358 aa18.29■□□□□ 0.52
HMGXB3-206ENST00000613459 FOPNLQ96NB1 174 aa18.29■□□□□ 0.52
HMGXB3-206ENST00000613459 NYAP2Q9P242 653 aa18.29■□□□□ 0.52
HMGXB3-206ENST00000613459 PAIP2BQ9ULR5 123 aaKnown RBP18.29■□□□□ 0.52
HMGXB3-206ENST00000613459 RABGAP1LQ5R372 815 aa18.28■□□□□ 0.52
HMGXB3-206ENST00000613459 SLC35G2Q8TBE7 412 aa18.28■□□□□ 0.52
HMGXB3-206ENST00000613459 DCUN1D1Q96GG9 259 aa18.28■□□□□ 0.52
HMGXB3-206ENST00000613459 HMOX2P30519 316 aa18.28■□□□□ 0.52
HMGXB3-206ENST00000613459 NR1I3Q14994 352 aa18.28■□□□□ 0.52
HMGXB3-206ENST00000613459 SNX17Q15036 470 aa18.28■□□□□ 0.52
HMGXB3-206ENST00000613459 CYTH1Q15438 398 aa18.28■□□□□ 0.52
HMGXB3-206ENST00000613459 TNIP2Q8NFZ5 429 aa18.28■□□□□ 0.52
HMGXB3-206ENST00000613459 PGBD4Q96DM1 585 aa18.28■□□□□ 0.52
HMGXB3-206ENST00000613459 IL17RAQ96F46 866 aa18.28■□□□□ 0.52
HMGXB3-206ENST00000613459 SULT1E1P49888 294 aa18.28■□□□□ 0.52
HMGXB3-206ENST00000613459 PSMD7P51665 324 aa18.28■□□□□ 0.52
HMGXB3-206ENST00000613459 CYFIP1Q7L576 1253 aa18.28■□□□□ 0.52
HMGXB3-206ENST00000613459 RBM15Q96T37 977 aaKnown RBP eCLIP18.28■□□□□ 0.521e-6■■■□□ 15.9
HMGXB3-206ENST00000613459 TRPM1Q7Z4N2 1603 aa18.28■□□□□ 0.52
HMGXB3-206ENST00000613459 MAGEB2O15479 319 aa18.28■□□□□ 0.52
HMGXB3-206ENST00000613459 KCNN4O15554 427 aa18.28■□□□□ 0.52
HMGXB3-206ENST00000613459 C21orf2O43822 256 aa18.28■□□□□ 0.52
HMGXB3-206ENST00000613459 FOXD4Q12950 439 aaPredicted RBP18.28■□□□□ 0.52
HMGXB3-206ENST00000613459 SH3KBP1Q96B97 665 aa18.28■□□□□ 0.52
HMGXB3-206ENST00000613459 SEC16BQ96JE7 1060 aa18.28■□□□□ 0.52
HMGXB3-206ENST00000613459 XPO6Q96QU8 1125 aaKnown RBP18.28■□□□□ 0.52
HMGXB3-206ENST00000613459 ZCCHC11Q5TAX3 1644 aaKnown RBP18.28■□□□□ 0.52
HMGXB3-206ENST00000613459 TNPO2O14787 897 aaKnown RBP18.28■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms