RNA–Protein interactions for RNA: ENST00000609587.1

SMCHD1-213, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

Gene SMCHD1, Length 460 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-213ENST00000609587 CCAR1Q8IX12 1150 aaKnown RBP5.46□□□□□ -1.54
SMCHD1-213ENST00000609587 CCDC146Q8IYE0 955 aa5.46□□□□□ -1.54
SMCHD1-213ENST00000609587 IFI44Q8TCB0 444 aa5.46□□□□□ -1.54
SMCHD1-213ENST00000609587 CASKIN2Q8WXE0 1202 aa5.46□□□□□ -1.54
SMCHD1-213ENST00000609587 MIEF2Q96C03 454 aa5.46□□□□□ -1.54
SMCHD1-213ENST00000609587 MRGPRX4Q96LA9 322 aa5.46□□□□□ -1.54
SMCHD1-213ENST00000609587 DMRTA2Q96SC8 542 aa5.46□□□□□ -1.54
SMCHD1-213ENST00000609587 FAM204AQ9H8W3 233 aa5.46□□□□□ -1.54
SMCHD1-213ENST00000609587 MAN1C1Q9NR34 630 aa5.46□□□□□ -1.54
SMCHD1-213ENST00000609587 AURKAIP1Q9NWT8 199 aaPredicted RBP5.46□□□□□ -1.54
SMCHD1-213ENST00000609587 CALCOCO1Q9P1Z2 691 aa5.46□□□□□ -1.54
SMCHD1-213ENST00000609587 STXBP5LQ9Y2K9 1186 aa5.46□□□□□ -1.54
SMCHD1-213ENST00000609587 NR2E3Q9Y5X4 410 aa5.46□□□□□ -1.54
SMCHD1-213ENST00000609587 ACTL7AQ9Y615 435 aa5.46□□□□□ -1.54
SMCHD1-213ENST00000609587 KRTAP23-1A1A580 65 aa5.45□□□□□ -1.54
SMCHD1-213ENST00000609587 CAPN14A8MX76 684 aa5.45□□□□□ -1.54
SMCHD1-213ENST00000609587 TEX33O43247 280 aa5.45□□□□□ -1.54
SMCHD1-213ENST00000609587 B3GALT2O43825 422 aa5.45□□□□□ -1.54
SMCHD1-213ENST00000609587 STC2O76061 302 aa5.45□□□□□ -1.54
SMCHD1-213ENST00000609587 ARIH2O95376 493 aa5.45□□□□□ -1.54
SMCHD1-213ENST00000609587 RAP2AP10114 183 aa5.45□□□□□ -1.54
SMCHD1-213ENST00000609587 ALOX15P16050 662 aaPredicted RBP5.45□□□□□ -1.54
SMCHD1-213ENST00000609587 FPR1P21462 350 aa5.45□□□□□ -1.54
SMCHD1-213ENST00000609587 FBLP22087 321 aaKnown RBP5.45□□□□□ -1.54
SMCHD1-213ENST00000609587 HTR1BP28222 390 aa5.45□□□□□ -1.54
SMCHD1-213ENST00000609587 PCSK1P29120 753 aa5.45□□□□□ -1.54
SMCHD1-213ENST00000609587 HK3P52790 923 aa5.45□□□□□ -1.54
SMCHD1-213ENST00000609587 ATP8B2P98198 1209 aa5.45□□□□□ -1.54
SMCHD1-213ENST00000609587 NOGQ13253 232 aa5.45□□□□□ -1.54
SMCHD1-213ENST00000609587 MTM1Q13496 603 aa5.45□□□□□ -1.54
SMCHD1-213ENST00000609587 FAM214AQ32MH5 1076 aa5.45□□□□□ -1.54
SMCHD1-213ENST00000609587 KHDC1Q4VXA5 237 aaKnown RBP5.45□□□□□ -1.54
SMCHD1-213ENST00000609587 FKBP15Q5T1M5 1219 aa5.45□□□□□ -1.54
SMCHD1-213ENST00000609587 KSR2Q6VAB6 950 aa5.45□□□□□ -1.54
SMCHD1-213ENST00000609587 CEP95Q96GE4 821 aa5.45□□□□□ -1.54
SMCHD1-213ENST00000609587 CDK5RAP3Q96JB5 506 aa5.45□□□□□ -1.54
SMCHD1-213ENST00000609587 ZNF512Q96ME7 567 aaPredicted RBP5.45□□□□□ -1.54
SMCHD1-213ENST00000609587 VRK1Q99986 396 aaPredicted RBP5.45□□□□□ -1.54
SMCHD1-213ENST00000609587 CEP72Q9P209 647 aa5.45□□□□□ -1.54
SMCHD1-213ENST00000609587 HECAQ9UBI9 543 aaPredicted RBP5.45□□□□□ -1.54
SMCHD1-213ENST00000609587 RUVBL1Q9Y265 456 aaKnown RBP5.45□□□□□ -1.54
SMCHD1-213ENST00000609587 PCDHA3Q9Y5H8 950 aa5.45□□□□□ -1.54
SMCHD1-213ENST00000609587 ATRNL1Q5VV63 1379 aa5.44□□□□□ -1.54
SMCHD1-213ENST00000609587 A6NNZ2 444 aa5.44□□□□□ -1.54
SMCHD1-213ENST00000609587 WNT10BO00744 389 aa5.44□□□□□ -1.54
SMCHD1-213ENST00000609587 HOXA3O43365 443 aaPredicted RBP5.44□□□□□ -1.54
SMCHD1-213ENST00000609587 RAMP2O60895 175 aa5.44□□□□□ -1.54
SMCHD1-213ENST00000609587 MYL1P05976 194 aa5.44□□□□□ -1.54
SMCHD1-213ENST00000609587 SMARCA1P28370 1054 aa5.44□□□□□ -1.54
SMCHD1-213ENST00000609587 ALDH1A3P47895 512 aa5.44□□□□□ -1.54
SMCHD1-213ENST00000609587 CTXN1P60606 82 aa5.44□□□□□ -1.54
SMCHD1-213ENST00000609587 TLE1Q04724 770 aa5.44□□□□□ -1.54
SMCHD1-213ENST00000609587 LLGL1Q15334 1064 aa5.44□□□□□ -1.54
SMCHD1-213ENST00000609587 ELAVL1Q15717 326 aaKnown RBP5.44□□□□□ -1.54
SMCHD1-213ENST00000609587 CSRP2Q16527 193 aa5.44□□□□□ -1.54
SMCHD1-213ENST00000609587 ATP2B3Q16720 1220 aa5.44□□□□□ -1.54
SMCHD1-213ENST00000609587 AFMIDQ63HM1 303 aa5.44□□□□□ -1.54
SMCHD1-213ENST00000609587 PPP4R4Q6NUP7 873 aa5.44□□□□□ -1.54
SMCHD1-213ENST00000609587 CHST15Q7LFX5 561 aaPredicted RBP5.44□□□□□ -1.54
SMCHD1-213ENST00000609587 HEATR3Q7Z4Q2 680 aa5.44□□□□□ -1.54
SMCHD1-213ENST00000609587 SRGAP1Q7Z6B7 1085 aa5.44□□□□□ -1.54
SMCHD1-213ENST00000609587 DAAM2Q86T65 1068 aa5.44□□□□□ -1.54
SMCHD1-213ENST00000609587 KLHDC4Q8TBB5 520 aa5.44□□□□□ -1.54
SMCHD1-213ENST00000609587 TTC17Q96AE7 1141 aa5.44□□□□□ -1.54
SMCHD1-213ENST00000609587 LRFN3Q9BTN0 628 aa5.44□□□□□ -1.54
SMCHD1-213ENST00000609587 B3GNT5Q9BYG0 378 aa5.44□□□□□ -1.54
SMCHD1-213ENST00000609587 KCNH6Q9H252 994 aa5.44□□□□□ -1.54
SMCHD1-213ENST00000609587 TMEM60Q9H2L4 133 aa5.44□□□□□ -1.54
SMCHD1-213ENST00000609587 ZNF703Q9H7S9 590 aaPredicted RBP5.44□□□□□ -1.54
SMCHD1-213ENST00000609587 LMBRD1Q9NUN5 540 aa5.44□□□□□ -1.54
SMCHD1-213ENST00000609587 CCDC194A0A1B0GVG4 234 aa5.43□□□□□ -1.54
SMCHD1-213ENST00000609587 CXorf49A8MYA2 514 aaPredicted RBP5.43□□□□□ -1.54
SMCHD1-213ENST00000609587 FAM227AF5H4B4 570 aa5.43□□□□□ -1.54
SMCHD1-213ENST00000609587 H3BUI4 141 aa5.43□□□□□ -1.54
SMCHD1-213ENST00000609587 MALP21145 153 aa5.43□□□□□ -1.54
SMCHD1-213ENST00000609587 USP14P54578 494 aa5.43□□□□□ -1.54
SMCHD1-213ENST00000609587 ZNF280AP59817 542 aaPredicted RBP5.43□□□□□ -1.54
SMCHD1-213ENST00000609587 CREMQ03060 361 aa5.43□□□□□ -1.54
SMCHD1-213ENST00000609587 SNAPC2Q13487 334 aa5.43□□□□□ -1.54
SMCHD1-213ENST00000609587 NPNTQ6UXI9 565 aa5.43□□□□□ -1.54
SMCHD1-213ENST00000609587 CCDC149Q6ZUS6 474 aa5.43□□□□□ -1.54
SMCHD1-213ENST00000609587 APBB1IPQ7Z5R6 666 aaPredicted RBP5.43□□□□□ -1.54
SMCHD1-213ENST00000609587 FAM167AQ96KS9 214 aa5.43□□□□□ -1.54
SMCHD1-213ENST00000609587 ARNT2Q9HBZ2 717 aa5.43□□□□□ -1.54
SMCHD1-213ENST00000609587 ABCF2Q9UG63 623 aa5.43□□□□□ -1.54
SMCHD1-213ENST00000609587 B5MCH6 92 aa5.42□□□□□ -1.54
SMCHD1-213ENST00000609587 TPP1O14773 563 aa5.42□□□□□ -1.54
SMCHD1-213ENST00000609587 PLIN1O60240 522 aa5.42□□□□□ -1.54
SMCHD1-213ENST00000609587 MFAP3LO75121 409 aa5.42□□□□□ -1.54
SMCHD1-213ENST00000609587 ZBED1O96006 694 aa5.42□□□□□ -1.54
SMCHD1-213ENST00000609587 SNRPA1P09661 255 aaKnown RBP5.42□□□□□ -1.54
SMCHD1-213ENST00000609587 ATP5JP18859 108 aa5.42□□□□□ -1.54
SMCHD1-213ENST00000609587 GNAT2P19087 354 aa5.42□□□□□ -1.54
SMCHD1-213ENST00000609587 GALEQ14376 348 aa5.42□□□□□ -1.54
SMCHD1-213ENST00000609587 MAP9Q49MG5 647 aa5.42□□□□□ -1.54
SMCHD1-213ENST00000609587 ANO6Q4KMQ2 910 aa5.42□□□□□ -1.54
SMCHD1-213ENST00000609587 OTUD7BQ6GQQ9 843 aa5.42□□□□□ -1.54
SMCHD1-213ENST00000609587 HTR3DQ70Z44 454 aa5.42□□□□□ -1.54
SMCHD1-213ENST00000609587 TMPRSS6Q8IU80 811 aa5.42□□□□□ -1.54
SMCHD1-213ENST00000609587 PLXDC1Q8IUK5 500 aa5.42□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms