RNA–Protein interactions for RNA: ENST00000604187.1

PDLIM1P1-201, Transcript of PDZ and LIM domain 1 pseudogene 1, humanhuman

BASIC

Gene PDLIM1P1, Length 969 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1P1-201ENST00000604187 PRMT7Q9NVM4 692 aaPredicted RBP13□□□□□ -0.33
PDLIM1P1-201ENST00000604187 C2orf42Q9NWW7 574 aa13□□□□□ -0.33
PDLIM1P1-201ENST00000604187 NCANO14594 1321 aa12.99□□□□□ -0.33
PDLIM1P1-201ENST00000604187 CCDC194A0A1B0GVG4 234 aa12.99□□□□□ -0.33
PDLIM1P1-201ENST00000604187 SLC38A8A6NNN8 435 aa12.99□□□□□ -0.33
PDLIM1P1-201ENST00000604187 C1QTNF9BB2RNN3 333 aa12.99□□□□□ -0.33
PDLIM1P1-201ENST00000604187 TMEM189-UBE2V1I3L0A0 370 aa12.99□□□□□ -0.33
PDLIM1P1-201ENST00000604187 ARNTLO00327 626 aa12.99□□□□□ -0.33
PDLIM1P1-201ENST00000604187 TM4SF5O14894 197 aa12.99□□□□□ -0.33
PDLIM1P1-201ENST00000604187 AXIN1O15169 862 aa12.99□□□□□ -0.33
PDLIM1P1-201ENST00000604187 CCNT1O60563 726 aaKnown RBP12.99□□□□□ -0.33
PDLIM1P1-201ENST00000604187 MICAL2O94851 1124 aa12.99□□□□□ -0.33
PDLIM1P1-201ENST00000604187 SLITRK3O94933 977 aa12.99□□□□□ -0.33
PDLIM1P1-201ENST00000604187 DEXIO95424 95 aa12.99□□□□□ -0.33
PDLIM1P1-201ENST00000604187 PRKCBP05771 671 aa12.99□□□□□ -0.33
PDLIM1P1-201ENST00000604187 C1QTNF9P0C862 333 aa12.99□□□□□ -0.33
PDLIM1P1-201ENST00000604187 RPS6KB1P23443 525 aa12.99□□□□□ -0.33
PDLIM1P1-201ENST00000604187 HOXC13P31276 330 aa12.99□□□□□ -0.33
PDLIM1P1-201ENST00000604187 SOX9P48436 509 aa12.99□□□□□ -0.33
PDLIM1P1-201ENST00000604187 CLCNKBP51801 687 aa12.99□□□□□ -0.33
PDLIM1P1-201ENST00000604187 SSRP1Q08945 709 aaKnown RBP12.99□□□□□ -0.33
PDLIM1P1-201ENST00000604187 ACAP1Q15027 740 aa12.99□□□□□ -0.33
PDLIM1P1-201ENST00000604187 CYP4A22Q5TCH4 519 aa12.99□□□□□ -0.33
PDLIM1P1-201ENST00000604187 STPG1Q5TH74 334 aa12.99□□□□□ -0.33
PDLIM1P1-201ENST00000604187 GALNT17Q6IS24 598 aa12.99□□□□□ -0.33
PDLIM1P1-201ENST00000604187 SLC8B1Q6J4K2 584 aa12.99□□□□□ -0.33
PDLIM1P1-201ENST00000604187 NOSTRINQ8IVI9 506 aa12.99□□□□□ -0.33
PDLIM1P1-201ENST00000604187 ZNF461Q8TAF7 563 aa12.99□□□□□ -0.33
PDLIM1P1-201ENST00000604187 ZSCAN18Q8TBC5 510 aaPredicted RBP12.99□□□□□ -0.33
PDLIM1P1-201ENST00000604187 PRIMPOLQ96LW4 560 aa12.99□□□□□ -0.33
PDLIM1P1-201ENST00000604187 ARRDC1-AS1Q9H2J1 176 aa12.99□□□□□ -0.33
PDLIM1P1-201ENST00000604187 GPRC5CQ9NQ84 441 aa12.99□□□□□ -0.33
PDLIM1P1-201ENST00000604187 KCNJ14Q9UNX9 436 aa12.99□□□□□ -0.33
PDLIM1P1-201ENST00000604187 GDAQ9Y2T3 454 aa12.99□□□□□ -0.33
PDLIM1P1-201ENST00000604187 INSL5Q9Y5Q6 135 aa12.99□□□□□ -0.33
PDLIM1P1-201ENST00000604187 N4BP3O15049 544 aa12.98□□□□□ -0.33
PDLIM1P1-201ENST00000604187 TRAPPC3O43617 180 aa12.98□□□□□ -0.33
PDLIM1P1-201ENST00000604187 USO1O60763 962 aaKnown RBP12.98□□□□□ -0.33
PDLIM1P1-201ENST00000604187 ABLIM3O94929 683 aa12.98□□□□□ -0.33
PDLIM1P1-201ENST00000604187 LYPLA2O95372 231 aa12.98□□□□□ -0.33
PDLIM1P1-201ENST00000604187 SEC24AO95486 1093 aa12.98□□□□□ -0.33
PDLIM1P1-201ENST00000604187 GJA1P17302 382 aa12.98□□□□□ -0.33
PDLIM1P1-201ENST00000604187 LIG1P18858 919 aa12.98□□□□□ -0.33
PDLIM1P1-201ENST00000604187 BRCC3P46736 316 aa12.98□□□□□ -0.33
PDLIM1P1-201ENST00000604187 RARRES1P49788 294 aa12.98□□□□□ -0.33
PDLIM1P1-201ENST00000604187 KPNA1P52294 538 aaPredicted RBP12.98□□□□□ -0.33
PDLIM1P1-201ENST00000604187 PRPF4BQ13523 1007 aaKnown RBP12.98□□□□□ -0.33
PDLIM1P1-201ENST00000604187 WDR44Q5JSH3 913 aa12.98□□□□□ -0.33
PDLIM1P1-201ENST00000604187 CDCA2Q69YH5 1023 aaPredicted RBP12.98□□□□□ -0.33
PDLIM1P1-201ENST00000604187 CD300LGQ6UXG3 332 aa12.98□□□□□ -0.33
PDLIM1P1-201ENST00000604187 UNQ6494/PRO21346Q6UXR6 183 aa12.98□□□□□ -0.33
PDLIM1P1-201ENST00000604187 MAEAQ7L5Y9 396 aa12.98□□□□□ -0.33
PDLIM1P1-201ENST00000604187 ZBTB8OSQ8IWT0 167 aa12.98□□□□□ -0.33
PDLIM1P1-201ENST00000604187 TCEAL8Q8IYN2 117 aa12.98□□□□□ -0.33
PDLIM1P1-201ENST00000604187 HS6ST3Q8IZP7 471 aa12.98□□□□□ -0.33
PDLIM1P1-201ENST00000604187 FBXL16Q8N461 479 aa12.98□□□□□ -0.33
PDLIM1P1-201ENST00000604187 C3orf58Q8NDZ4 430 aa12.98□□□□□ -0.33
PDLIM1P1-201ENST00000604187 CSGALNACT1Q8TDX6 532 aa12.98□□□□□ -0.33
PDLIM1P1-201ENST00000604187 EIF2AK1Q9BQI3 630 aaKnown RBP12.98□□□□□ -0.33
PDLIM1P1-201ENST00000604187 AGXT2Q9BYV1 514 aa12.98□□□□□ -0.33
PDLIM1P1-201ENST00000604187 FZD8Q9H461 694 aa12.98□□□□□ -0.33
PDLIM1P1-201ENST00000604187 SLITRK6Q9H5Y7 841 aa12.98□□□□□ -0.33
PDLIM1P1-201ENST00000604187 GOLGA2P5Q9HBQ8 144 aa12.98□□□□□ -0.33
PDLIM1P1-201ENST00000604187 ANKEF1Q9NU02 776 aa12.98□□□□□ -0.33
PDLIM1P1-201ENST00000604187 ZMIZ1Q9ULJ6 1067 aa12.98□□□□□ -0.33
PDLIM1P1-201ENST00000604187 USP20Q9Y2K6 914 aa12.98□□□□□ -0.33
PDLIM1P1-201ENST00000604187 DSPP15924 2871 aaKnown RBP12.98□□□□□ -0.33
PDLIM1P1-201ENST00000604187 ITPR1Q14643 2758 aa12.98□□□□□ -0.33
PDLIM1P1-201ENST00000604187 HEPACAM2A8MVW5 462 aa12.97□□□□□ -0.33
PDLIM1P1-201ENST00000604187 CPLX1O14810 134 aa12.97□□□□□ -0.33
PDLIM1P1-201ENST00000604187 MOSPD3O75425 235 aa12.97□□□□□ -0.33
PDLIM1P1-201ENST00000604187 KCNK5O95279 499 aa12.97□□□□□ -0.33
PDLIM1P1-201ENST00000604187 ZNF806P0C7X5 589 aa12.97□□□□□ -0.33
PDLIM1P1-201ENST00000604187 MYL4P12829 197 aa12.97□□□□□ -0.33
PDLIM1P1-201ENST00000604187 ATF2P15336 505 aa12.97□□□□□ -0.33
PDLIM1P1-201ENST00000604187 RBM25P49756 843 aaKnown RBP12.97□□□□□ -0.33
PDLIM1P1-201ENST00000604187 UPP1Q16831 310 aa12.97□□□□□ -0.33
PDLIM1P1-201ENST00000604187 IQCEQ6IPM2 695 aa12.97□□□□□ -0.33
PDLIM1P1-201ENST00000604187 PSAPL1Q6NUJ1 521 aa12.97□□□□□ -0.33
PDLIM1P1-201ENST00000604187 C1orf228Q6PIY5 440 aa12.97□□□□□ -0.33
PDLIM1P1-201ENST00000604187 TXNDC11Q6PKC3 985 aa12.97□□□□□ -0.33
PDLIM1P1-201ENST00000604187 PIK3AP1Q6ZUJ8 805 aa12.97□□□□□ -0.33
PDLIM1P1-201ENST00000604187 WDR5BQ86VZ2 330 aa12.97□□□□□ -0.33
PDLIM1P1-201ENST00000604187 YAF2Q8IY57 180 aa12.97□□□□□ -0.33
PDLIM1P1-201ENST00000604187 SLFN12Q8IYM2 578 aa12.97□□□□□ -0.33
PDLIM1P1-201ENST00000604187 ELMOD1Q8N336 334 aa12.97□□□□□ -0.33
PDLIM1P1-201ENST00000604187 PIGOQ8TEQ8 1089 aa12.97□□□□□ -0.33
PDLIM1P1-201ENST00000604187 RSPRY1Q96DX4 576 aa12.97□□□□□ -0.33
PDLIM1P1-201ENST00000604187 MSANTD3Q96H12 275 aa12.97□□□□□ -0.33
PDLIM1P1-201ENST00000604187 UROC1Q96N76 676 aa12.97□□□□□ -0.33
PDLIM1P1-201ENST00000604187 PPP1R10Q96QC0 940 aaKnown RBP12.97□□□□□ -0.33
PDLIM1P1-201ENST00000604187 HSD17B14Q9BPX1 270 aa12.97□□□□□ -0.33
PDLIM1P1-201ENST00000604187 ADPGKQ9BRR6 497 aa12.97□□□□□ -0.33
PDLIM1P1-201ENST00000604187 SMOC1Q9H4F8 434 aa12.97□□□□□ -0.33
PDLIM1P1-201ENST00000604187 TRPV4Q9HBA0 871 aa12.97□□□□□ -0.33
PDLIM1P1-201ENST00000604187 SNX14Q9Y5W7 946 aa12.97□□□□□ -0.33
PDLIM1P1-201ENST00000604187 SETXQ7Z333 2677 aaKnown RBP12.97□□□□□ -0.33
PDLIM1P1-201ENST00000604187 A0A087WWV3 80 aa12.96□□□□□ -0.33
PDLIM1P1-201ENST00000604187 EPN2O95208 641 aa12.96□□□□□ -0.33
PDLIM1P1-201ENST00000604187 HOXA6P31267 233 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms