RNA–Protein interactions for RNA: ENST00000593829.5

LSM4-203, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM4, Length 1,908 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-203ENST00000593829 MARCH5Q9NX47 278 aa21.27■■□□□ 1
LSM4-203ENST00000593829 CACNG4Q9UBN1 327 aa21.27■■□□□ 1
LSM4-203ENST00000593829 CITO14578 2027 aa21.27■■□□□ 1
LSM4-203ENST00000593829 CCDC85BQ15834 202 aaPredicted RBP21.27■■□□□ 1
LSM4-203ENST00000593829 PDE12Q6L8Q7 609 aaKnown RBP21.27■■□□□ 1
LSM4-203ENST00000593829 GPD1LQ8N335 351 aa21.27■■□□□ 1
LSM4-203ENST00000593829 ZSWIM2Q8NEG5 633 aa21.27■■□□□ 1
LSM4-203ENST00000593829 MICAL1Q8TDZ2 1067 aa21.27■■□□□ 1
LSM4-203ENST00000593829 RABGGTAQ92696 567 aa21.27■■□□□ 1
LSM4-203ENST00000593829 KIF12Q96FN5 646 aa21.27■■□□□ 1
LSM4-203ENST00000593829 MRFAP1L1Q96HT8 127 aa21.27■■□□□ 1
LSM4-203ENST00000593829 PAAF1Q9BRP4 392 aa21.27■■□□□ 1
LSM4-203ENST00000593829 ASB7Q9H672 318 aa21.27■■□□□ 1
LSM4-203ENST00000593829 HSPBP1Q9NZL4 362 aa21.27■■□□□ 1
LSM4-203ENST00000593829 GOLGA8IPA6NC78 632 aa21.26■□□□□ 0.99
LSM4-203ENST00000593829 GOLGA8JA6NMD2 632 aa21.26■□□□□ 0.99
LSM4-203ENST00000593829 ERVFC1P60507 584 aa21.26■□□□□ 0.99
LSM4-203ENST00000593829 CBX1P83916 185 aa21.26■□□□□ 0.99
LSM4-203ENST00000593829 SOX4Q06945 474 aaPredicted RBP21.26■□□□□ 0.99
LSM4-203ENST00000593829 SPAG1Q07617 926 aa21.26■□□□□ 0.99
LSM4-203ENST00000593829 VPS52Q8N1B4 723 aa21.26■□□□□ 0.99
LSM4-203ENST00000593829 NOC3LQ8WTT2 800 aaKnown RBP21.26■□□□□ 0.99
LSM4-203ENST00000593829 C18orf25Q96B23 403 aaPredicted RBP21.26■□□□□ 0.99
LSM4-203ENST00000593829 DDX27Q96GQ7 796 aaKnown RBP21.26■□□□□ 0.99
LSM4-203ENST00000593829 NSUN3Q9H649 340 aaKnown RBP21.26■□□□□ 0.99
LSM4-203ENST00000593829 GTF3C5Q9Y5Q8 519 aaPredicted RBP21.26■□□□□ 0.99
LSM4-203ENST00000593829 TRIP11Q15643 1979 aa21.26■□□□□ 0.99
LSM4-203ENST00000593829 F8W810 466 aa21.25■□□□□ 0.99
LSM4-203ENST00000593829 CLIC2O15247 247 aa21.25■□□□□ 0.99
LSM4-203ENST00000593829 TADA2AO75478 443 aa21.25■□□□□ 0.99
LSM4-203ENST00000593829 IL18RAPO95256 599 aa21.25■□□□□ 0.99
LSM4-203ENST00000593829 IRS1P35568 1242 aa21.25■□□□□ 0.99
LSM4-203ENST00000593829 ZNF658Q5TYW1 1059 aaPredicted RBP21.25■□□□□ 0.99
LSM4-203ENST00000593829 TMC7Q7Z402 723 aa21.25■□□□□ 0.99
LSM4-203ENST00000593829 GUF1Q8N442 669 aaKnown RBP21.25■□□□□ 0.99
LSM4-203ENST00000593829 PPM1EQ8WY54 764 aa21.25■□□□□ 0.99
LSM4-203ENST00000593829 TCF25Q9BQ70 676 aa21.25■□□□□ 0.99
LSM4-203ENST00000593829 KCTD10Q9H3F6 313 aa21.25■□□□□ 0.99
LSM4-203ENST00000593829 GOLGA2P5Q9HBQ8 144 aa21.25■□□□□ 0.99
LSM4-203ENST00000593829 KIAA1586Q9HCI6 787 aa21.25■□□□□ 0.99
LSM4-203ENST00000593829 ENTPD7Q9NQZ7 604 aa21.25■□□□□ 0.99
LSM4-203ENST00000593829 KCND1Q9NSA2 647 aa21.25■□□□□ 0.99
LSM4-203ENST00000593829 ADAM28Q9UKQ2 775 aa21.25■□□□□ 0.99
LSM4-203ENST00000593829 MAPK8IP1Q9UQF2 711 aa21.25■□□□□ 0.99
LSM4-203ENST00000593829 PDXKO00764 312 aa21.25■□□□□ 0.99
LSM4-203ENST00000593829 FSCN2O14926 492 aa21.25■□□□□ 0.99
LSM4-203ENST00000593829 XPOTO43592 962 aaKnown RBP21.25■□□□□ 0.99
LSM4-203ENST00000593829 CLCNKBP51801 687 aa21.25■□□□□ 0.99
LSM4-203ENST00000593829 BMS1Q14692 1282 aaKnown RBP21.25■□□□□ 0.99
LSM4-203ENST00000593829 ZBTB6Q15916 424 aa21.25■□□□□ 0.99
LSM4-203ENST00000593829 C12orf56Q8IXR9 622 aa21.25■□□□□ 0.99
LSM4-203ENST00000593829 DRC7Q8IY82 874 aa21.25■□□□□ 0.99
LSM4-203ENST00000593829 VN1R3Q9BXE9 311 aa21.25■□□□□ 0.99
LSM4-203ENST00000593829 NGRNQ9NPE2 291 aaKnown RBP21.25■□□□□ 0.99
LSM4-203ENST00000593829 RBAKQ9NYW8 714 aaPredicted RBP21.25■□□□□ 0.99
LSM4-203ENST00000593829 OGFRQ9NZT2 677 aa21.25■□□□□ 0.99
LSM4-203ENST00000593829 UBQLN1Q9UMX0 589 aaKnown RBP21.25■□□□□ 0.99
LSM4-203ENST00000593829 DERAQ9Y315 318 aa21.25■□□□□ 0.99
LSM4-203ENST00000593829 PRRC2BQ5JSZ5 2229 aaKnown RBP21.25■□□□□ 0.99
LSM4-203ENST00000593829 TNNT1P13805 278 aa21.24■□□□□ 0.99
LSM4-203ENST00000593829 RPL9P32969 192 aaKnown RBP21.24■□□□□ 0.99
LSM4-203ENST00000593829 IQCB1Q15051 598 aa21.24■□□□□ 0.99
LSM4-203ENST00000593829 UPP1Q16831 310 aa21.24■□□□□ 0.99
LSM4-203ENST00000593829 JADE1Q6IE81 842 aa21.24■□□□□ 0.99
LSM4-203ENST00000593829 DCLRE1AQ6PJP8 1040 aa21.24■□□□□ 0.99
LSM4-203ENST00000593829 BRSK2Q8IWQ3 736 aa21.24■□□□□ 0.99
LSM4-203ENST00000593829 ZNF233A6NK53 670 aa21.23■□□□□ 0.99
LSM4-203ENST00000593829 KIF4AO95239 1232 aa21.23■□□□□ 0.99
LSM4-203ENST00000593829 CYP3A5P20815 502 aa21.23■□□□□ 0.99
LSM4-203ENST00000593829 CYP2J2P51589 502 aa21.23■□□□□ 0.99
LSM4-203ENST00000593829 LRMPQ12912 555 aa21.23■□□□□ 0.99
LSM4-203ENST00000593829 TMEM132DQ14C87 1099 aa21.23■□□□□ 0.99
LSM4-203ENST00000593829 SMYD4Q8IYR2 804 aaPredicted RBP21.23■□□□□ 0.99
LSM4-203ENST00000593829 XXYLT1Q8NBI6 393 aa21.23■□□□□ 0.99
LSM4-203ENST00000593829 PPP2R3CQ969Q6 453 aa21.23■□□□□ 0.99
LSM4-203ENST00000593829 FBXL18Q96ME1 805 aa21.23■□□□□ 0.99
LSM4-203ENST00000593829 TUBGCP4Q9UGJ1 667 aa21.23■□□□□ 0.99
LSM4-203ENST00000593829 C2CD2Q9Y426 696 aa21.23■□□□□ 0.99
LSM4-203ENST00000593829 TMEM189-UBE2V1I3L0A0 370 aa21.23■□□□□ 0.99
LSM4-203ENST00000593829 B3GAT3O94766 335 aa21.23■□□□□ 0.99
LSM4-203ENST00000593829 SMC1AQ14683 1233 aaKnown RBP21.23■□□□□ 0.99
LSM4-203ENST00000593829 TCEAL5Q5H9L2 206 aa21.23■□□□□ 0.99
LSM4-203ENST00000593829 PLPP4Q5VZY2 271 aa21.23■□□□□ 0.99
LSM4-203ENST00000593829 FUT10Q6P4F1 479 aa21.23■□□□□ 0.99
LSM4-203ENST00000593829 ZBP1Q9H171 429 aa21.23■□□□□ 0.99
LSM4-203ENST00000593829 MAN1B1Q9UKM7 699 aa21.23■□□□□ 0.99
LSM4-203ENST00000593829 PCDHGC5Q9Y5F6 944 aa21.23■□□□□ 0.99
LSM4-203ENST00000593829 TULP1O00294 542 aaPredicted RBP21.22■□□□□ 0.99
LSM4-203ENST00000593829 PODXLO00592 558 aa21.22■□□□□ 0.99
LSM4-203ENST00000593829 CALUO43852 315 aaPredicted RBP21.22■□□□□ 0.99
LSM4-203ENST00000593829 EFEMP2O95967 443 aa21.22■□□□□ 0.99
LSM4-203ENST00000593829 SOD2P04179 222 aa21.22■□□□□ 0.99
LSM4-203ENST00000593829 NFICP08651 508 aa21.22■□□□□ 0.99
LSM4-203ENST00000593829 CTSAP10619 480 aa21.22■□□□□ 0.99
LSM4-203ENST00000593829 CBWD2Q8IUF1 395 aa21.22■□□□□ 0.99
LSM4-203ENST00000593829 BEST2Q8NFU1 509 aa21.22■□□□□ 0.99
LSM4-203ENST00000593829 HASPINQ8TF76 798 aa21.22■□□□□ 0.99
LSM4-203ENST00000593829 CACTINQ8WUQ7 758 aaKnown RBP21.22■□□□□ 0.99
LSM4-203ENST00000593829 TMEM174Q8WUU8 243 aa21.22■□□□□ 0.99
LSM4-203ENST00000593829 DNAJC25Q9H1X3 360 aa21.22■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms