RNA–Protein interactions for RNA: ENST00000592395.5

TCF3-216, Transcript of transcription factor 3, humanhuman

TSL 5

Gene TCF3, Length 996 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF3-216ENST00000592395 SSX2IPQ9Y2D8 614 aa20.24■□□□□ 0.83
TCF3-216ENST00000592395 HAX1O00165 279 aa20.23■□□□□ 0.83
TCF3-216ENST00000592395 PODXLO00592 558 aa20.23■□□□□ 0.83
TCF3-216ENST00000592395 TGFB1I1O43294 461 aa20.23■□□□□ 0.83
TCF3-216ENST00000592395 EXTL3O43909 919 aa20.23■□□□□ 0.83
TCF3-216ENST00000592395 B3GAT3O94766 335 aa20.23■□□□□ 0.83
TCF3-216ENST00000592395 IL18RAPO95256 599 aa20.23■□□□□ 0.83
TCF3-216ENST00000592395 CYP3A5P20815 502 aa20.23■□□□□ 0.83
TCF3-216ENST00000592395 GLUD2P49448 558 aa20.23■□□□□ 0.83
TCF3-216ENST00000592395 SPAG1Q07617 926 aa20.23■□□□□ 0.83
TCF3-216ENST00000592395 ADAM15Q13444 863 aa20.23■□□□□ 0.83
TCF3-216ENST00000592395 KNOP1Q1ED39 458 aaKnown RBP20.23■□□□□ 0.83
TCF3-216ENST00000592395 AAK1Q2M2I8 961 aa20.23■□□□□ 0.83
TCF3-216ENST00000592395 USP41Q3LFD5 358 aa20.23■□□□□ 0.83
TCF3-216ENST00000592395 KIAA1841Q6NSI8 718 aa20.23■□□□□ 0.83
TCF3-216ENST00000592395 HS2ST1Q7LGA3 356 aa20.23■□□□□ 0.83
TCF3-216ENST00000592395 TAS1R1Q7RTX1 841 aa20.23■□□□□ 0.83
TCF3-216ENST00000592395 GPD1LQ8N335 351 aa20.23■□□□□ 0.83
TCF3-216ENST00000592395 PCIF1Q9H4Z3 704 aa20.23■□□□□ 0.83
TCF3-216ENST00000592395 AGPAT3Q9NRZ7 376 aa20.23■□□□□ 0.83
TCF3-216ENST00000592395 CHST7Q9NS84 486 aa20.23■□□□□ 0.83
TCF3-216ENST00000592395 CGNQ9P2M7 1197 aaKnown RBP20.23■□□□□ 0.83
TCF3-216ENST00000592395 TUBGCP4Q9UGJ1 667 aa20.23■□□□□ 0.83
TCF3-216ENST00000592395 DERAQ9Y315 318 aa20.23■□□□□ 0.83
TCF3-216ENST00000592395 KINO60870 393 aaKnown RBP20.22■□□□□ 0.83
TCF3-216ENST00000592395 UBE2HP62256 183 aa20.22■□□□□ 0.83
TCF3-216ENST00000592395 DSG1Q02413 1049 aa20.22■□□□□ 0.83
TCF3-216ENST00000592395 PNOCQ13519 176 aa20.22■□□□□ 0.83
TCF3-216ENST00000592395 TMEM132DQ14C87 1099 aa20.22■□□□□ 0.83
TCF3-216ENST00000592395 JADE1Q6IE81 842 aa20.22■□□□□ 0.83
TCF3-216ENST00000592395 EP400NLQ6ZTU2 488 aa20.22■□□□□ 0.83
TCF3-216ENST00000592395 BRSK2Q8IWQ3 736 aa20.22■□□□□ 0.83
TCF3-216ENST00000592395 ELOA2Q8IYF1 753 aaPredicted RBP20.22■□□□□ 0.83
TCF3-216ENST00000592395 GPR65Q8IYL9 337 aa20.22■□□□□ 0.83
TCF3-216ENST00000592395 C3orf58Q8NDZ4 430 aa20.22■□□□□ 0.83
TCF3-216ENST00000592395 MS4A3Q96HJ5 214 aa20.22■□□□□ 0.83
TCF3-216ENST00000592395 EMILIN2Q9BXX0 1053 aa20.22■□□□□ 0.83
TCF3-216ENST00000592395 HSPBP1Q9NZL4 362 aa20.22■□□□□ 0.83
TCF3-216ENST00000592395 C2CD2Q9Y426 696 aa20.22■□□□□ 0.83
TCF3-216ENST00000592395 GOLGA8IPA6NC78 632 aa20.21■□□□□ 0.83
TCF3-216ENST00000592395 GOLGA8JA6NMD2 632 aa20.21■□□□□ 0.83
TCF3-216ENST00000592395 LINC01565O15544 149 aa20.21■□□□□ 0.83
TCF3-216ENST00000592395 TRAPPC3O43617 180 aa20.21■□□□□ 0.83
TCF3-216ENST00000592395 LILRB3O75022 631 aa20.21■□□□□ 0.83
TCF3-216ENST00000592395 KIF20AO95235 890 aa20.21■□□□□ 0.83
TCF3-216ENST00000592395 NFICP08651 508 aa20.21■□□□□ 0.83
TCF3-216ENST00000592395 KCNA5P22460 613 aa20.21■□□□□ 0.83
TCF3-216ENST00000592395 LRPAP1P30533 357 aa20.21■□□□□ 0.83
TCF3-216ENST00000592395 MRPS5P82675 430 aaKnown RBP20.21■□□□□ 0.83
TCF3-216ENST00000592395 TFF2Q03403 129 aa20.21■□□□□ 0.83
TCF3-216ENST00000592395 KIAA0319Q5VV43 1072 aa20.21■□□□□ 0.83
TCF3-216ENST00000592395 SPATA1Q5VX52 437 aa20.21■□□□□ 0.83
TCF3-216ENST00000592395 CD300LGQ6UXG3 332 aa20.21■□□□□ 0.83
TCF3-216ENST00000592395 ZSWIM2Q8NEG5 633 aa20.21■□□□□ 0.83
TCF3-216ENST00000592395 BEST2Q8NFU1 509 aa20.21■□□□□ 0.83
TCF3-216ENST00000592395 GOLGA5Q8TBA6 731 aa20.21■□□□□ 0.83
TCF3-216ENST00000592395 KIAA1586Q9HCI6 787 aa20.21■□□□□ 0.83
TCF3-216ENST00000592395 RMND1Q9NWS8 449 aa20.21■□□□□ 0.83
TCF3-216ENST00000592395 RBAKQ9NYW8 714 aaPredicted RBP20.21■□□□□ 0.83
TCF3-216ENST00000592395 BRWD1Q9NSI6 2320 aa20.21■□□□□ 0.83
TCF3-216ENST00000592395 VWA8A3KMH1 1905 aa20.21■□□□□ 0.83
TCF3-216ENST00000592395 C2CD2LO14523 706 aa20.2■□□□□ 0.82
TCF3-216ENST00000592395 CLASP2O75122 1294 aaKnown RBP20.2■□□□□ 0.82
TCF3-216ENST00000592395 TBX10O75333 385 aa20.2■□□□□ 0.82
TCF3-216ENST00000592395 SMC2O95347 1197 aa20.2■□□□□ 0.82
TCF3-216ENST00000592395 GLP2RO95838 553 aa20.2■□□□□ 0.82
TCF3-216ENST00000592395 SRGAP2BP0DMP2 458 aa20.2■□□□□ 0.82
TCF3-216ENST00000592395 LTBRP36941 435 aa20.2■□□□□ 0.82
TCF3-216ENST00000592395 NDUFV1P49821 464 aa20.2■□□□□ 0.82
TCF3-216ENST00000592395 KCNC3Q14003 757 aa20.2■□□□□ 0.82
TCF3-216ENST00000592395 LEXMQ3ZCV2 418 aa20.2■□□□□ 0.82
TCF3-216ENST00000592395 FAM171A1Q5VUB5 890 aa20.2■□□□□ 0.82
TCF3-216ENST00000592395 PDZRN4Q6ZMN7 1036 aaPredicted RBP20.2■□□□□ 0.82
TCF3-216ENST00000592395 CLEC17AQ6ZS10 378 aa20.2■□□□□ 0.82
TCF3-216ENST00000592395 NT5DC4Q86YG4 428 aa20.2■□□□□ 0.82
TCF3-216ENST00000592395 C12orf56Q8IXR9 622 aa20.2■□□□□ 0.82
TCF3-216ENST00000592395 NOC3LQ8WTT2 800 aaKnown RBP20.2■□□□□ 0.82
TCF3-216ENST00000592395 ASB2Q96Q27 587 aa20.2■□□□□ 0.82
TCF3-216ENST00000592395 GSDMAQ96QA5 445 aa20.2■□□□□ 0.82
TCF3-216ENST00000592395 TTPALQ9BTX7 342 aa20.2■□□□□ 0.82
TCF3-216ENST00000592395 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP20.2■□□□□ 0.82
TCF3-216ENST00000592395 NUB1Q9Y5A7 615 aa20.2■□□□□ 0.82
TCF3-216ENST00000592395 ZNF233A6NK53 670 aa20.19■□□□□ 0.82
TCF3-216ENST00000592395 CLIC2O15247 247 aa20.19■□□□□ 0.82
TCF3-216ENST00000592395 IGFBP6P24592 240 aaPredicted RBP20.19■□□□□ 0.82
TCF3-216ENST00000592395 CREMQ03060 361 aa20.19■□□□□ 0.82
TCF3-216ENST00000592395 TMEM184AQ6ZMB5 413 aa20.19■□□□□ 0.82
TCF3-216ENST00000592395 PPFIBP1Q86W92 1011 aa20.19■□□□□ 0.82
TCF3-216ENST00000592395 VN1R2Q8NFZ6 395 aa20.19■□□□□ 0.82
TCF3-216ENST00000592395 RIN2Q8WYP3 895 aaPredicted RBP20.19■□□□□ 0.82
TCF3-216ENST00000592395 B3GALT6Q96L58 329 aa20.19■□□□□ 0.82
TCF3-216ENST00000592395 FBXL18Q96ME1 805 aa20.19■□□□□ 0.82
TCF3-216ENST00000592395 KLHL5Q96PQ7 755 aa20.19■□□□□ 0.82
TCF3-216ENST00000592395 RXFP1Q9HBX9 757 aa20.19■□□□□ 0.82
TCF3-216ENST00000592395 RYDENQ9NUL5 291 aaKnown RBP20.19■□□□□ 0.82
TCF3-216ENST00000592395 HCFC2Q9Y5Z7 792 aa20.19■□□□□ 0.82
TCF3-216ENST00000592395 PRPF40AO75400 957 aaKnown RBP20.18■□□□□ 0.82
TCF3-216ENST00000592395 ADH1AP07327 375 aa20.18■□□□□ 0.82
TCF3-216ENST00000592395 CNPP09543 421 aaKnown RBP20.18■□□□□ 0.82
TCF3-216ENST00000592395 FGFR3P22607 806 aa20.18■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms