RNA–Protein interactions for RNA: ENST00000590096.1

ATG4D-212, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 5

Gene ATG4D, Length 1,282 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-212ENST00000590096 HERC2P3Q9BVR0 1158 aa23.1■■□□□ 1.29
ATG4D-212ENST00000590096 VN1R3Q9BXE9 311 aa23.1■■□□□ 1.29
ATG4D-212ENST00000590096 CLSTN2Q9H4D0 955 aa23.1■■□□□ 1.29
ATG4D-212ENST00000590096 NR3C1P04150 777 aa23.09■■□□□ 1.29
ATG4D-212ENST00000590096 URODP06132 367 aa23.09■■□□□ 1.29
ATG4D-212ENST00000590096 SURF1Q15526 300 aa23.09■■□□□ 1.29
ATG4D-212ENST00000590096 COBLL1Q53SF7 1204 aa23.09■■□□□ 1.29
ATG4D-212ENST00000590096 SPATA1Q5VX52 437 aa23.09■■□□□ 1.29
ATG4D-212ENST00000590096 ISM2Q6H9L7 571 aa23.09■■□□□ 1.29
ATG4D-212ENST00000590096 SLC9A9Q8IVB4 645 aa23.09■■□□□ 1.29
ATG4D-212ENST00000590096 TRAF3IP3Q9Y228 551 aa23.09■■□□□ 1.29
ATG4D-212ENST00000590096 PCDHGC5Q9Y5F6 944 aa23.09■■□□□ 1.29
ATG4D-212ENST00000590096 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP23.08■■□□□ 1.29
ATG4D-212ENST00000590096 TRAPPC3O43617 180 aa23.08■■□□□ 1.29
ATG4D-212ENST00000590096 CXCL14O95715 111 aa23.08■■□□□ 1.29
ATG4D-212ENST00000590096 LRPAP1P30533 357 aa23.08■■□□□ 1.29
ATG4D-212ENST00000590096 PRCPP42785 496 aa23.08■■□□□ 1.29
ATG4D-212ENST00000590096 MYBPC2Q14324 1141 aa23.08■■□□□ 1.29
ATG4D-212ENST00000590096 USP41Q3LFD5 358 aa23.08■■□□□ 1.29
ATG4D-212ENST00000590096 KIAA1841Q6NSI8 718 aa23.08■■□□□ 1.29
ATG4D-212ENST00000590096 CACTINQ8WUQ7 758 aaKnown RBP23.08■■□□□ 1.29
ATG4D-212ENST00000590096 GPR62Q9BZJ7 368 aa23.08■■□□□ 1.29
ATG4D-212ENST00000590096 NUP62CLQ9H1M0 184 aa23.08■■□□□ 1.29
ATG4D-212ENST00000590096 PDE11AQ9HCR9 933 aa23.08■■□□□ 1.29
ATG4D-212ENST00000590096 MRPL17Q9NRX2 175 aaKnown RBP23.08■■□□□ 1.29
ATG4D-212ENST00000590096 KIAA1468Q9P260 1216 aa23.08■■□□□ 1.29
ATG4D-212ENST00000590096 SSX2IPQ9Y2D8 614 aa23.08■■□□□ 1.29
ATG4D-212ENST00000590096 NUB1Q9Y5A7 615 aa23.08■■□□□ 1.29
ATG4D-212ENST00000590096 BIN1O00499 593 aa23.07■■□□□ 1.28
ATG4D-212ENST00000590096 EFEMP2O95967 443 aa23.07■■□□□ 1.28
ATG4D-212ENST00000590096 PPP1R2P41236 205 aa23.07■■□□□ 1.28
ATG4D-212ENST00000590096 GLUD2P49448 558 aa23.07■■□□□ 1.28
ATG4D-212ENST00000590096 GUCY2FP51841 1108 aa23.07■■□□□ 1.28
ATG4D-212ENST00000590096 TFAMQ00059 246 aaKnown RBP23.07■■□□□ 1.28
ATG4D-212ENST00000590096 EFCAB13Q8IY85 973 aa23.07■■□□□ 1.28
ATG4D-212ENST00000590096 RNF168Q8IYW5 571 aaPredicted RBP23.07■■□□□ 1.28
ATG4D-212ENST00000590096 C3orf58Q8NDZ4 430 aa23.07■■□□□ 1.28
ATG4D-212ENST00000590096 TMEM174Q8WUU8 243 aa23.07■■□□□ 1.28
ATG4D-212ENST00000590096 AUTS2Q8WXX7 1259 aa23.07■■□□□ 1.28
ATG4D-212ENST00000590096 TSG101Q99816 390 aa23.07■■□□□ 1.28
ATG4D-212ENST00000590096 TLE6Q9H808 572 aa23.07■■□□□ 1.28
ATG4D-212ENST00000590096 TTC28Q96AY4 2481 aa23.07■■□□□ 1.28
ATG4D-212ENST00000590096 C2orf71A6NGG8 1288 aa23.06■■□□□ 1.28
ATG4D-212ENST00000590096 HIDE1A8MVS5 230 aa23.06■■□□□ 1.28
ATG4D-212ENST00000590096 NR2F2P24468 414 aa23.06■■□□□ 1.28
ATG4D-212ENST00000590096 RPL13P26373 211 aaKnown RBP23.06■■□□□ 1.28
ATG4D-212ENST00000590096 CYP24A1Q07973 514 aa23.06■■□□□ 1.28
ATG4D-212ENST00000590096 MORC3Q14149 939 aa23.06■■□□□ 1.28
ATG4D-212ENST00000590096 PTPN14Q15678 1187 aa23.06■■□□□ 1.28
ATG4D-212ENST00000590096 NFIL3Q16649 462 aa23.06■■□□□ 1.28
ATG4D-212ENST00000590096 FAM171A1Q5VUB5 890 aa23.06■■□□□ 1.28
ATG4D-212ENST00000590096 TAS1R1Q7RTX1 841 aa23.06■■□□□ 1.28
ATG4D-212ENST00000590096 ADGRD2Q7Z7M1 963 aa23.06■■□□□ 1.28
ATG4D-212ENST00000590096 RBM23Q86U06 439 aaKnown RBP23.06■■□□□ 1.28
ATG4D-212ENST00000590096 ADSSL1Q8N142 457 aa23.06■■□□□ 1.28
ATG4D-212ENST00000590096 MRPL43Q8N983 215 aaKnown RBP23.06■■□□□ 1.28
ATG4D-212ENST00000590096 TRIML1Q8N9V2 468 aa23.06■■□□□ 1.28
ATG4D-212ENST00000590096 FNBP1Q96RU3 617 aa23.06■■□□□ 1.28
ATG4D-212ENST00000590096 IGFLR1Q9H665 355 aa23.06■■□□□ 1.28
ATG4D-212ENST00000590096 DMAC2Q9NW81 257 aa23.06■■□□□ 1.28
ATG4D-212ENST00000590096 DPP3Q9NY33 737 aa23.06■■□□□ 1.28
ATG4D-212ENST00000590096 FRMD4BQ9Y2L6 1034 aa23.06■■□□□ 1.28
ATG4D-212ENST00000590096 IRAK3Q9Y616 596 aa23.06■■□□□ 1.28
ATG4D-212ENST00000590096 FSD2A1L4K1 749 aa23.05■■□□□ 1.28
ATG4D-212ENST00000590096 C2CD2LO14523 706 aa23.05■■□□□ 1.28
ATG4D-212ENST00000590096 PSMA7O14818 248 aa23.05■■□□□ 1.28
ATG4D-212ENST00000590096 NCK2O43639 380 aa23.05■■□□□ 1.28
ATG4D-212ENST00000590096 TMEM191BP0C7N4 346 aa23.05■■□□□ 1.28
ATG4D-212ENST00000590096 MCM4P33991 863 aa23.05■■□□□ 1.28
ATG4D-212ENST00000590096 NRIP1P48552 1158 aa23.05■■□□□ 1.28
ATG4D-212ENST00000590096 WNT7BP56706 349 aa23.05■■□□□ 1.28
ATG4D-212ENST00000590096 DSG1Q02413 1049 aa23.05■■□□□ 1.28
ATG4D-212ENST00000590096 CEP135Q66GS9 1140 aa23.05■■□□□ 1.28
ATG4D-212ENST00000590096 CEP57Q86XR8 500 aa23.05■■□□□ 1.28
ATG4D-212ENST00000590096 GPT2Q8TD30 523 aa23.05■■□□□ 1.28
ATG4D-212ENST00000590096 ANKRD36BP1Q96IX9 119 aa23.05■■□□□ 1.28
ATG4D-212ENST00000590096 CDCA3Q99618 268 aaPredicted RBP23.05■■□□□ 1.28
ATG4D-212ENST00000590096 TTPALQ9BTX7 342 aa23.05■■□□□ 1.28
ATG4D-212ENST00000590096 MBD3O95983 291 aa23.04■■□□□ 1.28
ATG4D-212ENST00000590096 DLATP10515 647 aaKnown RBP23.04■■□□□ 1.28
ATG4D-212ENST00000590096 BRCC3P46736 316 aa23.04■■□□□ 1.28
ATG4D-212ENST00000590096 HYAL1Q12794 435 aa23.04■■□□□ 1.28
ATG4D-212ENST00000590096 PSMD6Q15008 389 aa23.04■■□□□ 1.28
ATG4D-212ENST00000590096 EDRF1Q3B7T1 1238 aa23.04■■□□□ 1.28
ATG4D-212ENST00000590096 ZCWPW2Q504Y3 356 aa23.04■■□□□ 1.28
ATG4D-212ENST00000590096 C9orf57Q5W0N0 161 aa23.04■■□□□ 1.28
ATG4D-212ENST00000590096 CENPPQ6IPU0 288 aa23.04■■□□□ 1.28
ATG4D-212ENST00000590096 CD300LGQ6UXG3 332 aa23.04■■□□□ 1.28
ATG4D-212ENST00000590096 PDZRN4Q6ZMN7 1036 aaPredicted RBP23.04■■□□□ 1.28
ATG4D-212ENST00000590096 TMEM130Q8N3G9 435 aa23.04■■□□□ 1.28
ATG4D-212ENST00000590096 MFSD14AQ96MC6 490 aa23.04■■□□□ 1.28
ATG4D-212ENST00000590096 EMILIN2Q9BXX0 1053 aa23.04■■□□□ 1.28
ATG4D-212ENST00000590096 CHST7Q9NS84 486 aa23.04■■□□□ 1.28
ATG4D-212ENST00000590096 PER2O15055 1255 aa23.03■■□□□ 1.28
ATG4D-212ENST00000590096 TNNC2P02585 160 aa23.03■■□□□ 1.28
ATG4D-212ENST00000590096 TNNI1P19237 187 aa23.03■■□□□ 1.28
ATG4D-212ENST00000590096 IGFBP6P24592 240 aaPredicted RBP23.03■■□□□ 1.28
ATG4D-212ENST00000590096 ADAM9Q13443 819 aa23.03■■□□□ 1.28
ATG4D-212ENST00000590096 DUSP6Q16828 381 aa23.03■■□□□ 1.28
ATG4D-212ENST00000590096 KIAA0319Q5VV43 1072 aa23.03■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms