RNA–Protein interactions for RNA: ENST00000589253.1

TOMM40-204, Transcript of translocase of outer mitochondrial membrane 40, humanhuman

TSL 3

Gene TOMM40, Length 207 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOMM40-204ENST00000589253 TMEM175Q9BSA9 504 aa12.75□□□□□ -0.37
TOMM40-204ENST00000589253 EIF2AQ9BY44 585 aaKnown RBP12.75□□□□□ -0.37
TOMM40-204ENST00000589253 ST6GALNAC4Q9H4F1 302 aa12.75□□□□□ -0.37
TOMM40-204ENST00000589253 PDZD7Q9H5P4 517 aa12.75□□□□□ -0.37
TOMM40-204ENST00000589253 WDR6Q9NNW5 1121 aaKnown RBP12.75□□□□□ -0.37
TOMM40-204ENST00000589253 OLFML3Q9NRN5 406 aa12.75□□□□□ -0.37
TOMM40-204ENST00000589253 PRMT7Q9NVM4 692 aaPredicted RBP12.75□□□□□ -0.37
TOMM40-204ENST00000589253 SEL1LQ9UBV2 794 aa12.75□□□□□ -0.37
TOMM40-204ENST00000589253 SIT1Q9Y3P8 196 aa12.75□□□□□ -0.37
TOMM40-204ENST00000589253 KRBA1A5PL33 1030 aa12.74□□□□□ -0.37
TOMM40-204ENST00000589253 MEIS3P2A8K0S8 358 aa12.74□□□□□ -0.37
TOMM40-204ENST00000589253 INPPL1O15357 1258 aa12.74□□□□□ -0.37
TOMM40-204ENST00000589253 ZNF623O75123 536 aa12.74□□□□□ -0.37
TOMM40-204ENST00000589253 EFNA5P52803 228 aa12.74□□□□□ -0.37
TOMM40-204ENST00000589253 GTF2BQ00403 316 aa12.74□□□□□ -0.37
TOMM40-204ENST00000589253 POSTNQ15063 836 aa12.74□□□□□ -0.37
TOMM40-204ENST00000589253 PCBP1Q15365 356 aaKnown RBP eCLIP12.74□□□□□ -0.37
TOMM40-204ENST00000589253 KMT5BQ4FZB7 885 aa12.74□□□□□ -0.37
TOMM40-204ENST00000589253 SLC39A4Q6P5W5 647 aa12.74□□□□□ -0.37
TOMM40-204ENST00000589253 ZNF720Q7Z2F6 126 aa12.74□□□□□ -0.37
TOMM40-204ENST00000589253 CCDC65Q8IXS2 484 aa12.74□□□□□ -0.37
TOMM40-204ENST00000589253 KIAA0895Q8NCT3 520 aa12.74□□□□□ -0.37
TOMM40-204ENST00000589253 GPT2Q8TD30 523 aa12.74□□□□□ -0.37
TOMM40-204ENST00000589253 RSAD2Q8WXG1 361 aa12.74□□□□□ -0.37
TOMM40-204ENST00000589253 SMG7Q92540 1137 aaKnown RBP12.74□□□□□ -0.37
TOMM40-204ENST00000589253 TARS2Q9BW92 718 aaKnown RBP12.74□□□□□ -0.37
TOMM40-204ENST00000589253 VN1R3Q9BXE9 311 aa12.74□□□□□ -0.37
TOMM40-204ENST00000589253 LRRC27Q9C0I9 530 aa12.74□□□□□ -0.37
TOMM40-204ENST00000589253 HAPLN2Q9GZV7 340 aa12.74□□□□□ -0.37
TOMM40-204ENST00000589253 RSAD1Q9HA92 442 aa12.74□□□□□ -0.37
TOMM40-204ENST00000589253 ARHGEF3Q9NR81 526 aa12.74□□□□□ -0.37
TOMM40-204ENST00000589253 EPS15L1Q9UBC2 864 aa12.74□□□□□ -0.37
TOMM40-204ENST00000589253 PCDHB2Q9Y5E7 798 aa12.74□□□□□ -0.37
TOMM40-204ENST00000589253 ZMYM2Q9UBW7 1377 aa12.73□□□□□ -0.37
TOMM40-204ENST00000589253 SCN1AP35498 2009 aa12.73□□□□□ -0.37
TOMM40-204ENST00000589253 C2orf16Q68DN1 1984 aa12.73□□□□□ -0.37
TOMM40-204ENST00000589253 A0A1B0GUA9 196 aa12.73□□□□□ -0.37
TOMM40-204ENST00000589253 PVALEFA0A1B0GWK0 134 aa12.73□□□□□ -0.37
TOMM40-204ENST00000589253 TISP43B9A030 160 aa12.73□□□□□ -0.37
TOMM40-204ENST00000589253 K7ERI5 159 aa12.73□□□□□ -0.37
TOMM40-204ENST00000589253 KINO60870 393 aaKnown RBP12.73□□□□□ -0.37
TOMM40-204ENST00000589253 SOD2P04179 222 aa12.73□□□□□ -0.37
TOMM40-204ENST00000589253 RPN1P04843 607 aaKnown RBP12.73□□□□□ -0.37
TOMM40-204ENST00000589253 DCNP07585 359 aaKnown RBP12.73□□□□□ -0.37
TOMM40-204ENST00000589253 PROZP22891 400 aa12.73□□□□□ -0.37
TOMM40-204ENST00000589253 AXLP30530 894 aa12.73□□□□□ -0.37
TOMM40-204ENST00000589253 HOXD13P35453 343 aa12.73□□□□□ -0.37
TOMM40-204ENST00000589253 GLUD2P49448 558 aa12.73□□□□□ -0.37
TOMM40-204ENST00000589253 SMTNP53814 917 aa12.73□□□□□ -0.37
TOMM40-204ENST00000589253 PRPF4BQ13523 1007 aaKnown RBP12.73□□□□□ -0.37
TOMM40-204ENST00000589253 FAM26FQ5R3K3 315 aa12.73□□□□□ -0.37
TOMM40-204ENST00000589253 PHLDB3Q6NSJ2 640 aa12.73□□□□□ -0.37
TOMM40-204ENST00000589253 EPM2AIP1Q7L775 607 aaPredicted RBP12.73□□□□□ -0.37
TOMM40-204ENST00000589253 ZNF280BQ86YH2 543 aa12.73□□□□□ -0.37
TOMM40-204ENST00000589253 MAP4K3Q8IVH8 894 aa12.73□□□□□ -0.37
TOMM40-204ENST00000589253 C1orf210Q8IVY1 113 aa12.73□□□□□ -0.37
TOMM40-204ENST00000589253 SLC44A3Q8N4M1 653 aa12.73□□□□□ -0.37
TOMM40-204ENST00000589253 SHDQ96IW2 340 aa12.73□□□□□ -0.37
TOMM40-204ENST00000589253 ZBTB45Q96K62 511 aaPredicted RBP12.73□□□□□ -0.37
TOMM40-204ENST00000589253 RPS6KC1Q96S38 1066 aa12.73□□□□□ -0.37
TOMM40-204ENST00000589253 ACO2Q99798 780 aaKnown RBP12.73□□□□□ -0.37
TOMM40-204ENST00000589253 HERC2P3Q9BVR0 1158 aa12.73□□□□□ -0.37
TOMM40-204ENST00000589253 RHOBTB2Q9BYZ6 727 aa12.73□□□□□ -0.37
TOMM40-204ENST00000589253 MRPL44Q9H9J2 332 aaKnown RBP12.73□□□□□ -0.37
TOMM40-204ENST00000589253 PTPRHQ9HD43 1115 aa12.73□□□□□ -0.37
TOMM40-204ENST00000589253 UBN1Q9NPG3 1134 aa12.73□□□□□ -0.37
TOMM40-204ENST00000589253 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.73□□□□□ -0.37
TOMM40-204ENST00000589253 TBX20Q9UMR3 447 aa12.73□□□□□ -0.37
TOMM40-204ENST00000589253 DMXL1Q9Y485 3027 aa12.73□□□□□ -0.37
TOMM40-204ENST00000589253 NRP1O14786 923 aa12.72□□□□□ -0.37
TOMM40-204ENST00000589253 N4BP1O75113 896 aaKnown RBP12.72□□□□□ -0.37
TOMM40-204ENST00000589253 PRPF6O94906 941 aaKnown RBP12.72□□□□□ -0.37
TOMM40-204ENST00000589253 GCNT3O95395 438 aa12.72□□□□□ -0.37
TOMM40-204ENST00000589253 NPTXRO95502 500 aa12.72□□□□□ -0.37
TOMM40-204ENST00000589253 POMCP01189 267 aa12.72□□□□□ -0.37
TOMM40-204ENST00000589253 PIGRP01833 764 aa12.72□□□□□ -0.37
TOMM40-204ENST00000589253 MYL1P05976 194 aa12.72□□□□□ -0.37
TOMM40-204ENST00000589253 SP9P0CG40 484 aa12.72□□□□□ -0.37
TOMM40-204ENST00000589253 SDHBP21912 280 aa12.72□□□□□ -0.37
TOMM40-204ENST00000589253 OR1G1P47890 313 aa12.72□□□□□ -0.37
TOMM40-204ENST00000589253 STK4Q13043 487 aa12.72□□□□□ -0.37
TOMM40-204ENST00000589253 ATF7IP2Q5U623 682 aa12.72□□□□□ -0.37
TOMM40-204ENST00000589253 NOTUMQ6P988 496 aa12.72□□□□□ -0.37
TOMM40-204ENST00000589253 DCLRE1AQ6PJP8 1040 aa12.72□□□□□ -0.37
TOMM40-204ENST00000589253 GET4Q7L5D6 327 aaPredicted RBP12.72□□□□□ -0.37
TOMM40-204ENST00000589253 ELOA2Q8IYF1 753 aaPredicted RBP12.72□□□□□ -0.37
TOMM40-204ENST00000589253 SMG8Q8ND04 991 aaKnown RBP12.72□□□□□ -0.37
TOMM40-204ENST00000589253 SPATA20Q8TB22 786 aa12.72□□□□□ -0.37
TOMM40-204ENST00000589253 FEZF2Q8TBJ5 459 aa12.72□□□□□ -0.37
TOMM40-204ENST00000589253 GPR152Q8TDT2 470 aa12.72□□□□□ -0.37
TOMM40-204ENST00000589253 SECISBP2LQ93073 1101 aaKnown RBP12.72□□□□□ -0.37
TOMM40-204ENST00000589253 CCDC51Q96ER9 411 aa12.72□□□□□ -0.37
TOMM40-204ENST00000589253 MRPL4Q9BYD3 311 aaKnown RBP12.72□□□□□ -0.37
TOMM40-204ENST00000589253 RNF39Q9H2S5 420 aa12.72□□□□□ -0.37
TOMM40-204ENST00000589253 NXF3Q9H4D5 531 aaKnown RBP12.72□□□□□ -0.37
TOMM40-204ENST00000589253 PRG3Q9Y2Y8 225 aaPredicted RBP12.72□□□□□ -0.37
TOMM40-204ENST00000589253 HES2Q9Y543 173 aa12.72□□□□□ -0.37
TOMM40-204ENST00000589253 GVINP1Q7Z2Y8 2422 aa12.72□□□□□ -0.37
TOMM40-204ENST00000589253 VWA8A3KMH1 1905 aa12.72□□□□□ -0.37
TOMM40-204ENST00000589253 ZNF292O60281 2723 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms