RNA–Protein interactions for RNA: ENST00000588860.5

SMAD4-206, Transcript of SMAD family member 4, humanhuman

TSL 4

Gene SMAD4, Length 779 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-206ENST00000588860 HOXC6P09630 235 aa9.42□□□□□ -0.9
SMAD4-206ENST00000588860 TMEM253P0C7T8 217 aa9.42□□□□□ -0.9
SMAD4-206ENST00000588860 ZNF865P0CJ78 1059 aaPredicted RBP9.42□□□□□ -0.9
SMAD4-206ENST00000588860 CHRNB2P17787 502 aa9.42□□□□□ -0.9
SMAD4-206ENST00000588860 TCP1P17987 556 aaKnown RBP9.42□□□□□ -0.9
SMAD4-206ENST00000588860 PROZP22891 400 aa9.42□□□□□ -0.9
SMAD4-206ENST00000588860 CYP2C19P33261 490 aa9.42□□□□□ -0.9
SMAD4-206ENST00000588860 PDE6CP51160 858 aa9.42□□□□□ -0.9
SMAD4-206ENST00000588860 AP3M2P53677 418 aa9.42□□□□□ -0.9
SMAD4-206ENST00000588860 GCNT1Q02742 428 aa9.42□□□□□ -0.9
SMAD4-206ENST00000588860 POU5F1BQ06416 359 aa9.42□□□□□ -0.9
SMAD4-206ENST00000588860 SURF1Q15526 300 aa9.42□□□□□ -0.9
SMAD4-206ENST00000588860 FAM187BQ17R55 369 aa9.42□□□□□ -0.9
SMAD4-206ENST00000588860 EEF1DP3Q658K8 133 aa9.42□□□□□ -0.9
SMAD4-206ENST00000588860 OLFML2BQ68BL8 750 aa9.42□□□□□ -0.9
SMAD4-206ENST00000588860 SPOPLQ6IQ16 392 aa9.42□□□□□ -0.9
SMAD4-206ENST00000588860 FBXO38Q6PIJ6 1188 aa9.42□□□□□ -0.9
SMAD4-206ENST00000588860 MTERF4Q7Z6M4 381 aaKnown RBP9.42□□□□□ -0.9
SMAD4-206ENST00000588860 TLK2Q86UE8 772 aa9.42□□□□□ -0.9
SMAD4-206ENST00000588860 SLC47A2Q86VL8 602 aa9.42□□□□□ -0.9
SMAD4-206ENST00000588860 WDR49Q8IV35 697 aa9.42□□□□□ -0.9
SMAD4-206ENST00000588860 THNSL1Q8IYQ7 743 aa9.42□□□□□ -0.9
SMAD4-206ENST00000588860 OR5B17Q8NGF7 314 aa9.42□□□□□ -0.9
SMAD4-206ENST00000588860 EPS8L1Q8TE68 723 aa9.42□□□□□ -0.9
SMAD4-206ENST00000588860 NLRP7Q8WX94 980 aa9.42□□□□□ -0.9
SMAD4-206ENST00000588860 SOCS4Q8WXH5 440 aa9.42□□□□□ -0.9
SMAD4-206ENST00000588860 CTNNBL1Q8WYA6 563 aaPredicted RBP9.42□□□□□ -0.9
SMAD4-206ENST00000588860 USP6NLQ92738 828 aa9.42□□□□□ -0.9
SMAD4-206ENST00000588860 CCDC102AQ96A19 550 aa9.42□□□□□ -0.9
SMAD4-206ENST00000588860 OSBPL9Q96SU4 736 aa9.42□□□□□ -0.9
SMAD4-206ENST00000588860 FDXACB1Q9BRP7 624 aaPredicted RBP9.42□□□□□ -0.9
SMAD4-206ENST00000588860 NFKBIZQ9BYH8 718 aa9.42□□□□□ -0.9
SMAD4-206ENST00000588860 AP5M1Q9H0R1 490 aa9.42□□□□□ -0.9
SMAD4-206ENST00000588860 CDT1Q9H211 546 aa9.42□□□□□ -0.9
SMAD4-206ENST00000588860 TAS2R14Q9NYV8 317 aa9.42□□□□□ -0.9
SMAD4-206ENST00000588860 NOCTQ9UK39 431 aaKnown RBP9.42□□□□□ -0.9
SMAD4-206ENST00000588860 CPSF3Q9UKF6 684 aaKnown RBP9.42□□□□□ -0.9
SMAD4-206ENST00000588860 GNEQ9Y223 722 aaKnown RBP9.42□□□□□ -0.9
SMAD4-206ENST00000588860 TNFSF13BQ9Y275 285 aa9.42□□□□□ -0.9
SMAD4-206ENST00000588860 PCDHGC5Q9Y5F6 944 aa9.42□□□□□ -0.9
SMAD4-206ENST00000588860 PCDHGA4Q9Y5G9 962 aa9.42□□□□□ -0.9
SMAD4-206ENST00000588860 RRN3P2A6NIE6 340 aa9.41□□□□□ -0.9
SMAD4-206ENST00000588860 TNNC2P02585 160 aa9.41□□□□□ -0.9
SMAD4-206ENST00000588860 MYL3P08590 195 aa9.41□□□□□ -0.9
SMAD4-206ENST00000588860 SMIM10L2AP0DMW4 78 aa9.41□□□□□ -0.9
SMAD4-206ENST00000588860 SMIM10L2BP0DMW5 78 aa9.41□□□□□ -0.9
SMAD4-206ENST00000588860 PRLRP16471 622 aa9.41□□□□□ -0.9
SMAD4-206ENST00000588860 ABCB4P21439 1286 aa9.41□□□□□ -0.9
SMAD4-206ENST00000588860 DNA2P51530 1060 aa9.41□□□□□ -0.9
SMAD4-206ENST00000588860 OSTNP61366 133 aa9.41□□□□□ -0.9
SMAD4-206ENST00000588860 TUBB4BP68371 445 aa9.41□□□□□ -0.9
SMAD4-206ENST00000588860 NOP14P78316 857 aaKnown RBP9.41□□□□□ -0.9
SMAD4-206ENST00000588860 IRF5Q13568 498 aa9.41□□□□□ -0.9
SMAD4-206ENST00000588860 NCOA4Q13772 614 aa9.41□□□□□ -0.9
SMAD4-206ENST00000588860 MFSD10Q14728 455 aa9.41□□□□□ -0.9
SMAD4-206ENST00000588860 MARCH8Q5T0T0 291 aa9.41□□□□□ -0.9
SMAD4-206ENST00000588860 MEI1Q5TIA1 1274 aa9.41□□□□□ -0.9
SMAD4-206ENST00000588860 CDR2LQ86X02 465 aaPredicted RBP9.41□□□□□ -0.9
SMAD4-206ENST00000588860 PALB2Q86YC2 1186 aa9.41□□□□□ -0.9
SMAD4-206ENST00000588860 GPR161Q8N6U8 529 aaKnown RBP9.41□□□□□ -0.9
SMAD4-206ENST00000588860 TPCN2Q8NHX9 752 aa9.41□□□□□ -0.9
SMAD4-206ENST00000588860 COG1Q8WTW3 980 aa9.41□□□□□ -0.9
SMAD4-206ENST00000588860 LMBR1Q8WVP7 490 aa9.41□□□□□ -0.9
SMAD4-206ENST00000588860 RFFLQ8WZ73 363 aa9.41□□□□□ -0.9
SMAD4-206ENST00000588860 TAF4BQ92750 862 aa9.41□□□□□ -0.9
SMAD4-206ENST00000588860 CPB2Q96IY4 423 aa9.41□□□□□ -0.9
SMAD4-206ENST00000588860 MMS19Q96T76 1030 aa9.41□□□□□ -0.9
SMAD4-206ENST00000588860 PSMB7Q99436 277 aa9.41□□□□□ -0.9
SMAD4-206ENST00000588860 ARID3AQ99856 593 aa9.41□□□□□ -0.9
SMAD4-206ENST00000588860 TLR10Q9BXR5 811 aa9.41□□□□□ -0.9
SMAD4-206ENST00000588860 MTMR12Q9C0I1 747 aa9.41□□□□□ -0.9
SMAD4-206ENST00000588860 FAM49AQ9H0Q0 323 aaPredicted RBP9.41□□□□□ -0.9
SMAD4-206ENST00000588860 EPC1Q9H2F5 836 aa9.41□□□□□ -0.9
SMAD4-206ENST00000588860 PDZD7Q9H5P4 517 aa9.41□□□□□ -0.9
SMAD4-206ENST00000588860 RPF1Q9H9Y2 349 aaKnown RBP9.41□□□□□ -0.9
SMAD4-206ENST00000588860 IFT122Q9HBG6 1241 aa9.41□□□□□ -0.9
SMAD4-206ENST00000588860 APOBEC3GQ9HC16 384 aaKnown RBP9.41□□□□□ -0.9
SMAD4-206ENST00000588860 PTPRHQ9HD43 1115 aa9.41□□□□□ -0.9
SMAD4-206ENST00000588860 SETD4Q9NVD3 440 aa9.41□□□□□ -0.9
SMAD4-206ENST00000588860 ARGLU1Q9NWB6 273 aaPredicted RBP9.41□□□□□ -0.9
SMAD4-206ENST00000588860 SCN10AQ9Y5Y9 1956 aa9.41□□□□□ -0.9
SMAD4-206ENST00000588860 TRIOBPQ9H2D6 2365 aa9.41□□□□□ -0.9
SMAD4-206ENST00000588860 UMODL1Q5DID0 1318 aa9.4□□□□□ -0.9
SMAD4-206ENST00000588860 SCN1AP35498 2009 aa9.4□□□□□ -0.9
SMAD4-206ENST00000588860 ANKRD62A6NC57 917 aa9.4□□□□□ -0.9
SMAD4-206ENST00000588860 A6NJR5 290 aa9.4□□□□□ -0.9
SMAD4-206ENST00000588860 PDE2AO00408 941 aaPredicted RBP9.4□□□□□ -0.9
SMAD4-206ENST00000588860 RTN2O75298 545 aa9.4□□□□□ -0.9
SMAD4-206ENST00000588860 CSDE1O75534 798 aaKnown RBP9.4□□□□□ -0.9
SMAD4-206ENST00000588860 ERLIN2O94905 339 aa9.4□□□□□ -0.9
SMAD4-206ENST00000588860 IL18RAPO95256 599 aa9.4□□□□□ -0.9
SMAD4-206ENST00000588860 CALCAP01258 141 aa9.4□□□□□ -0.9
SMAD4-206ENST00000588860 FTLP02792 175 aaPredicted RBP9.4□□□□□ -0.9
SMAD4-206ENST00000588860 MMEP08473 750 aa9.4□□□□□ -0.9
SMAD4-206ENST00000588860 CLTAP09496 248 aa9.4□□□□□ -0.9
SMAD4-206ENST00000588860 RHOXF2BP0C7M4 288 aa9.4□□□□□ -0.9
SMAD4-206ENST00000588860 IQCF3P0C7M6 154 aa9.4□□□□□ -0.9
SMAD4-206ENST00000588860 TMEM191BP0C7N4 346 aa9.4□□□□□ -0.9
SMAD4-206ENST00000588860 CXCL8P10145 99 aa9.4□□□□□ -0.9
SMAD4-206ENST00000588860 MCF2P10911 925 aa9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms