RNA–Protein interactions for RNA: ENST00000588738.5

ERCC1-207, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 2

Gene ERCC1, Length 586 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-207ENST00000588738 CBWD1Q9BRT8 395 aa20.43■□□□□ 0.86
ERCC1-207ENST00000588738 TTPALQ9BTX7 342 aa20.43■□□□□ 0.86
ERCC1-207ENST00000588738 PCIF1Q9H4Z3 704 aa20.43■□□□□ 0.86
ERCC1-207ENST00000588738 CLEC1BQ9P126 229 aa20.43■□□□□ 0.86
ERCC1-207ENST00000588738 DERAQ9Y315 318 aa20.43■□□□□ 0.86
ERCC1-207ENST00000588738 IL18RAPO95256 599 aa20.42■□□□□ 0.86
ERCC1-207ENST00000588738 SNRPFP62306 86 aaKnown RBP20.42■□□□□ 0.86
ERCC1-207ENST00000588738 RBM10P98175 930 aaKnown RBP20.42■□□□□ 0.86
ERCC1-207ENST00000588738 FAM160A1Q05DH4 1040 aa20.42■□□□□ 0.86
ERCC1-207ENST00000588738 JADE1Q6IE81 842 aa20.42■□□□□ 0.86
ERCC1-207ENST00000588738 CEP57Q86XR8 500 aa20.42■□□□□ 0.86
ERCC1-207ENST00000588738 NELFCDQ8IXH7 590 aa20.42■□□□□ 0.86
ERCC1-207ENST00000588738 C3orf58Q8NDZ4 430 aa20.42■□□□□ 0.86
ERCC1-207ENST00000588738 VN1R2Q8NFZ6 395 aa20.42■□□□□ 0.86
ERCC1-207ENST00000588738 RIN2Q8WYP3 895 aaPredicted RBP20.42■□□□□ 0.86
ERCC1-207ENST00000588738 CASP10Q92851 521 aa20.42■□□□□ 0.86
ERCC1-207ENST00000588738 SAAL1Q96ER3 474 aa20.42■□□□□ 0.86
ERCC1-207ENST00000588738 MSLNLQ96KJ4 702 aa20.42■□□□□ 0.86
ERCC1-207ENST00000588738 B3GALT6Q96L58 329 aa20.42■□□□□ 0.86
ERCC1-207ENST00000588738 RXFP1Q9HBX9 757 aa20.42■□□□□ 0.86
ERCC1-207ENST00000588738 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP20.42■□□□□ 0.86
ERCC1-207ENST00000588738 TUBGCP4Q9UGJ1 667 aa20.42■□□□□ 0.86
ERCC1-207ENST00000588738 CD207Q9UJ71 328 aa20.42■□□□□ 0.86
ERCC1-207ENST00000588738 BARX2Q9UMQ3 279 aaPredicted RBP20.42■□□□□ 0.86
ERCC1-207ENST00000588738 FAM50BQ9Y247 325 aa20.42■□□□□ 0.86
ERCC1-207ENST00000588738 HCFC2Q9Y5Z7 792 aa20.42■□□□□ 0.86
ERCC1-207ENST00000588738 TCF20Q9UGU0 1960 aaKnown RBP20.42■□□□□ 0.86
ERCC1-207ENST00000588738 SPTBN5Q9NRC6 3674 aaKnown RBP20.42■□□□□ 0.86
ERCC1-207ENST00000588738 EXTL3O43909 919 aa20.41■□□□□ 0.86
ERCC1-207ENST00000588738 ADH1AP07327 375 aa20.41■□□□□ 0.86
ERCC1-207ENST00000588738 PRR29P0C7W0 189 aa20.41■□□□□ 0.86
ERCC1-207ENST00000588738 CREMQ03060 361 aa20.41■□□□□ 0.86
ERCC1-207ENST00000588738 DPYDQ12882 1025 aa20.41■□□□□ 0.86
ERCC1-207ENST00000588738 STK4Q13043 487 aa20.41■□□□□ 0.86
ERCC1-207ENST00000588738 SNW1Q13573 536 aaKnown RBP20.41■□□□□ 0.86
ERCC1-207ENST00000588738 TMEM132DQ14C87 1099 aa20.41■□□□□ 0.86
ERCC1-207ENST00000588738 CLUL1Q15846 466 aa20.41■□□□□ 0.86
ERCC1-207ENST00000588738 BMT2Q1RMZ1 405 aa20.41■□□□□ 0.86
ERCC1-207ENST00000588738 PTCRAQ6ISU1 281 aaPredicted RBP20.41■□□□□ 0.86
ERCC1-207ENST00000588738 PDXDC1Q6P996 788 aa20.41■□□□□ 0.86
ERCC1-207ENST00000588738 CD300LGQ6UXG3 332 aa20.41■□□□□ 0.86
ERCC1-207ENST00000588738 PDZRN4Q6ZMN7 1036 aaPredicted RBP20.41■□□□□ 0.86
ERCC1-207ENST00000588738 HS2ST1Q7LGA3 356 aa20.41■□□□□ 0.86
ERCC1-207ENST00000588738 ENGASEQ8NFI3 743 aa20.41■□□□□ 0.86
ERCC1-207ENST00000588738 BEST2Q8NFU1 509 aa20.41■□□□□ 0.86
ERCC1-207ENST00000588738 NOC3LQ8WTT2 800 aaKnown RBP20.41■□□□□ 0.86
ERCC1-207ENST00000588738 CGNQ9P2M7 1197 aaKnown RBP20.41■□□□□ 0.86
ERCC1-207ENST00000588738 NUB1Q9Y5A7 615 aa20.41■□□□□ 0.86
ERCC1-207ENST00000588738 GOLGA8IPA6NC78 632 aa20.4■□□□□ 0.86
ERCC1-207ENST00000588738 GOLGA8JA6NMD2 632 aa20.4■□□□□ 0.86
ERCC1-207ENST00000588738 TGFB1I1O43294 461 aa20.4■□□□□ 0.86
ERCC1-207ENST00000588738 IGFBP6P24592 240 aaPredicted RBP20.4■□□□□ 0.86
ERCC1-207ENST00000588738 LRPAP1P30533 357 aa20.4■□□□□ 0.86
ERCC1-207ENST00000588738 KNOP1Q1ED39 458 aaKnown RBP20.4■□□□□ 0.86
ERCC1-207ENST00000588738 RTP2Q5QGT7 225 aa20.4■□□□□ 0.86
ERCC1-207ENST00000588738 SPATA1Q5VX52 437 aa20.4■□□□□ 0.86
ERCC1-207ENST00000588738 GPD1LQ8N335 351 aa20.4■□□□□ 0.86
ERCC1-207ENST00000588738 ZSWIM2Q8NEG5 633 aa20.4■□□□□ 0.86
ERCC1-207ENST00000588738 SLC22A17Q8WUG5 538 aa20.4■□□□□ 0.86
ERCC1-207ENST00000588738 KIAA1586Q9HCI6 787 aa20.4■□□□□ 0.86
ERCC1-207ENST00000588738 RBAKQ9NYW8 714 aaPredicted RBP20.4■□□□□ 0.86
ERCC1-207ENST00000588738 FNIP2Q9P278 1114 aa20.4■□□□□ 0.86
ERCC1-207ENST00000588738 C2CD2Q9Y426 696 aa20.4■□□□□ 0.86
ERCC1-207ENST00000588738 VWA8A3KMH1 1905 aa20.39■□□□□ 0.86
ERCC1-207ENST00000588738 GRXCR2A6NFK2 248 aa20.39■□□□□ 0.85
ERCC1-207ENST00000588738 TULP1O00294 542 aaPredicted RBP20.39■□□□□ 0.85
ERCC1-207ENST00000588738 TEX28O15482 410 aa20.39■□□□□ 0.85
ERCC1-207ENST00000588738 RHOBTB3O94955 611 aa20.39■□□□□ 0.85
ERCC1-207ENST00000588738 NFICP08651 508 aa20.39■□□□□ 0.85
ERCC1-207ENST00000588738 HOXB8P17481 243 aaPredicted RBP20.39■□□□□ 0.85
ERCC1-207ENST00000588738 FGFR3P22607 806 aa20.39■□□□□ 0.85
ERCC1-207ENST00000588738 BRCC3P46736 316 aa20.39■□□□□ 0.85
ERCC1-207ENST00000588738 CLCN4P51793 760 aa20.39■□□□□ 0.85
ERCC1-207ENST00000588738 ANKRD54Q6NXT1 300 aa20.39■□□□□ 0.85
ERCC1-207ENST00000588738 NT5DC4Q86YG4 428 aa20.39■□□□□ 0.85
ERCC1-207ENST00000588738 BRSK2Q8IWQ3 736 aa20.39■□□□□ 0.85
ERCC1-207ENST00000588738 KIAA0895Q8NCT3 520 aa20.39■□□□□ 0.85
ERCC1-207ENST00000588738 PIK3R5Q8WYR1 880 aa20.39■□□□□ 0.85
ERCC1-207ENST00000588738 TIGD1Q96MW7 591 aa20.39■□□□□ 0.85
ERCC1-207ENST00000588738 AGPAT3Q9NRZ7 376 aa20.39■□□□□ 0.85
ERCC1-207ENST00000588738 HSPBP1Q9NZL4 362 aa20.39■□□□□ 0.85
ERCC1-207ENST00000588738 HOOK1Q9UJC3 728 aaKnown RBP20.39■□□□□ 0.85
ERCC1-207ENST00000588738 VCANP13611 3396 aa20.38■□□□□ 0.85
ERCC1-207ENST00000588738 ZNF233A6NK53 670 aa20.38■□□□□ 0.85
ERCC1-207ENST00000588738 I3L4J1 428 aa20.38■□□□□ 0.85
ERCC1-207ENST00000588738 MBTPS2O43462 519 aa20.38■□□□□ 0.85
ERCC1-207ENST00000588738 KIF20AO95235 890 aa20.38■□□□□ 0.85
ERCC1-207ENST00000588738 EPCAMP16422 314 aa20.38■□□□□ 0.85
ERCC1-207ENST00000588738 MCM4P33991 863 aa20.38■□□□□ 0.85
ERCC1-207ENST00000588738 SMAD4Q13485 552 aaKnown RBP20.38■□□□□ 0.85
ERCC1-207ENST00000588738 KCNB1Q14721 858 aa20.38■□□□□ 0.85
ERCC1-207ENST00000588738 PSMD5Q16401 504 aa20.38■□□□□ 0.85
ERCC1-207ENST00000588738 PRSS55Q6UWB4 352 aaPredicted RBP20.38■□□□□ 0.85
ERCC1-207ENST00000588738 SMRP1Q8NCR6 262 aa20.38■□□□□ 0.85
ERCC1-207ENST00000588738 GOLGA5Q8TBA6 731 aa20.38■□□□□ 0.85
ERCC1-207ENST00000588738 LNX1Q8TBB1 728 aaPredicted RBP20.38■□□□□ 0.85
ERCC1-207ENST00000588738 ADAMTS19Q8TE59 1207 aa20.38■□□□□ 0.85
ERCC1-207ENST00000588738 DZANK1Q9NVP4 752 aa20.38■□□□□ 0.85
ERCC1-207ENST00000588738 DPP7Q9UHL4 492 aa20.38■□□□□ 0.85
ERCC1-207ENST00000588738 CLIC2O15247 247 aa20.37■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms