RNA–Protein interactions for RNA: ENST00000588210.1

CCDC43-203, Transcript of coiled-coil domain containing 43, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CCDC43, Length 2,067 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-203ENST00000588210 SH2D3AQ9BRG2 576 aa15.74■□□□□ 0.11
CCDC43-203ENST00000588210 FAM107BQ9H098 131 aa15.74■□□□□ 0.11
CCDC43-203ENST00000588210 FAM49AQ9H0Q0 323 aaPredicted RBP15.74■□□□□ 0.11
CCDC43-203ENST00000588210 SIX2Q9NPC8 291 aa15.74■□□□□ 0.11
CCDC43-203ENST00000588210 FAM153AQ9UHL3 310 aa15.74■□□□□ 0.11
CCDC43-203ENST00000588210 IGKV6-21A0A0C4DH24 114 aa15.74■□□□□ 0.11
CCDC43-203ENST00000588210 ESYT3A0FGR9 886 aa15.74■□□□□ 0.11
CCDC43-203ENST00000588210 GTPBP10A4D1E9 387 aaKnown RBP15.74■□□□□ 0.11
CCDC43-203ENST00000588210 RAD51CO43502 376 aa15.74■□□□□ 0.11
CCDC43-203ENST00000588210 AKAP3O75969 853 aa15.74■□□□□ 0.11
CCDC43-203ENST00000588210 RFC5P40937 340 aa15.74■□□□□ 0.11
CCDC43-203ENST00000588210 IER5Q5VY09 327 aa15.74■□□□□ 0.11
CCDC43-203ENST00000588210 TRAF7Q6Q0C0 670 aa15.74■□□□□ 0.11
CCDC43-203ENST00000588210 RPUSD2Q8IZ73 545 aaKnown RBP15.74■□□□□ 0.11
CCDC43-203ENST00000588210 KIAA0319LQ8IZA0 1049 aa15.74■□□□□ 0.11
CCDC43-203ENST00000588210 LINC01465Q8N7H1 131 aa15.74■□□□□ 0.11
CCDC43-203ENST00000588210 ACTRT1Q8TDG2 376 aa15.74■□□□□ 0.11
CCDC43-203ENST00000588210 PIGOQ8TEQ8 1089 aa15.74■□□□□ 0.11
CCDC43-203ENST00000588210 SLC7A3Q8WY07 619 aa15.74■□□□□ 0.11
CCDC43-203ENST00000588210 CALR3Q96L12 384 aaKnown RBP15.74■□□□□ 0.11
CCDC43-203ENST00000588210 DBR1Q9UK59 544 aaKnown RBP15.74■□□□□ 0.11
CCDC43-203ENST00000588210 TANC1Q9C0D5 1861 aa15.73■□□□□ 0.11
CCDC43-203ENST00000588210 A0A0A6YYK5 440 aaPredicted RBP15.73■□□□□ 0.11
CCDC43-203ENST00000588210 EYA4O95677 639 aa15.73■□□□□ 0.11
CCDC43-203ENST00000588210 PFKMP08237 780 aa15.73■□□□□ 0.11
CCDC43-203ENST00000588210 RARRES1P49788 294 aa15.73■□□□□ 0.11
CCDC43-203ENST00000588210 IFT81Q8WYA0 676 aa15.73■□□□□ 0.11
CCDC43-203ENST00000588210 PIK3R5Q8WYR1 880 aa15.73■□□□□ 0.11
CCDC43-203ENST00000588210 SLC35C1Q96A29 364 aa15.73■□□□□ 0.11
CCDC43-203ENST00000588210 DHX33Q9H6R0 707 aaKnown RBP15.73■□□□□ 0.11
CCDC43-203ENST00000588210 IL23AQ9NPF7 189 aa15.73■□□□□ 0.11
CCDC43-203ENST00000588210 OLFML3Q9NRN5 406 aa15.73■□□□□ 0.11
CCDC43-203ENST00000588210 INTUQ9ULD6 942 aa15.73■□□□□ 0.11
CCDC43-203ENST00000588210 ZNF233A6NK53 670 aa15.72■□□□□ 0.11
CCDC43-203ENST00000588210 BHMG1C9JSJ3 638 aaPredicted RBP15.72■□□□□ 0.11
CCDC43-203ENST00000588210 M0QZ92 97 aa15.72■□□□□ 0.11
CCDC43-203ENST00000588210 KCNK3O14649 394 aa15.72■□□□□ 0.11
CCDC43-203ENST00000588210 TBCAO75347 108 aaKnown RBP15.72■□□□□ 0.11
CCDC43-203ENST00000588210 GAP43P17677 238 aa15.72■□□□□ 0.11
CCDC43-203ENST00000588210 HSPA9P38646 679 aaKnown RBP15.72■□□□□ 0.11
CCDC43-203ENST00000588210 NFIL3Q16649 462 aa15.72■□□□□ 0.11
CCDC43-203ENST00000588210 DCAF17Q5H9S7 520 aaPredicted RBP15.72■□□□□ 0.11
CCDC43-203ENST00000588210 EMC10Q5UCC4 262 aa15.72■□□□□ 0.11
CCDC43-203ENST00000588210 ALKBH5Q6P6C2 394 aaKnown RBP15.72■□□□□ 0.11
CCDC43-203ENST00000588210 CHRDL2Q6WN34 429 aa15.72■□□□□ 0.11
CCDC43-203ENST00000588210 KDM7AQ6ZMT4 941 aa15.72■□□□□ 0.11
CCDC43-203ENST00000588210 VPS36Q86VN1 386 aa15.72■□□□□ 0.11
CCDC43-203ENST00000588210 EFCAB13Q8IY85 973 aa15.72■□□□□ 0.11
CCDC43-203ENST00000588210 TPCN2Q8NHX9 752 aa15.72■□□□□ 0.11
CCDC43-203ENST00000588210 RUSC1Q9BVN2 902 aa15.72■□□□□ 0.11
CCDC43-203ENST00000588210 UBE2OQ9C0C9 1292 aaKnown RBP15.72■□□□□ 0.11
CCDC43-203ENST00000588210 ISCUQ9H1K1 167 aa15.72■□□□□ 0.11
CCDC43-203ENST00000588210 EVPLQ92817 2033 aa15.72■□□□□ 0.11
CCDC43-203ENST00000588210 EIF3DO15371 548 aaKnown RBP eCLIP15.72■□□□□ 0.11
CCDC43-203ENST00000588210 GAS2O43903 313 aaKnown RBP15.72■□□□□ 0.11
CCDC43-203ENST00000588210 DGAT1O75907 488 aa15.72■□□□□ 0.11
CCDC43-203ENST00000588210 CTSHP09668 335 aa15.72■□□□□ 0.11
CCDC43-203ENST00000588210 POLGP54098 1239 aaPredicted RBP15.72■□□□□ 0.11
CCDC43-203ENST00000588210 MRPS6P82932 125 aaKnown RBP15.72■□□□□ 0.11
CCDC43-203ENST00000588210 MGAT3Q09327 533 aa15.72■□□□□ 0.11
CCDC43-203ENST00000588210 SLFN11Q7Z7L1 901 aa15.72■□□□□ 0.11
CCDC43-203ENST00000588210 LRRC71Q8N4P6 559 aa15.72■□□□□ 0.11
CCDC43-203ENST00000588210 PRO3102Q9H379 93 aa15.72■□□□□ 0.11
CCDC43-203ENST00000588210 GCNT4Q9P109 453 aa15.72■□□□□ 0.11
CCDC43-203ENST00000588210 AJAP1Q9UKB5 411 aaPredicted RBP15.72■□□□□ 0.11
CCDC43-203ENST00000588210 CEP290O15078 2479 aa15.72■□□□□ 0.11
CCDC43-203ENST00000588210 ZMYM2Q9UBW7 1377 aa15.71■□□□□ 0.11
CCDC43-203ENST00000588210 GFPT2O94808 682 aa15.71■□□□□ 0.11
CCDC43-203ENST00000588210 KRT14P02533 472 aa15.71■□□□□ 0.11
CCDC43-203ENST00000588210 CHRNA1P02708 482 aa15.71■□□□□ 0.11
CCDC43-203ENST00000588210 FERP16591 822 aa15.71■□□□□ 0.11
CCDC43-203ENST00000588210 CCT5P48643 541 aa15.71■□□□□ 0.11
CCDC43-203ENST00000588210 CLCN3P51790 818 aa15.71■□□□□ 0.11
CCDC43-203ENST00000588210 CDC42EP1Q00587 391 aa15.71■□□□□ 0.11
CCDC43-203ENST00000588210 CUL1Q13616 776 aa15.71■□□□□ 0.11
CCDC43-203ENST00000588210 BCAS4Q8TDM0 211 aa15.71■□□□□ 0.11
CCDC43-203ENST00000588210 BORCS6Q96GS4 357 aa15.71■□□□□ 0.11
CCDC43-203ENST00000588210 BHMT2Q9H2M3 363 aa15.71■□□□□ 0.11
CCDC43-203ENST00000588210 TRPV2Q9Y5S1 764 aa15.71■□□□□ 0.11
CCDC43-203ENST00000588210 CDY2AQ9Y6F7 541 aa15.71■□□□□ 0.11
CCDC43-203ENST00000588210 PGRMC1O00264 195 aaKnown RBP15.71■□□□□ 0.1
CCDC43-203ENST00000588210 EBAG9O00559 213 aa15.71■□□□□ 0.1
CCDC43-203ENST00000588210 NBNO60934 754 aa15.71■□□□□ 0.1
CCDC43-203ENST00000588210 GCNT3O95395 438 aa15.71■□□□□ 0.1
CCDC43-203ENST00000588210 CXCL10P02778 98 aa15.71■□□□□ 0.1
CCDC43-203ENST00000588210 H2AFZP0C0S5 128 aa15.71■□□□□ 0.1
CCDC43-203ENST00000588210 NOP2P46087 812 aaKnown RBP15.71■□□□□ 0.1
CCDC43-203ENST00000588210 CASP4P49662 377 aa15.71■□□□□ 0.1
CCDC43-203ENST00000588210 GUCY2FP51841 1108 aa15.71■□□□□ 0.1
CCDC43-203ENST00000588210 MBTPS1Q14703 1052 aa15.71■□□□□ 0.1
CCDC43-203ENST00000588210 GPNMBQ14956 572 aa15.71■□□□□ 0.1
CCDC43-203ENST00000588210 PSRC1Q6PGN9 363 aaPredicted RBP15.71■□□□□ 0.1
CCDC43-203ENST00000588210 H2AFVQ71UI9 128 aa15.71■□□□□ 0.1
CCDC43-203ENST00000588210 DEFB128Q7Z7B8 93 aa15.71■□□□□ 0.1
CCDC43-203ENST00000588210 PPM1EQ8WY54 764 aa15.71■□□□□ 0.1
CCDC43-203ENST00000588210 CELF4Q9BZC1 486 aaKnown RBP15.71■□□□□ 0.1
CCDC43-203ENST00000588210 AKT3Q9Y243 479 aa15.71■□□□□ 0.1
CCDC43-203ENST00000588210 STXBP5LQ9Y2K9 1186 aa15.71■□□□□ 0.1
CCDC43-203ENST00000588210 SQORQ9Y6N5 450 aa15.71■□□□□ 0.1
CCDC43-203ENST00000588210 UBE4BO95155 1302 aa15.7■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms