RNA–Protein interactions for RNA: ENST00000587338.1

SDF2-204, Transcript of stromal cell derived factor 2, humanhuman

TSL 3

Gene SDF2, Length 583 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-204ENST00000587338 B3GAT3O94766 335 aa9.44□□□□□ -0.9
SDF2-204ENST00000587338 PSMC3P17980 439 aa9.44□□□□□ -0.9
SDF2-204ENST00000587338 GLRA2P23416 452 aa9.44□□□□□ -0.9
SDF2-204ENST00000587338 VIPR2P41587 438 aa9.44□□□□□ -0.9
SDF2-204ENST00000587338 CCR2P41597 374 aa9.44□□□□□ -0.9
SDF2-204ENST00000587338 NEK4P51957 841 aa9.44□□□□□ -0.9
SDF2-204ENST00000587338 LIMK1P53667 647 aa9.44□□□□□ -0.9
SDF2-204ENST00000587338 ARPP19P56211 112 aa9.44□□□□□ -0.9
SDF2-204ENST00000587338 PTGDRQ13258 359 aa9.44□□□□□ -0.9
SDF2-204ENST00000587338 LRRC32Q14392 662 aa9.44□□□□□ -0.9
SDF2-204ENST00000587338 PRSS36Q5K4E3 855 aa9.44□□□□□ -0.9
SDF2-204ENST00000587338 ANKS3Q6ZW76 656 aa9.44□□□□□ -0.9
SDF2-204ENST00000587338 KRT25Q7Z3Z0 450 aa9.44□□□□□ -0.9
SDF2-204ENST00000587338 DEPDC1BQ8WUY9 529 aa9.44□□□□□ -0.9
SDF2-204ENST00000587338 SMARCD2Q92925 531 aa9.44□□□□□ -0.9
SDF2-204ENST00000587338 DDX27Q96GQ7 796 aaKnown RBP9.44□□□□□ -0.9
SDF2-204ENST00000587338 IPO9Q96P70 1041 aaKnown RBP9.44□□□□□ -0.9
SDF2-204ENST00000587338 NFKBIZQ9BYH8 718 aa9.44□□□□□ -0.9
SDF2-204ENST00000587338 POLR3FQ9H1D9 316 aaPredicted RBP9.44□□□□□ -0.9
SDF2-204ENST00000587338 ARRDC1-AS1Q9H2J1 176 aa9.44□□□□□ -0.9
SDF2-204ENST00000587338 SLITRK6Q9H5Y7 841 aa9.44□□□□□ -0.9
SDF2-204ENST00000587338 RXFP3Q9NSD7 469 aa9.44□□□□□ -0.9
SDF2-204ENST00000587338 ZMIZ1Q9ULJ6 1067 aa9.44□□□□□ -0.9
SDF2-204ENST00000587338 BACE2Q9Y5Z0 518 aa9.44□□□□□ -0.9
SDF2-204ENST00000587338 COL4A2P08572 1712 aa9.44□□□□□ -0.9
SDF2-204ENST00000587338 CCDC194A0A1B0GVG4 234 aa9.43□□□□□ -0.9
SDF2-204ENST00000587338 ARHGEF37A1IGU5 675 aa9.43□□□□□ -0.9
SDF2-204ENST00000587338 SLC38A8A6NNN8 435 aa9.43□□□□□ -0.9
SDF2-204ENST00000587338 C1QTNF9BB2RNN3 333 aa9.43□□□□□ -0.9
SDF2-204ENST00000587338 CCNT1O60563 726 aaKnown RBP9.43□□□□□ -0.9
SDF2-204ENST00000587338 USO1O60763 962 aaKnown RBP9.43□□□□□ -0.9
SDF2-204ENST00000587338 DGAT1O75907 488 aa9.43□□□□□ -0.9
SDF2-204ENST00000587338 PRKCBP05771 671 aa9.43□□□□□ -0.9
SDF2-204ENST00000587338 C1QTNF9P0C862 333 aa9.43□□□□□ -0.9
SDF2-204ENST00000587338 GCFC2P16383 781 aaKnown RBP9.43□□□□□ -0.9
SDF2-204ENST00000587338 LIG1P18858 919 aa9.43□□□□□ -0.9
SDF2-204ENST00000587338 IGFBP6P24592 240 aaPredicted RBP9.43□□□□□ -0.9
SDF2-204ENST00000587338 PSMA5P28066 241 aa9.43□□□□□ -0.9
SDF2-204ENST00000587338 HOXC13P31276 330 aa9.43□□□□□ -0.9
SDF2-204ENST00000587338 ARL2P36404 184 aa9.43□□□□□ -0.9
SDF2-204ENST00000587338 SOX9P48436 509 aa9.43□□□□□ -0.9
SDF2-204ENST00000587338 KPNA1P52294 538 aaPredicted RBP9.43□□□□□ -0.9
SDF2-204ENST00000587338 ROR1Q01973 937 aa9.43□□□□□ -0.9
SDF2-204ENST00000587338 SSRP1Q08945 709 aaKnown RBP9.43□□□□□ -0.9
SDF2-204ENST00000587338 SPIRE1Q08AE8 756 aa9.43□□□□□ -0.9
SDF2-204ENST00000587338 NAB2Q15742 525 aa9.43□□□□□ -0.9
SDF2-204ENST00000587338 NPY5RQ15761 445 aa9.43□□□□□ -0.9
SDF2-204ENST00000587338 GLRA4Q5JXX5 417 aa9.43□□□□□ -0.9
SDF2-204ENST00000587338 CYP4A22Q5TCH4 519 aa9.43□□□□□ -0.9
SDF2-204ENST00000587338 STPG1Q5TH74 334 aa9.43□□□□□ -0.9
SDF2-204ENST00000587338 PPP4R3AQ6IN85 833 aa9.43□□□□□ -0.9
SDF2-204ENST00000587338 PSAPL1Q6NUJ1 521 aa9.43□□□□□ -0.9
SDF2-204ENST00000587338 BLOC1S2Q6QNY1 142 aa9.43□□□□□ -0.9
SDF2-204ENST00000587338 UNQ6494/PRO21346Q6UXR6 183 aa9.43□□□□□ -0.9
SDF2-204ENST00000587338 MAEAQ7L5Y9 396 aa9.43□□□□□ -0.9
SDF2-204ENST00000587338 NEK8Q86SG6 692 aa9.43□□□□□ -0.9
SDF2-204ENST00000587338 NOSTRINQ8IVI9 506 aa9.43□□□□□ -0.9
SDF2-204ENST00000587338 DAGLBQ8NCG7 672 aa9.43□□□□□ -0.9
SDF2-204ENST00000587338 ZNF461Q8TAF7 563 aa9.43□□□□□ -0.9
SDF2-204ENST00000587338 ZSCAN18Q8TBC5 510 aaPredicted RBP9.43□□□□□ -0.9
SDF2-204ENST00000587338 CSGALNACT1Q8TDX6 532 aa9.43□□□□□ -0.9
SDF2-204ENST00000587338 HAS1Q92839 578 aa9.43□□□□□ -0.9
SDF2-204ENST00000587338 PRIMPOLQ96LW4 560 aa9.43□□□□□ -0.9
SDF2-204ENST00000587338 ZSWIM3Q96MP5 696 aa9.43□□□□□ -0.9
SDF2-204ENST00000587338 AIFM3Q96NN9 605 aa9.43□□□□□ -0.9
SDF2-204ENST00000587338 PDZD7Q9H5P4 517 aa9.43□□□□□ -0.9
SDF2-204ENST00000587338 CYP4F11Q9HBI6 524 aa9.43□□□□□ -0.9
SDF2-204ENST00000587338 TRPV5Q9NQA5 729 aa9.43□□□□□ -0.9
SDF2-204ENST00000587338 PRMT7Q9NVM4 692 aaPredicted RBP9.43□□□□□ -0.9
SDF2-204ENST00000587338 C2orf42Q9NWW7 574 aa9.43□□□□□ -0.9
SDF2-204ENST00000587338 GDAQ9Y2T3 454 aa9.43□□□□□ -0.9
SDF2-204ENST00000587338 INSL5Q9Y5Q6 135 aa9.43□□□□□ -0.9
SDF2-204ENST00000587338 CYP46A1Q9Y6A2 500 aa9.43□□□□□ -0.9
SDF2-204ENST00000587338 GCN1Q92616 2671 aaKnown RBP9.42□□□□□ -0.9
SDF2-204ENST00000587338 SPAG17Q6Q759 2223 aa9.42□□□□□ -0.9
SDF2-204ENST00000587338 NCANO14594 1321 aa9.42□□□□□ -0.9
SDF2-204ENST00000587338 TTLL13PA6NNM8 815 aa9.42□□□□□ -0.9
SDF2-204ENST00000587338 HEPACAM2A8MVW5 462 aa9.42□□□□□ -0.9
SDF2-204ENST00000587338 TMEM189-UBE2V1I3L0A0 370 aa9.42□□□□□ -0.9
SDF2-204ENST00000587338 CPLX1O14810 134 aa9.42□□□□□ -0.9
SDF2-204ENST00000587338 TM4SF5O14894 197 aa9.42□□□□□ -0.9
SDF2-204ENST00000587338 N4BP3O15049 544 aa9.42□□□□□ -0.9
SDF2-204ENST00000587338 TRAPPC3O43617 180 aa9.42□□□□□ -0.9
SDF2-204ENST00000587338 MICAL2O94851 1124 aa9.42□□□□□ -0.9
SDF2-204ENST00000587338 KCNK5O95279 499 aa9.42□□□□□ -0.9
SDF2-204ENST00000587338 PAPSS2O95340 614 aaPredicted RBP9.42□□□□□ -0.9
SDF2-204ENST00000587338 DEXIO95424 95 aa9.42□□□□□ -0.9
SDF2-204ENST00000587338 SEC24AO95486 1093 aa9.42□□□□□ -0.9
SDF2-204ENST00000587338 ZNF806P0C7X5 589 aa9.42□□□□□ -0.9
SDF2-204ENST00000587338 MYL4P12829 197 aa9.42□□□□□ -0.9
SDF2-204ENST00000587338 GJA1P17302 382 aa9.42□□□□□ -0.9
SDF2-204ENST00000587338 PDIA3P30101 505 aaKnown RBP9.42□□□□□ -0.9
SDF2-204ENST00000587338 BRCC3P46736 316 aa9.42□□□□□ -0.9
SDF2-204ENST00000587338 CLCNKBP51801 687 aa9.42□□□□□ -0.9
SDF2-204ENST00000587338 PRPF4BQ13523 1007 aaKnown RBP9.42□□□□□ -0.9
SDF2-204ENST00000587338 IQCEQ6IPM2 695 aa9.42□□□□□ -0.9
SDF2-204ENST00000587338 GALNT17Q6IS24 598 aa9.42□□□□□ -0.9
SDF2-204ENST00000587338 WDR5BQ86VZ2 330 aa9.42□□□□□ -0.9
SDF2-204ENST00000587338 ZBTB8OSQ8IWT0 167 aa9.42□□□□□ -0.9
SDF2-204ENST00000587338 YAF2Q8IY57 180 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms