RNA–Protein interactions for RNA: ENST00000587197.1

DNMT1-212, Transcript of DNA methyltransferase 1, humanhuman

TSL 2

Gene DNMT1, Length 809 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-212ENST00000587197 ZCWPW2Q504Y3 356 aa18.75■□□□□ 0.59
DNMT1-212ENST00000587197 CENPPQ6IPU0 288 aa18.75■□□□□ 0.59
DNMT1-212ENST00000587197 FOXR2Q6PJQ5 311 aa18.75■□□□□ 0.59
DNMT1-212ENST00000587197 RBM43Q6ZSC3 357 aaKnown RBP18.75■□□□□ 0.59
DNMT1-212ENST00000587197 BRSK2Q8IWQ3 736 aa18.75■□□□□ 0.59
DNMT1-212ENST00000587197 SMYD4Q8IYR2 804 aaPredicted RBP18.75■□□□□ 0.59
DNMT1-212ENST00000587197 GJD3Q8N144 294 aa18.75■□□□□ 0.59
DNMT1-212ENST00000587197 SAAL1Q96ER3 474 aa18.75■□□□□ 0.59
DNMT1-212ENST00000587197 ZMAT2Q96NC0 199 aaKnown RBP18.75■□□□□ 0.59
DNMT1-212ENST00000587197 MAPK8IP1Q9UQF2 711 aa18.75■□□□□ 0.59
DNMT1-212ENST00000587197 C2CD2Q9Y426 696 aa18.75■□□□□ 0.59
DNMT1-212ENST00000587197 ZNF233A6NK53 670 aa18.74■□□□□ 0.59
DNMT1-212ENST00000587197 NT5C1B-RDH14C9J2C7 533 aa18.74■□□□□ 0.59
DNMT1-212ENST00000587197 PER2O15055 1255 aa18.74■□□□□ 0.59
DNMT1-212ENST00000587197 MBTPS2O43462 519 aa18.74■□□□□ 0.59
DNMT1-212ENST00000587197 XPOTO43592 962 aaKnown RBP18.74■□□□□ 0.59
DNMT1-212ENST00000587197 CYP3A5P20815 502 aa18.74■□□□□ 0.59
DNMT1-212ENST00000587197 SLC11A1P49279 550 aa18.74■□□□□ 0.59
DNMT1-212ENST00000587197 CLUL1Q15846 466 aa18.74■□□□□ 0.59
DNMT1-212ENST00000587197 DUSP6Q16828 381 aa18.74■□□□□ 0.59
DNMT1-212ENST00000587197 EDRF1Q3B7T1 1238 aa18.74■□□□□ 0.59
DNMT1-212ENST00000587197 NT5DC4Q86YG4 428 aa18.74■□□□□ 0.59
DNMT1-212ENST00000587197 ZSWIM2Q8NEG5 633 aa18.74■□□□□ 0.59
DNMT1-212ENST00000587197 DHTKD1Q96HY7 919 aaPredicted RBP18.74■□□□□ 0.59
DNMT1-212ENST00000587197 UROC1Q96N76 676 aa18.74■□□□□ 0.59
DNMT1-212ENST00000587197 POP1Q99575 1024 aaKnown RBP18.74■□□□□ 0.59
DNMT1-212ENST00000587197 C1QTNF1Q9BXJ1 281 aa18.74■□□□□ 0.59
DNMT1-212ENST00000587197 DNAJB4Q9UDY4 337 aa18.74■□□□□ 0.59
DNMT1-212ENST00000587197 FAN1Q9Y2M0 1017 aa18.74■□□□□ 0.59
DNMT1-212ENST00000587197 PCDHGC5Q9Y5F6 944 aa18.74■□□□□ 0.59
DNMT1-212ENST00000587197 GOLGA8IPA6NC78 632 aa18.73■□□□□ 0.59
DNMT1-212ENST00000587197 GOLGA8JA6NMD2 632 aa18.73■□□□□ 0.59
DNMT1-212ENST00000587197 PSMA7O14818 248 aa18.73■□□□□ 0.59
DNMT1-212ENST00000587197 NR3C1P04150 777 aa18.73■□□□□ 0.59
DNMT1-212ENST00000587197 RPL13P26373 211 aaKnown RBP18.73■□□□□ 0.59
DNMT1-212ENST00000587197 CA8P35219 290 aa18.73■□□□□ 0.59
DNMT1-212ENST00000587197 SURF1Q15526 300 aa18.73■□□□□ 0.59
DNMT1-212ENST00000587197 SMAD2Q15796 467 aaKnown RBP18.73■□□□□ 0.59
DNMT1-212ENST00000587197 GLRA4Q5JXX5 417 aa18.73■□□□□ 0.59
DNMT1-212ENST00000587197 DDX53Q86TM3 631 aaKnown RBP18.73■□□□□ 0.59
DNMT1-212ENST00000587197 DDX27Q96GQ7 796 aaKnown RBP18.73■□□□□ 0.59
DNMT1-212ENST00000587197 IGSF21Q96ID5 467 aa18.73■□□□□ 0.59
DNMT1-212ENST00000587197 MSLNLQ96KJ4 702 aa18.73■□□□□ 0.59
DNMT1-212ENST00000587197 COLEC11Q9BWP8 271 aa18.73■□□□□ 0.59
DNMT1-212ENST00000587197 RBAKQ9NYW8 714 aaPredicted RBP18.73■□□□□ 0.59
DNMT1-212ENST00000587197 UBQLN1Q9UMX0 589 aaKnown RBP18.73■□□□□ 0.59
DNMT1-212ENST00000587197 PPP1R3GB7ZBB8 358 aa18.72■□□□□ 0.59
DNMT1-212ENST00000587197 BIN1O00499 593 aa18.72■□□□□ 0.59
DNMT1-212ENST00000587197 NRP1O14786 923 aa18.72■□□□□ 0.59
DNMT1-212ENST00000587197 MAPK13O15264 365 aa18.72■□□□□ 0.59
DNMT1-212ENST00000587197 EXOC3O60645 756 aa18.72■□□□□ 0.59
DNMT1-212ENST00000587197 CCNE1P24864 410 aa18.72■□□□□ 0.59
DNMT1-212ENST00000587197 RPL9P32969 192 aaKnown RBP18.72■□□□□ 0.59
DNMT1-212ENST00000587197 CYP2J2P51589 502 aa18.72■□□□□ 0.59
DNMT1-212ENST00000587197 LRRC63Q05C16 580 aa18.72■□□□□ 0.59
DNMT1-212ENST00000587197 SNRNP35Q16560 246 aaKnown RBP18.72■□□□□ 0.59
DNMT1-212ENST00000587197 ISM2Q6H9L7 571 aa18.72■□□□□ 0.59
DNMT1-212ENST00000587197 CBWD2Q8IUF1 395 aa18.72■□□□□ 0.59
DNMT1-212ENST00000587197 ADHFE1Q8IWW8 467 aa18.72■□□□□ 0.59
DNMT1-212ENST00000587197 VPS52Q8N1B4 723 aa18.72■□□□□ 0.59
DNMT1-212ENST00000587197 MRPL43Q8N983 215 aaKnown RBP18.72■□□□□ 0.59
DNMT1-212ENST00000587197 KIF12Q96FN5 646 aa18.72■□□□□ 0.59
DNMT1-212ENST00000587197 CLEC1BQ9P126 229 aa18.72■□□□□ 0.59
DNMT1-212ENST00000587197 REV3LO60673 3130 aa18.71■□□□□ 0.59
DNMT1-212ENST00000587197 TMEM189-UBE2V1I3L0A0 370 aa18.71■□□□□ 0.59
DNMT1-212ENST00000587197 CXCL14O95715 111 aa18.71■□□□□ 0.59
DNMT1-212ENST00000587197 CD44P16070 742 aaKnown RBP18.71■□□□□ 0.59
DNMT1-212ENST00000587197 LRPAP1P30533 357 aa18.71■□□□□ 0.59
DNMT1-212ENST00000587197 OR1G1P47890 313 aa18.71■□□□□ 0.59
DNMT1-212ENST00000587197 SOX4Q06945 474 aaPredicted RBP18.71■□□□□ 0.59
DNMT1-212ENST00000587197 TMEM132DQ14C87 1099 aa18.71■□□□□ 0.59
DNMT1-212ENST00000587197 CCDC183Q5T5S1 534 aa18.71■□□□□ 0.59
DNMT1-212ENST00000587197 SPATA1Q5VX52 437 aa18.71■□□□□ 0.59
DNMT1-212ENST00000587197 JADE1Q6IE81 842 aa18.71■□□□□ 0.59
DNMT1-212ENST00000587197 DCLRE1AQ6PJP8 1040 aa18.71■□□□□ 0.59
DNMT1-212ENST00000587197 TMEM184AQ6ZMB5 413 aa18.71■□□□□ 0.59
DNMT1-212ENST00000587197 ZC3H3Q8IXZ2 948 aaKnown RBP18.71■□□□□ 0.59
DNMT1-212ENST00000587197 MLKLQ8NB16 471 aa18.71■□□□□ 0.59
DNMT1-212ENST00000587197 FAM212AQ96EL1 285 aa18.71■□□□□ 0.59
DNMT1-212ENST00000587197 MFSD14AQ96MC6 490 aa18.71■□□□□ 0.59
DNMT1-212ENST00000587197 TSG101Q99816 390 aa18.71■□□□□ 0.59
DNMT1-212ENST00000587197 MARCH5Q9NX47 278 aa18.71■□□□□ 0.59
DNMT1-212ENST00000587197 BARX2Q9UMQ3 279 aaPredicted RBP18.71■□□□□ 0.59
DNMT1-212ENST00000587197 VCANP13611 3396 aa18.71■□□□□ 0.59
DNMT1-212ENST00000587197 CITO14578 2027 aa18.71■□□□□ 0.59
DNMT1-212ENST00000587197 NCOR1O75376 2440 aa18.7■□□□□ 0.58
DNMT1-212ENST00000587197 C2orf71A6NGG8 1288 aa18.7■□□□□ 0.58
DNMT1-212ENST00000587197 CASTOR2A6NHX0 329 aa18.7■□□□□ 0.58
DNMT1-212ENST00000587197 HIDE1A8MVS5 230 aa18.7■□□□□ 0.58
DNMT1-212ENST00000587197 GLP2RO95838 553 aa18.7■□□□□ 0.58
DNMT1-212ENST00000587197 EFEMP2O95967 443 aa18.7■□□□□ 0.58
DNMT1-212ENST00000587197 CTSAP10619 480 aa18.7■□□□□ 0.58
DNMT1-212ENST00000587197 NR2F2P24468 414 aa18.7■□□□□ 0.58
DNMT1-212ENST00000587197 ENPEPQ07075 957 aa18.7■□□□□ 0.58
DNMT1-212ENST00000587197 CYP24A1Q07973 514 aa18.7■□□□□ 0.58
DNMT1-212ENST00000587197 UPP1Q16831 310 aa18.7■□□□□ 0.58
DNMT1-212ENST00000587197 KLHL40Q2TBA0 621 aa18.7■□□□□ 0.58
DNMT1-212ENST00000587197 TMEM173Q86WV6 379 aaPredicted RBP18.7■□□□□ 0.58
DNMT1-212ENST00000587197 SMRP1Q8NCR6 262 aa18.7■□□□□ 0.58
DNMT1-212ENST00000587197 BEST2Q8NFU1 509 aa18.7■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms