RNA–Protein interactions for RNA: ENST00000585953.5

RPRD1A-204, Transcript of regulation of nuclear pre-mRNA domain containing 1A, humanhuman

TSL 3

Gene RPRD1A, Length 2,357 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1A-204ENST00000585953 SMARCA4P51532 1647 aa3.19□□□□□ -1.9
RPRD1A-204ENST00000585953 ALDH2P05091 517 aa3.18□□□□□ -1.9
RPRD1A-204ENST00000585953 CD1AP06126 327 aa3.18□□□□□ -1.9
RPRD1A-204ENST00000585953 MALP21145 153 aa3.18□□□□□ -1.9
RPRD1A-204ENST00000585953 HK3P52790 923 aa3.18□□□□□ -1.9
RPRD1A-204ENST00000585953 HMGA2P52926 109 aa3.18□□□□□ -1.9
RPRD1A-204ENST00000585953 CREMQ03060 361 aa3.18□□□□□ -1.9
RPRD1A-204ENST00000585953 CNGB1Q14028 1251 aaPredicted RBP3.18□□□□□ -1.9
RPRD1A-204ENST00000585953 MINDY4Q4G0A6 757 aa3.18□□□□□ -1.9
RPRD1A-204ENST00000585953 SPDYAQ5MJ70 313 aa3.18□□□□□ -1.9
RPRD1A-204ENST00000585953 UBE3BQ7Z3V4 1068 aa3.18□□□□□ -1.9
RPRD1A-204ENST00000585953 C14orf80Q86SX3 495 aa3.18□□□□□ -1.9
RPRD1A-204ENST00000585953 ACO2Q99798 780 aaKnown RBP3.18□□□□□ -1.9
RPRD1A-204ENST00000585953 NDC1Q9BTX1 674 aa3.18□□□□□ -1.9
RPRD1A-204ENST00000585953 KMT5AQ9NQR1 393 aa3.18□□□□□ -1.9
RPRD1A-204ENST00000585953 FBXO34Q9NWN3 711 aa3.18□□□□□ -1.9
RPRD1A-204ENST00000585953 FAM30AQ9NZY2 134 aa3.18□□□□□ -1.9
RPRD1A-204ENST00000585953 POLHQ9Y253 713 aa3.18□□□□□ -1.9
RPRD1A-204ENST00000585953 CHD1O14646 1710 aa3.18□□□□□ -1.9
RPRD1A-204ENST00000585953 TCRBV7S2A1N4TA0A589 114 aa3.18□□□□□ -1.9
RPRD1A-204ENST00000585953 GRXCR1A8MXD5 290 aa3.18□□□□□ -1.9
RPRD1A-204ENST00000585953 NT5C1B-RDH14C9J2C7 533 aa3.18□□□□□ -1.9
RPRD1A-204ENST00000585953 H3BML4 177 aa3.18□□□□□ -1.9
RPRD1A-204ENST00000585953 GRM6O15303 877 aa3.18□□□□□ -1.9
RPRD1A-204ENST00000585953 AMHP03971 560 aa3.18□□□□□ -1.9
RPRD1A-204ENST00000585953 SBK3P0C264 359 aa3.18□□□□□ -1.9
RPRD1A-204ENST00000585953 MGAT1P26572 445 aa3.18□□□□□ -1.9
RPRD1A-204ENST00000585953 SNAPC2Q13487 334 aa3.18□□□□□ -1.9
RPRD1A-204ENST00000585953 ATP2B3Q16720 1220 aa3.18□□□□□ -1.9
RPRD1A-204ENST00000585953 SLC4A10Q6U841 1118 aa3.18□□□□□ -1.9
RPRD1A-204ENST00000585953 DENND1CQ8IV53 801 aa3.18□□□□□ -1.9
RPRD1A-204ENST00000585953 CAMKK1Q8N5S9 505 aa3.18□□□□□ -1.9
RPRD1A-204ENST00000585953 ZBTB34Q8NCN2 500 aa3.18□□□□□ -1.9
RPRD1A-204ENST00000585953 TTC8Q8TAM2 541 aa3.18□□□□□ -1.9
RPRD1A-204ENST00000585953 PPP1R35Q8TAP8 253 aa3.18□□□□□ -1.9
RPRD1A-204ENST00000585953 MAN1C1Q9NR34 630 aa3.18□□□□□ -1.9
RPRD1A-204ENST00000585953 POGKQ9P215 609 aa3.18□□□□□ -1.9
RPRD1A-204ENST00000585953 PCDHA3Q9Y5H8 950 aa3.18□□□□□ -1.9
RPRD1A-204ENST00000585953 XDHP47989 1333 aa3.18□□□□□ -1.9
RPRD1A-204ENST00000585953 GOLGA6CA6NDK9 693 aa3.17□□□□□ -1.9
RPRD1A-204ENST00000585953 GOLGA6BA6NDN3 693 aa3.17□□□□□ -1.9
RPRD1A-204ENST00000585953 DRGXA6NNA5 263 aa3.17□□□□□ -1.9
RPRD1A-204ENST00000585953 LEFTY2O00292 366 aa3.17□□□□□ -1.9
RPRD1A-204ENST00000585953 ERC2O15083 957 aa3.17□□□□□ -1.9
RPRD1A-204ENST00000585953 KIAA0391O15091 583 aaKnown RBP3.17□□□□□ -1.9
RPRD1A-204ENST00000585953 MARCH6O60337 910 aa3.17□□□□□ -1.9
RPRD1A-204ENST00000585953 ARIH2O95376 493 aa3.17□□□□□ -1.9
RPRD1A-204ENST00000585953 POMCP01189 267 aa3.17□□□□□ -1.9
RPRD1A-204ENST00000585953 GOLGA6DP0CG33 693 aa3.17□□□□□ -1.9
RPRD1A-204ENST00000585953 ATF3P18847 181 aa3.17□□□□□ -1.9
RPRD1A-204ENST00000585953 SLC6A4P31645 630 aa3.17□□□□□ -1.9
RPRD1A-204ENST00000585953 APOBEC3AP31941 199 aaPredicted RBP3.17□□□□□ -1.9
RPRD1A-204ENST00000585953 IL12RB1P42701 662 aa3.17□□□□□ -1.9
RPRD1A-204ENST00000585953 CHN2P52757 468 aa3.17□□□□□ -1.9
RPRD1A-204ENST00000585953 UBXN2BQ14CS0 331 aa3.17□□□□□ -1.9
RPRD1A-204ENST00000585953 PABPC1LQ4VXU2 614 aaKnown RBP3.17□□□□□ -1.9
RPRD1A-204ENST00000585953 HEATR3Q7Z4Q2 680 aa3.17□□□□□ -1.9
RPRD1A-204ENST00000585953 TMPRSS6Q8IU80 811 aa3.17□□□□□ -1.9
RPRD1A-204ENST00000585953 IL17DQ8TAD2 202 aa3.17□□□□□ -1.9
RPRD1A-204ENST00000585953 CGRRF1Q99675 332 aa3.17□□□□□ -1.9
RPRD1A-204ENST00000585953 AURKAIP1Q9NWT8 199 aaPredicted RBP3.17□□□□□ -1.9
RPRD1A-204ENST00000585953 GOLGA6AQ9NYA3 693 aa3.17□□□□□ -1.9
RPRD1A-204ENST00000585953 GABBR1Q9UBS5 961 aa3.17□□□□□ -1.9
RPRD1A-204ENST00000585953 STXBP5LQ9Y2K9 1186 aa3.17□□□□□ -1.9
RPRD1A-204ENST00000585953 NR2E3Q9Y5X4 410 aa3.17□□□□□ -1.9
RPRD1A-204ENST00000585953 MAPKBP1O60336 1514 aa3.17□□□□□ -1.9
RPRD1A-204ENST00000585953 LRP5O75197 1615 aa3.17□□□□□ -1.9
RPRD1A-204ENST00000585953 VSTM5A8MXK1 200 aa3.17□□□□□ -1.9
RPRD1A-204ENST00000585953 F2RL2O00254 374 aa3.17□□□□□ -1.9
RPRD1A-204ENST00000585953 PLSCR1O15162 318 aa3.17□□□□□ -1.9
RPRD1A-204ENST00000585953 MATN3O15232 486 aa3.17□□□□□ -1.9
RPRD1A-204ENST00000585953 B3GALT2O43825 422 aa3.17□□□□□ -1.9
RPRD1A-204ENST00000585953 UBXN7O94888 489 aa3.17□□□□□ -1.9
RPRD1A-204ENST00000585953 MYBP10242 640 aa3.17□□□□□ -1.9
RPRD1A-204ENST00000585953 MTHFD1P11586 935 aaKnown RBP3.17□□□□□ -1.9
RPRD1A-204ENST00000585953 ALAS1P13196 640 aa3.17□□□□□ -1.9
RPRD1A-204ENST00000585953 SLC6A2P23975 617 aa3.17□□□□□ -1.9
RPRD1A-204ENST00000585953 PTTG1IPP53801 180 aa3.17□□□□□ -1.9
RPRD1A-204ENST00000585953 NHLH2Q02577 135 aa3.17□□□□□ -1.9
RPRD1A-204ENST00000585953 TOB2Q14106 344 aaPredicted RBP3.17□□□□□ -1.9
RPRD1A-204ENST00000585953 GFOD2Q3B7J2 385 aa3.17□□□□□ -1.9
RPRD1A-204ENST00000585953 USP39Q53GS9 565 aaKnown RBP3.17□□□□□ -1.9
RPRD1A-204ENST00000585953 METRNLQ641Q3 311 aa3.17□□□□□ -1.9
RPRD1A-204ENST00000585953 OVCH2Q7RTZ1 564 aa3.17□□□□□ -1.9
RPRD1A-204ENST00000585953 IL17RDQ8NFM7 739 aa3.17□□□□□ -1.9
RPRD1A-204ENST00000585953 EXTL1Q92935 676 aa3.17□□□□□ -1.9
RPRD1A-204ENST00000585953 FAM193BQ96PV7 902 aaPredicted RBP3.17□□□□□ -1.9
RPRD1A-204ENST00000585953 NEU1Q99519 415 aa3.17□□□□□ -1.9
RPRD1A-204ENST00000585953 LRFN3Q9BTN0 628 aa3.17□□□□□ -1.9
RPRD1A-204ENST00000585953 SLITRK6Q9H5Y7 841 aa3.17□□□□□ -1.9
RPRD1A-204ENST00000585953 LMBRD1Q9NUN5 540 aa3.17□□□□□ -1.9
RPRD1A-204ENST00000585953 ABCF2Q9UG63 623 aa3.17□□□□□ -1.9
RPRD1A-204ENST00000585953 ABCC10Q5T3U5 1492 aa3.16□□□□□ -1.9
RPRD1A-204ENST00000585953 C1QTNF3-AMACRE9PGA6 284 aa3.16□□□□□ -1.9
RPRD1A-204ENST00000585953 CTNND1O60716 968 aaKnown RBP3.16□□□□□ -1.9
RPRD1A-204ENST00000585953 HAUS5O94927 633 aa3.16□□□□□ -1.9
RPRD1A-204ENST00000585953 FSHBP01225 129 aa3.16□□□□□ -1.9
RPRD1A-204ENST00000585953 ITGB1P05556 798 aa3.16□□□□□ -1.9
RPRD1A-204ENST00000585953 FTH1P19P0C7X4 201 aa3.16□□□□□ -1.9
RPRD1A-204ENST00000585953 TYRP14679 529 aa3.16□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms