RNA–Protein interactions for RNA: ENST00000584692.1

RHOT1-216, Transcript of ras homolog family member T1, human

TSL 2

Gene RHOT1, Length 680 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RHOT1-216	ENST00000584692	PNMA8B	Q9ULN7	279 aa	Predicted RBP	6.38	□□□□□ -1.39
RHOT1-216	ENST00000584692	GAGE12B	A1L429	117 aa		6.37	□□□□□ -1.39
RHOT1-216	ENST00000584692	GAGE12H	A6NDE8	117 aa		6.37	□□□□□ -1.39
RHOT1-216	ENST00000584692	DTNB	O60941	627 aa		6.37	□□□□□ -1.39
RHOT1-216	ENST00000584692	S100B	P04271	92 aa	Predicted RBP	6.37	□□□□□ -1.39
RHOT1-216	ENST00000584692	ALAS1	P13196	640 aa		6.37	□□□□□ -1.39
RHOT1-216	ENST00000584692	FXR1	P51114	621 aa	Known RBP eCLIP	6.37	□□□□□ -1.39
RHOT1-216	ENST00000584692	ZNF280A	P59817	542 aa	Predicted RBP	6.37	□□□□□ -1.39
RHOT1-216	ENST00000584692	RNASE9	P60153	205 aa	Known RBP	6.37	□□□□□ -1.39
RHOT1-216	ENST00000584692	CREM	Q03060	361 aa		6.37	□□□□□ -1.39
RHOT1-216	ENST00000584692	MED25	Q71SY5	747 aa		6.37	□□□□□ -1.39
RHOT1-216	ENST00000584692	RHOU	Q7L0Q8	258 aa		6.37	□□□□□ -1.39
RHOT1-216	ENST00000584692	JPH3	Q8WXH2	748 aa	Predicted RBP	6.37	□□□□□ -1.39
RHOT1-216	ENST00000584692	GTPBP4	Q9BZE4	634 aa	Known RBP	6.37	□□□□□ -1.39
RHOT1-216	ENST00000584692	GPRC5B	Q9NZH0	403 aa		6.37	□□□□□ -1.39
RHOT1-216	ENST00000584692	TRPM5	Q9NZQ8	1165 aa		6.37	□□□□□ -1.39
RHOT1-216	ENST00000584692	ZNF180	Q9UJW8	692 aa		6.37	□□□□□ -1.39
RHOT1-216	ENST00000584692	TCRBV7S2A1N4T	A0A589	114 aa		6.36	□□□□□ -1.39
RHOT1-216	ENST00000584692	ZNF185	O15231	689 aa		6.36	□□□□□ -1.39
RHOT1-216	ENST00000584692	RFPL1	O75677	317 aa		6.36	□□□□□ -1.39
RHOT1-216	ENST00000584692	GCSH	P23434	173 aa		6.36	□□□□□ -1.39
RHOT1-216	ENST00000584692	ZFP36	P26651	326 aa	Known RBP	6.36	□□□□□ -1.39
RHOT1-216	ENST00000584692	KRTAP10-9	P60411	292 aa		6.36	□□□□□ -1.39
RHOT1-216	ENST00000584692	FAM189B	P81408	668 aa		6.36	□□□□□ -1.39
RHOT1-216	ENST00000584692	PABPC1L	Q4VXU2	614 aa	Known RBP	6.36	□□□□□ -1.39
RHOT1-216	ENST00000584692	PDCD4	Q53EL6	469 aa	Known RBP	6.36	□□□□□ -1.39
RHOT1-216	ENST00000584692	UBE3B	Q7Z3V4	1068 aa		6.36	□□□□□ -1.39
RHOT1-216	ENST00000584692	CATIP	Q7Z7H3	387 aa		6.36	□□□□□ -1.39
RHOT1-216	ENST00000584692	LDLRAD3	Q86YD5	345 aa		6.36	□□□□□ -1.39
RHOT1-216	ENST00000584692	RAVER1	Q8IY67	606 aa	Known RBP	6.36	□□□□□ -1.39
RHOT1-216	ENST00000584692	IL17RD	Q8NFM7	739 aa		6.36	□□□□□ -1.39
RHOT1-216	ENST00000584692	NLGN4Y	Q8NFZ3	816 aa	Predicted RBP	6.36	□□□□□ -1.39
RHOT1-216	ENST00000584692	LENG9	Q96B70	501 aa		6.36	□□□□□ -1.39
RHOT1-216	ENST00000584692	FAM193B	Q96PV7	902 aa	Predicted RBP	6.36	□□□□□ -1.39
RHOT1-216	ENST00000584692	ZNF768	Q9H5H4	540 aa	Known RBP	6.36	□□□□□ -1.39
RHOT1-216	ENST00000584692	ZIM2	Q9NZV7	527 aa		6.36	□□□□□ -1.39
RHOT1-216	ENST00000584692	MARCH11	A6NNE9	402 aa		6.35	□□□□□ -1.39
RHOT1-216	ENST00000584692	RNASET2	O00584	256 aa	Known RBP	6.35	□□□□□ -1.39
RHOT1-216	ENST00000584692	GRM6	O15303	877 aa		6.35	□□□□□ -1.39
RHOT1-216	ENST00000584692	SLC16A6	O15403	523 aa		6.35	□□□□□ -1.39
RHOT1-216	ENST00000584692	MTHFD1	P11586	935 aa	Known RBP	6.35	□□□□□ -1.39
RHOT1-216	ENST00000584692	SLC6A2	P23975	617 aa		6.35	□□□□□ -1.39
RHOT1-216	ENST00000584692	SLC6A4	P31645	630 aa		6.35	□□□□□ -1.39
RHOT1-216	ENST00000584692	PTGS2	P35354	604 aa		6.35	□□□□□ -1.39
RHOT1-216	ENST00000584692	ATAT1	Q5SQI0	421 aa		6.35	□□□□□ -1.39
RHOT1-216	ENST00000584692	THEMIS2	Q5TEJ8	643 aa		6.35	□□□□□ -1.39
RHOT1-216	ENST00000584692	GADL1	Q6ZQY3	521 aa		6.35	□□□□□ -1.39
RHOT1-216	ENST00000584692	ZNF483	Q8TF39	744 aa	Predicted RBP	6.35	□□□□□ -1.39
RHOT1-216	ENST00000584692	AIFM3	Q96NN9	605 aa		6.35	□□□□□ -1.39
RHOT1-216	ENST00000584692	TEX101	Q9BY14	249 aa		6.35	□□□□□ -1.39
RHOT1-216	ENST00000584692	SLC12A5	Q9H2X9	1139 aa		6.35	□□□□□ -1.39
RHOT1-216	ENST00000584692	MAN1C1	Q9NR34	630 aa		6.35	□□□□□ -1.39
RHOT1-216	ENST00000584692	SLC2A4RG	Q9NR83	387 aa		6.35	□□□□□ -1.39
RHOT1-216	ENST00000584692	KLHL11	Q9NVR0	708 aa		6.35	□□□□□ -1.39
RHOT1-216	ENST00000584692	FZD1	Q9UP38	647 aa		6.35	□□□□□ -1.39
RHOT1-216	ENST00000584692	POLH	Q9Y253	713 aa		6.35	□□□□□ -1.39
RHOT1-216	ENST00000584692	USP15	Q9Y4E8	981 aa	Predicted RBP	6.35	□□□□□ -1.39
RHOT1-216	ENST00000584692	KIAA0391	O15091	583 aa	Known RBP	6.34	□□□□□ -1.39
RHOT1-216	ENST00000584692	PPFIA4	O75335	1185 aa		6.34	□□□□□ -1.39
RHOT1-216	ENST00000584692	RPS6KA4	O75676	772 aa		6.34	□□□□□ -1.39
RHOT1-216	ENST00000584692	PRSS23	O95084	383 aa		6.34	□□□□□ -1.39
RHOT1-216	ENST00000584692	ITGB1	P05556	798 aa		6.34	□□□□□ -1.39
RHOT1-216	ENST00000584692	SBK3	P0C264	359 aa		6.34	□□□□□ -1.39
RHOT1-216	ENST00000584692	CT47B1	P0C2W7	299 aa	Predicted RBP	6.34	□□□□□ -1.39
RHOT1-216	ENST00000584692	SPATA31D3	P0C874	917 aa		6.34	□□□□□ -1.39
RHOT1-216	ENST00000584692	MAL	P21145	153 aa		6.34	□□□□□ -1.39
RHOT1-216	ENST00000584692	CYP2C19	P33261	490 aa		6.34	□□□□□ -1.39
RHOT1-216	ENST00000584692	NFE2	Q16621	373 aa	Predicted RBP	6.34	□□□□□ -1.39
RHOT1-216	ENST00000584692	PGS1	Q32NB8	556 aa		6.34	□□□□□ -1.39
RHOT1-216	ENST00000584692	BEAN1	Q3B7T3	259 aa		6.34	□□□□□ -1.39
RHOT1-216	ENST00000584692	KHDC1	Q4VXA5	237 aa	Known RBP	6.34	□□□□□ -1.39
RHOT1-216	ENST00000584692	LRRC55	Q6ZSA7	311 aa		6.34	□□□□□ -1.39
RHOT1-216	ENST00000584692	SPATA31D4	Q6ZUB0	917 aa		6.34	□□□□□ -1.39
RHOT1-216	ENST00000584692	C3orf20	Q8ND61	904 aa		6.34	□□□□□ -1.39
RHOT1-216	ENST00000584692	OR56A1	Q8NGH5	318 aa		6.34	□□□□□ -1.39
RHOT1-216	ENST00000584692	HAS1	Q92839	578 aa		6.34	□□□□□ -1.39
RHOT1-216	ENST00000584692	HPS3	Q969F9	1004 aa		6.34	□□□□□ -1.39
RHOT1-216	ENST00000584692	MVB12A	Q96EY5	273 aa		6.34	□□□□□ -1.39
RHOT1-216	ENST00000584692	MYEOV	Q96EZ4	313 aa		6.34	□□□□□ -1.39
RHOT1-216	ENST00000584692	PHACTR3	Q96KR7	559 aa		6.34	□□□□□ -1.39
RHOT1-216	ENST00000584692	AGAP2	Q99490	1192 aa		6.34	□□□□□ -1.39
RHOT1-216	ENST00000584692	VRK1	Q99986	396 aa	Predicted RBP	6.34	□□□□□ -1.39
RHOT1-216	ENST00000584692	REXO4	Q9GZR2	422 aa	Known RBP	6.34	□□□□□ -1.39
RHOT1-216	ENST00000584692	GSTO2	Q9H4Y5	243 aa		6.34	□□□□□ -1.39
RHOT1-216	ENST00000584692	AKIP1	Q9NQ31	210 aa		6.34	□□□□□ -1.39
RHOT1-216	ENST00000584692	DKK2	Q9UBU2	259 aa		6.34	□□□□□ -1.39
RHOT1-216	ENST00000584692	ATP11B	Q9Y2G3	1177 aa		6.34	□□□□□ -1.39
RHOT1-216	ENST00000584692	CDHR4	A6H8M9	788 aa		6.33	□□□□□ -1.4
RHOT1-216	ENST00000584692	NT5C1B-RDH14	C9J2C7	533 aa		6.33	□□□□□ -1.4
RHOT1-216	ENST00000584692	SLC43A1	O75387	559 aa		6.33	□□□□□ -1.4
RHOT1-216	ENST00000584692	NCR1	O76036	304 aa		6.33	□□□□□ -1.4
RHOT1-216	ENST00000584692	HAUS5	O94927	633 aa		6.33	□□□□□ -1.4
RHOT1-216	ENST00000584692	ARIH2	O95376	493 aa		6.33	□□□□□ -1.4
RHOT1-216	ENST00000584692	CD1A	P06126	327 aa		6.33	□□□□□ -1.4
RHOT1-216	ENST00000584692	CKB	P12277	381 aa		6.33	□□□□□ -1.4
RHOT1-216	ENST00000584692	HK3	P52790	923 aa		6.33	□□□□□ -1.4
RHOT1-216	ENST00000584692	NOG	Q13253	232 aa		6.33	□□□□□ -1.4
RHOT1-216	ENST00000584692	SNAPC2	Q13487	334 aa		6.33	□□□□□ -1.4
RHOT1-216	ENST00000584692	TSHZ3	Q63HK5	1081 aa		6.33	□□□□□ -1.4
RHOT1-216	ENST00000584692	MRGPRE	Q86SM8	312 aa		6.33	□□□□□ -1.4

Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms