RNA–Protein interactions for RNA: ENST00000583965.5

CDRT1-207, CMT1A duplicated region transcript 1, humanhuman

TSL 1 (best) BASIC

Gene CDRT1, Length 562 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1-207ENST00000583965 MIOSQ9NXC5 875 aa12.6□□□□□ -0.39
CDRT1-207ENST00000583965 ITGA11Q9UKX5 1188 aa12.6□□□□□ -0.39
CDRT1-207ENST00000583965 PLAGL2Q9UPG8 496 aa12.6□□□□□ -0.39
CDRT1-207ENST00000583965 PTPRJQ12913 1337 aa12.6□□□□□ -0.39
CDRT1-207ENST00000583965 GTPBP10A4D1E9 387 aaKnown RBP12.59□□□□□ -0.39
CDRT1-207ENST00000583965 TULP1O00294 542 aaPredicted RBP12.59□□□□□ -0.39
CDRT1-207ENST00000583965 SERPINC1P01008 464 aa12.59□□□□□ -0.39
CDRT1-207ENST00000583965 POMCP01189 267 aa12.59□□□□□ -0.39
CDRT1-207ENST00000583965 C4BPAP04003 597 aaKnown RBP12.59□□□□□ -0.39
CDRT1-207ENST00000583965 LRPAP1P30533 357 aa12.59□□□□□ -0.39
CDRT1-207ENST00000583965 RPL9P32969 192 aaKnown RBP12.59□□□□□ -0.39
CDRT1-207ENST00000583965 FMO5P49326 533 aa12.59□□□□□ -0.39
CDRT1-207ENST00000583965 AFF1P51825 1210 aaKnown RBP12.59□□□□□ -0.39
CDRT1-207ENST00000583965 PPP3CAQ08209 521 aa12.59□□□□□ -0.39
CDRT1-207ENST00000583965 DSC1Q08554 894 aa12.59□□□□□ -0.39
CDRT1-207ENST00000583965 MIIPQ5JXC2 388 aa12.59□□□□□ -0.39
CDRT1-207ENST00000583965 KRT39Q6A163 491 aa12.59□□□□□ -0.39
CDRT1-207ENST00000583965 C15orf39Q6ZRI6 1047 aa12.59□□□□□ -0.39
CDRT1-207ENST00000583965 SV2AQ7L0J3 742 aa12.59□□□□□ -0.39
CDRT1-207ENST00000583965 APTXQ7Z2E3 356 aaKnown RBP12.59□□□□□ -0.39
CDRT1-207ENST00000583965 TRAPPC11Q7Z392 1133 aa12.59□□□□□ -0.39
CDRT1-207ENST00000583965 OR5B17Q8NGF7 314 aa12.59□□□□□ -0.39
CDRT1-207ENST00000583965 DDX27Q96GQ7 796 aaKnown RBP12.59□□□□□ -0.39
CDRT1-207ENST00000583965 DPP3Q9NY33 737 aa12.59□□□□□ -0.39
CDRT1-207ENST00000583965 TAB2Q9NYJ8 693 aa12.59□□□□□ -0.39
CDRT1-207ENST00000583965 COQ4Q9Y3A0 265 aa12.59□□□□□ -0.39
CDRT1-207ENST00000583965 R3HCC1Q9Y3T6 440 aaKnown RBP12.59□□□□□ -0.39
CDRT1-207ENST00000583965 MYO9BQ13459 2157 aa12.59□□□□□ -0.39
CDRT1-207ENST00000583965 VWA8A3KMH1 1905 aa12.58□□□□□ -0.39
CDRT1-207ENST00000583965 LGALS16A8MUM7 142 aa12.58□□□□□ -0.4
CDRT1-207ENST00000583965 PES1O00541 588 aaKnown RBP12.58□□□□□ -0.4
CDRT1-207ENST00000583965 TLL1O43897 1013 aa12.58□□□□□ -0.4
CDRT1-207ENST00000583965 PHACTR2O75167 634 aa12.58□□□□□ -0.4
CDRT1-207ENST00000583965 PAX3P23760 479 aa12.58□□□□□ -0.4
CDRT1-207ENST00000583965 GCLMP48507 274 aa12.58□□□□□ -0.4
CDRT1-207ENST00000583965 GATMP50440 423 aa12.58□□□□□ -0.4
CDRT1-207ENST00000583965 FANCCQ00597 558 aa12.58□□□□□ -0.4
CDRT1-207ENST00000583965 MYL7Q01449 175 aa12.58□□□□□ -0.4
CDRT1-207ENST00000583965 BIRC3Q13489 604 aa12.58□□□□□ -0.4
CDRT1-207ENST00000583965 BTG3Q14201 252 aaPredicted RBP12.58□□□□□ -0.4
CDRT1-207ENST00000583965 CBWD6Q4V339 395 aa12.58□□□□□ -0.4
CDRT1-207ENST00000583965 CBWD3Q5JTY5 395 aa12.58□□□□□ -0.4
CDRT1-207ENST00000583965 CBWD5Q5RIA9 395 aa12.58□□□□□ -0.4
CDRT1-207ENST00000583965 TDRD10Q5VZ19 366 aaKnown RBP12.58□□□□□ -0.4
CDRT1-207ENST00000583965 LMBRD2Q68DH5 695 aaPredicted RBP12.58□□□□□ -0.4
CDRT1-207ENST00000583965 FAM117BQ6P1L5 589 aa12.58□□□□□ -0.4
CDRT1-207ENST00000583965 SARM1Q6SZW1 724 aa12.58□□□□□ -0.4
CDRT1-207ENST00000583965 COLGALT2Q8IYK4 626 aa12.58□□□□□ -0.4
CDRT1-207ENST00000583965 TDHQ8IZJ6 230 aa12.58□□□□□ -0.4
CDRT1-207ENST00000583965 C1orf127Q8N9H9 656 aa12.58□□□□□ -0.4
CDRT1-207ENST00000583965 FBXL13Q8NEE6 735 aa12.58□□□□□ -0.4
CDRT1-207ENST00000583965 SP7Q8TDD2 431 aaPredicted RBP12.58□□□□□ -0.4
CDRT1-207ENST00000583965 ANP32BQ92688 251 aaKnown RBP12.58□□□□□ -0.4
CDRT1-207ENST00000583965 C18orf25Q96B23 403 aaPredicted RBP12.58□□□□□ -0.4
CDRT1-207ENST00000583965 PDLIM2Q96JY6 352 aa12.58□□□□□ -0.4
CDRT1-207ENST00000583965 PPP1R9BQ96SB3 815 aa12.58□□□□□ -0.4
CDRT1-207ENST00000583965 TMEM175Q9BSA9 504 aa12.58□□□□□ -0.4
CDRT1-207ENST00000583965 VPS16Q9H269 839 aa12.58□□□□□ -0.4
CDRT1-207ENST00000583965 PLXNA4Q9HCM2 1894 aa12.58□□□□□ -0.4
CDRT1-207ENST00000583965 TUBGCP4Q9UGJ1 667 aa12.58□□□□□ -0.4
CDRT1-207ENST00000583965 A0A1B0GTH6 734 aa12.57□□□□□ -0.4
CDRT1-207ENST00000583965 ANO9A1A5B4 782 aa12.57□□□□□ -0.4
CDRT1-207ENST00000583965 CBFA2T2O43439 604 aa12.57□□□□□ -0.4
CDRT1-207ENST00000583965 DDHD2O94830 711 aa12.57□□□□□ -0.4
CDRT1-207ENST00000583965 ITGB3P05106 788 aa12.57□□□□□ -0.4
CDRT1-207ENST00000583965 TPM3P06753 285 aa12.57□□□□□ -0.4
CDRT1-207ENST00000583965 ATICP31939 592 aa12.57□□□□□ -0.4
CDRT1-207ENST00000583965 PNPLA4P41247 253 aa12.57□□□□□ -0.4
CDRT1-207ENST00000583965 PIK3CAP42336 1068 aa12.57□□□□□ -0.4
CDRT1-207ENST00000583965 UBASH3AP57075 661 aa12.57□□□□□ -0.4
CDRT1-207ENST00000583965 RBP5P82980 135 aa12.57□□□□□ -0.4
CDRT1-207ENST00000583965 SOX4Q06945 474 aaPredicted RBP12.57□□□□□ -0.4
CDRT1-207ENST00000583965 CCDC173Q0VFZ6 552 aa12.57□□□□□ -0.4
CDRT1-207ENST00000583965 TRPC3Q13507 836 aa12.57□□□□□ -0.4
CDRT1-207ENST00000583965 PAN2Q504Q3 1202 aaKnown RBP12.57□□□□□ -0.4
CDRT1-207ENST00000583965 FKBP15Q5T1M5 1219 aa12.57□□□□□ -0.4
CDRT1-207ENST00000583965 TMCO2Q7Z6W1 182 aaPredicted RBP12.57□□□□□ -0.4
CDRT1-207ENST00000583965 FIBCD1Q8N539 461 aa12.57□□□□□ -0.4
CDRT1-207ENST00000583965 LRRC52Q8N7C0 313 aa12.57□□□□□ -0.4
CDRT1-207ENST00000583965 ZNF560Q96MR9 790 aa12.57□□□□□ -0.4
CDRT1-207ENST00000583965 PRO3102Q9H379 93 aa12.57□□□□□ -0.4
CDRT1-207ENST00000583965 CWH43Q9H720 699 aa12.57□□□□□ -0.4
CDRT1-207ENST00000583965 NRDE2Q9H7Z3 1164 aa12.57□□□□□ -0.4
CDRT1-207ENST00000583965 MMRN2Q9H8L6 949 aa12.57□□□□□ -0.4
CDRT1-207ENST00000583965 RTN4Q9NQC3 1192 aaKnown RBP12.57□□□□□ -0.4
CDRT1-207ENST00000583965 SIX4Q9UIU6 781 aa12.57□□□□□ -0.4
CDRT1-207ENST00000583965 PCDHA11Q9Y5I1 949 aa12.57□□□□□ -0.4
CDRT1-207ENST00000583965 TSC2P49815 1807 aa12.57□□□□□ -0.4
CDRT1-207ENST00000583965 CHD9Q3L8U1 2897 aa12.57□□□□□ -0.4
CDRT1-207ENST00000583965 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.56□□□□□ -0.4
CDRT1-207ENST00000583965 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.56□□□□□ -0.4
CDRT1-207ENST00000583965 TMEM189-UBE2V1I3L0A0 370 aa12.56□□□□□ -0.4
CDRT1-207ENST00000583965 PODXLO00592 558 aa12.56□□□□□ -0.4
CDRT1-207ENST00000583965 PIRO00625 290 aa12.56□□□□□ -0.4
CDRT1-207ENST00000583965 ZC3H11AO75152 810 aaKnown RBP eCLIP12.56□□□□□ -0.4
CDRT1-207ENST00000583965 STAU1O95793 577 aaKnown RBP12.56□□□□□ -0.4
CDRT1-207ENST00000583965 HLA-DRAP01903 254 aa12.56□□□□□ -0.4
CDRT1-207ENST00000583965 ALDH2P05091 517 aa12.56□□□□□ -0.4
CDRT1-207ENST00000583965 KRT19P08727 400 aa12.56□□□□□ -0.4
CDRT1-207ENST00000583965 LAG3P18627 525 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms