RNA–Protein interactions for RNA: ENST00000582792.5

SS18-222, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18, Length 531 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-222ENST00000582792 FOSBP53539 338 aa14.9□□□□□ -0.02
SS18-222ENST00000582792 ROR1Q01973 937 aa14.9□□□□□ -0.02
SS18-222ENST00000582792 ADCY1Q08828 1119 aa14.9□□□□□ -0.02
SS18-222ENST00000582792 ERMNQ8TAM6 284 aa14.9□□□□□ -0.02
SS18-222ENST00000582792 DNASE1L2Q92874 299 aa14.9□□□□□ -0.02
SS18-222ENST00000582792 SECISBP2LQ93073 1101 aaKnown RBP14.9□□□□□ -0.02
SS18-222ENST00000582792 IFT74Q96LB3 600 aa14.9□□□□□ -0.02
SS18-222ENST00000582792 SH2B1Q9NRF2 756 aaPredicted RBP14.9□□□□□ -0.02
SS18-222ENST00000582792 SMIM28A0A1B0GU29 152 aa14.89□□□□□ -0.03
SS18-222ENST00000582792 JAK2O60674 1132 aa14.89□□□□□ -0.03
SS18-222ENST00000582792 ABLIM3O94929 683 aa14.89□□□□□ -0.03
SS18-222ENST00000582792 ATF2P15336 505 aa14.89□□□□□ -0.03
SS18-222ENST00000582792 MUTP22033 750 aa14.89□□□□□ -0.03
SS18-222ENST00000582792 FCARP24071 287 aa14.89□□□□□ -0.03
SS18-222ENST00000582792 ELF1P32519 619 aa14.89□□□□□ -0.03
SS18-222ENST00000582792 SOX4Q06945 474 aaPredicted RBP14.89□□□□□ -0.03
SS18-222ENST00000582792 XKR4Q5GH76 650 aa14.89□□□□□ -0.03
SS18-222ENST00000582792 PRSS36Q5K4E3 855 aa14.89□□□□□ -0.03
SS18-222ENST00000582792 TSSK4Q6SA08 328 aa14.89□□□□□ -0.03
SS18-222ENST00000582792 APBB1IPQ7Z5R6 666 aaPredicted RBP14.89□□□□□ -0.03
SS18-222ENST00000582792 KIFAP3Q92845 792 aa14.89□□□□□ -0.03
SS18-222ENST00000582792 FAM126AQ9BYI3 521 aaPredicted RBP14.89□□□□□ -0.03
SS18-222ENST00000582792 TNFSF13BQ9Y275 285 aa14.89□□□□□ -0.03
SS18-222ENST00000582792 KMT2BQ9UMN6 2715 aaPredicted RBP14.89□□□□□ -0.03
SS18-222ENST00000582792 WDR27A2RRH5 827 aa14.88□□□□□ -0.03
SS18-222ENST00000582792 K7ERI5 159 aa14.88□□□□□ -0.03
SS18-222ENST00000582792 PRRG1O14668 218 aa14.88□□□□□ -0.03
SS18-222ENST00000582792 ZNF197O14709 1029 aa14.88□□□□□ -0.03
SS18-222ENST00000582792 TBC1D4O60343 1298 aa14.88□□□□□ -0.03
SS18-222ENST00000582792 MICAL2O94851 1124 aa14.88□□□□□ -0.03
SS18-222ENST00000582792 OR52Z1P0C646 297 aa14.88□□□□□ -0.03
SS18-222ENST00000582792 GRM5P41594 1212 aa14.88□□□□□ -0.03
SS18-222ENST00000582792 YARSP54577 528 aaKnown RBP14.88□□□□□ -0.03
SS18-222ENST00000582792 LMNB2Q03252 620 aa14.88□□□□□ -0.03
SS18-222ENST00000582792 MTAPQ13126 283 aa14.88□□□□□ -0.03
SS18-222ENST00000582792 ORC2Q13416 577 aaPredicted RBP14.88□□□□□ -0.03
SS18-222ENST00000582792 ALKAL1Q6UXT8 129 aa14.88□□□□□ -0.03
SS18-222ENST00000582792 TCEAL8Q8IYN2 117 aa14.88□□□□□ -0.03
SS18-222ENST00000582792 ZNF687Q8N1G0 1237 aa14.88□□□□□ -0.03
SS18-222ENST00000582792 CEP120Q8N960 986 aa14.88□□□□□ -0.03
SS18-222ENST00000582792 TCEAL4Q96EI5 215 aa14.88□□□□□ -0.03
SS18-222ENST00000582792 CORO1BQ9BR76 489 aa14.88□□□□□ -0.03
SS18-222ENST00000582792 CCDC94Q9BW85 323 aaPredicted RBP14.88□□□□□ -0.03
SS18-222ENST00000582792 BRD9Q9H8M2 597 aa14.88□□□□□ -0.03
SS18-222ENST00000582792 POLD4Q9HCU8 107 aa14.88□□□□□ -0.03
SS18-222ENST00000582792 TOPORSQ9NS56 1045 aaPredicted RBP14.88□□□□□ -0.03
SS18-222ENST00000582792 SLC38A7Q9NVC3 462 aa14.88□□□□□ -0.03
SS18-222ENST00000582792 COL4A2P08572 1712 aa14.88□□□□□ -0.03
SS18-222ENST00000582792 PRR5-ARHGAP8B1AHC4 643 aa14.87□□□□□ -0.03
SS18-222ENST00000582792 PODXLO00592 558 aa14.87□□□□□ -0.03
SS18-222ENST00000582792 MAN2B1O00754 1011 aa14.87□□□□□ -0.03
SS18-222ENST00000582792 SYN3O14994 580 aa14.87□□□□□ -0.03
SS18-222ENST00000582792 TDGF1P13385 188 aa14.87□□□□□ -0.03
SS18-222ENST00000582792 TGM1P22735 817 aa14.87□□□□□ -0.03
SS18-222ENST00000582792 ATXN1P54253 815 aaKnown RBP14.87□□□□□ -0.03
SS18-222ENST00000582792 ARHGAP8P85298 464 aa14.87□□□□□ -0.03
SS18-222ENST00000582792 MRPL58Q14197 206 aaKnown RBP14.87□□□□□ -0.03
SS18-222ENST00000582792 GRM2Q14416 872 aa14.87□□□□□ -0.03
SS18-222ENST00000582792 ECM1Q16610 540 aa14.87□□□□□ -0.03
SS18-222ENST00000582792 FAM78AQ5JUQ0 283 aa14.87□□□□□ -0.03
SS18-222ENST00000582792 HAUS3Q68CZ6 603 aa14.87□□□□□ -0.03
SS18-222ENST00000582792 MAMSTRQ6ZN01 415 aa14.87□□□□□ -0.03
SS18-222ENST00000582792 ASB16Q96NS5 453 aa14.87□□□□□ -0.03
SS18-222ENST00000582792 TRMT61BQ9BVS5 477 aaKnown RBP14.87□□□□□ -0.03
SS18-222ENST00000582792 CDT1Q9H211 546 aa14.87□□□□□ -0.03
SS18-222ENST00000582792 CHRDQ9H2X0 955 aa14.87□□□□□ -0.03
SS18-222ENST00000582792 CYP4F11Q9HBI6 524 aa14.87□□□□□ -0.03
SS18-222ENST00000582792 ZFP14Q9HCL3 533 aa14.87□□□□□ -0.03
SS18-222ENST00000582792 NDRG2Q9UN36 371 aaKnown RBP14.87□□□□□ -0.03
SS18-222ENST00000582792 INSL5Q9Y5Q6 135 aa14.87□□□□□ -0.03
SS18-222ENST00000582792 PHLPP2Q6ZVD8 1323 aa14.87□□□□□ -0.03
SS18-222ENST00000582792 SPTBN2O15020 2390 aa14.87□□□□□ -0.03
SS18-222ENST00000582792 CACNA1BQ00975 2339 aa14.86□□□□□ -0.03
SS18-222ENST00000582792 H7C4K7 107 aa14.86□□□□□ -0.03
SS18-222ENST00000582792 NRG2O14511 850 aaPredicted RBP14.86□□□□□ -0.03
SS18-222ENST00000582792 SEC24AO95486 1093 aa14.86□□□□□ -0.03
SS18-222ENST00000582792 KCNE1P15382 129 aa14.86□□□□□ -0.03
SS18-222ENST00000582792 CCR2P41597 374 aa14.86□□□□□ -0.03
SS18-222ENST00000582792 NRLP54845 237 aa14.86□□□□□ -0.03
SS18-222ENST00000582792 ARPP19P56211 112 aa14.86□□□□□ -0.03
SS18-222ENST00000582792 OSTNP61366 133 aa14.86□□□□□ -0.03
SS18-222ENST00000582792 SAFBQ15424 915 aaKnown RBP eCLIP14.86□□□□□ -0.03
SS18-222ENST00000582792 ZNF174Q15697 407 aa14.86□□□□□ -0.03
SS18-222ENST00000582792 ZNF568Q3ZCX4 644 aa14.86□□□□□ -0.03
SS18-222ENST00000582792 TPGS2Q68CL5 300 aa14.86□□□□□ -0.03
SS18-222ENST00000582792 PDZD4Q76G19 769 aaPredicted RBP14.86□□□□□ -0.03
SS18-222ENST00000582792 MAP4K3Q8IVH8 894 aa14.86□□□□□ -0.03
SS18-222ENST00000582792 IRF7Q92985 503 aa14.86□□□□□ -0.03
SS18-222ENST00000582792 ZMAT2Q96NC0 199 aaKnown RBP14.86□□□□□ -0.03
SS18-222ENST00000582792 ACO2Q99798 780 aaKnown RBP14.86□□□□□ -0.03
SS18-222ENST00000582792 IER2Q9BTL4 223 aa14.86□□□□□ -0.03
SS18-222ENST00000582792 BHMT2Q9H2M3 363 aa14.86□□□□□ -0.03
SS18-222ENST00000582792 PTPRHQ9HD43 1115 aa14.86□□□□□ -0.03
SS18-222ENST00000582792 TRPV5Q9NQA5 729 aa14.86□□□□□ -0.03
SS18-222ENST00000582792 FBXL5Q9UKA1 691 aa14.86□□□□□ -0.03
SS18-222ENST00000582792 CDV3Q9UKY7 258 aaKnown RBP14.86□□□□□ -0.03
SS18-222ENST00000582792 TPRP12270 2363 aaKnown RBP14.86□□□□□ -0.03
SS18-222ENST00000582792 F5P12259 2224 aa14.86□□□□□ -0.03
SS18-222ENST00000582792 ACACBO00763 2458 aa14.86□□□□□ -0.03
SS18-222ENST00000582792 CCT6AP40227 531 aaKnown RBP14.85□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms