RNA–Protein interactions for RNA: ENST00000581761.5

MKS1-211, Transcript of Meckel syndrome, type 1, humanhuman

TSL 3

Gene MKS1, Length 812 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-211ENST00000581761 TMEM191BP0C7N4 346 aa15.72■□□□□ 0.11
MKS1-211ENST00000581761 TMEM253P0C7T8 217 aa15.72■□□□□ 0.11
MKS1-211ENST00000581761 NOP2P46087 812 aaKnown RBP15.72■□□□□ 0.11
MKS1-211ENST00000581761 PDE6CP51160 858 aa15.72■□□□□ 0.11
MKS1-211ENST00000581761 GALCP54803 685 aa15.72■□□□□ 0.11
MKS1-211ENST00000581761 NCOA4Q13772 614 aa15.72■□□□□ 0.11
MKS1-211ENST00000581761 TEX35Q5T0J7 233 aa15.72■□□□□ 0.11
MKS1-211ENST00000581761 PRPF38BQ5VTL8 546 aaKnown RBP15.72■□□□□ 0.11
MKS1-211ENST00000581761 NOP9Q86U38 636 aaKnown RBP15.72■□□□□ 0.11
MKS1-211ENST00000581761 CEP120Q8N960 986 aa15.72■□□□□ 0.11
MKS1-211ENST00000581761 EPS8L1Q8TE68 723 aa15.72■□□□□ 0.11
MKS1-211ENST00000581761 GOLGA1Q92805 767 aa15.72■□□□□ 0.11
MKS1-211ENST00000581761 ANKRD36BP1Q96IX9 119 aa15.72■□□□□ 0.11
MKS1-211ENST00000581761 GCOM2Q9BZD3 368 aaPredicted RBP15.72■□□□□ 0.11
MKS1-211ENST00000581761 IMPG2Q9BZV3 1241 aa15.72■□□□□ 0.11
MKS1-211ENST00000581761 MTMR12Q9C0I1 747 aa15.72■□□□□ 0.11
MKS1-211ENST00000581761 APOBEC3GQ9HC16 384 aaKnown RBP15.72■□□□□ 0.11
MKS1-211ENST00000581761 PUF60Q9UHX1 559 aaKnown RBP15.72■□□□□ 0.11
MKS1-211ENST00000581761 NOCTQ9UK39 431 aaKnown RBP15.72■□□□□ 0.11
MKS1-211ENST00000581761 HYOU1Q9Y4L1 999 aa15.72■□□□□ 0.11
MKS1-211ENST00000581761 NCANO14594 1321 aa15.71■□□□□ 0.11
MKS1-211ENST00000581761 A0A0A6YYK5 440 aaPredicted RBP15.71■□□□□ 0.11
MKS1-211ENST00000581761 MBLAC1A4D2B0 266 aaPredicted RBP15.71■□□□□ 0.11
MKS1-211ENST00000581761 CLTAP09496 248 aa15.71■□□□□ 0.11
MKS1-211ENST00000581761 STAG3L1P0CL83 205 aa15.71■□□□□ 0.11
MKS1-211ENST00000581761 CXCL8P10145 99 aa15.71■□□□□ 0.11
MKS1-211ENST00000581761 CYP11B1P15538 503 aa15.71■□□□□ 0.11
MKS1-211ENST00000581761 CHRNB2P17787 502 aa15.71■□□□□ 0.11
MKS1-211ENST00000581761 ARF4P18085 180 aaPredicted RBP15.71■□□□□ 0.11
MKS1-211ENST00000581761 MNX1P50219 401 aaPredicted RBP15.71■□□□□ 0.11
MKS1-211ENST00000581761 NOP14P78316 857 aaKnown RBP15.71■□□□□ 0.11
MKS1-211ENST00000581761 TFAMQ00059 246 aaKnown RBP15.71■□□□□ 0.11
MKS1-211ENST00000581761 CDC42EP1Q00587 391 aa15.71■□□□□ 0.11
MKS1-211ENST00000581761 CKAP4Q07065 602 aaKnown RBP15.71■□□□□ 0.11
MKS1-211ENST00000581761 TMEM62Q0P6H9 643 aa15.71■□□□□ 0.11
MKS1-211ENST00000581761 TRPC3Q13507 836 aa15.71■□□□□ 0.11
MKS1-211ENST00000581761 CUL2Q13617 745 aa15.71■□□□□ 0.11
MKS1-211ENST00000581761 KYAT1Q16773 422 aa15.71■□□□□ 0.11
MKS1-211ENST00000581761 DUOXA2Q1HG44 320 aa15.71■□□□□ 0.11
MKS1-211ENST00000581761 KIZQ2M2Z5 673 aa15.71■□□□□ 0.11
MKS1-211ENST00000581761 ERCC6LQ2NKX8 1250 aa15.71■□□□□ 0.11
MKS1-211ENST00000581761 RUFY4Q6ZNE9 571 aa15.71■□□□□ 0.11
MKS1-211ENST00000581761 SLC47A2Q86VL8 602 aa15.71■□□□□ 0.11
MKS1-211ENST00000581761 ZNF710Q8N1W2 664 aa15.71■□□□□ 0.11
MKS1-211ENST00000581761 ANKRD7Q92527 254 aa15.71■□□□□ 0.11
MKS1-211ENST00000581761 ADAMTS10Q9H324 1103 aa15.71■□□□□ 0.11
MKS1-211ENST00000581761 TAS2R14Q9NYV8 317 aa15.71■□□□□ 0.11
MKS1-211ENST00000581761 PCDHGC5Q9Y5F6 944 aa15.71■□□□□ 0.11
MKS1-211ENST00000581761 C17orf102A2RUQ5 167 aa15.7■□□□□ 0.1
MKS1-211ENST00000581761 CTAGE15A4D2H0 777 aa15.7■□□□□ 0.1
MKS1-211ENST00000581761 GRID2IPA4D2P6 1211 aa15.7■□□□□ 0.1
MKS1-211ENST00000581761 SEPT4O43236 478 aa15.7■□□□□ 0.1
MKS1-211ENST00000581761 NCK2O43639 380 aa15.7■□□□□ 0.1
MKS1-211ENST00000581761 B4GALT4O60513 344 aa15.7■□□□□ 0.1
MKS1-211ENST00000581761 SRGAP2O75044 1071 aa15.7■□□□□ 0.1
MKS1-211ENST00000581761 DUSP11O75319 330 aaKnown RBP15.7■□□□□ 0.1
MKS1-211ENST00000581761 TFRCP02786 760 aaKnown RBP15.7■□□□□ 0.1
MKS1-211ENST00000581761 CTAGE8P0CG41 777 aa15.7■□□□□ 0.1
MKS1-211ENST00000581761 FGFR4P22455 802 aa15.7■□□□□ 0.1
MKS1-211ENST00000581761 TBXAS1P24557 533 aaPredicted RBP15.7■□□□□ 0.1
MKS1-211ENST00000581761 RBM10P98175 930 aaKnown RBP15.7■□□□□ 0.1
MKS1-211ENST00000581761 CDR2Q01850 454 aa15.7■□□□□ 0.1
MKS1-211ENST00000581761 CTAGE6Q86UF2 777 aa15.7■□□□□ 0.1
MKS1-211ENST00000581761 PALB2Q86YC2 1186 aa15.7■□□□□ 0.1
MKS1-211ENST00000581761 CTAGE4Q8IX94 777 aa15.7■□□□□ 0.1
MKS1-211ENST00000581761 EFCAB13Q8IY85 973 aa15.7■□□□□ 0.1
MKS1-211ENST00000581761 CAGE1Q8TC20 777 aa15.7■□□□□ 0.1
MKS1-211ENST00000581761 CTNNBL1Q8WYA6 563 aaPredicted RBP15.7■□□□□ 0.1
MKS1-211ENST00000581761 CAPZA3Q96KX2 299 aa15.7■□□□□ 0.1
MKS1-211ENST00000581761 PCDHB18PQ96TA0 734 aa15.7■□□□□ 0.1
MKS1-211ENST00000581761 ARID3AQ99856 593 aa15.7■□□□□ 0.1
MKS1-211ENST00000581761 ADPGKQ9BRR6 497 aa15.7■□□□□ 0.1
MKS1-211ENST00000581761 DDX20Q9UHI6 824 aaKnown RBP15.7■□□□□ 0.1
MKS1-211ENST00000581761 OGDHLQ9ULD0 1010 aa15.7■□□□□ 0.1
MKS1-211ENST00000581761 SNX12Q9UMY4 172 aa15.7■□□□□ 0.1
MKS1-211ENST00000581761 GINS2Q9Y248 185 aa15.7■□□□□ 0.1
MKS1-211ENST00000581761 NUB1Q9Y5A7 615 aa15.7■□□□□ 0.1
MKS1-211ENST00000581761 PCDHB4Q9Y5E5 795 aa15.7■□□□□ 0.1
MKS1-211ENST00000581761 UMODL1Q5DID0 1318 aa15.69■□□□□ 0.1
MKS1-211ENST00000581761 ANKRD62A6NC57 917 aa15.69■□□□□ 0.1
MKS1-211ENST00000581761 MYADML2A6NDP7 307 aa15.69■□□□□ 0.1
MKS1-211ENST00000581761 LACTBL1A8MY62 500 aa15.69■□□□□ 0.1
MKS1-211ENST00000581761 KPNA6O60684 536 aa15.69■□□□□ 0.1
MKS1-211ENST00000581761 RTN2O75298 545 aa15.69■□□□□ 0.1
MKS1-211ENST00000581761 GPR32O75388 356 aa15.69■□□□□ 0.1
MKS1-211ENST00000581761 FTCDO95954 541 aa15.69■□□□□ 0.1
MKS1-211ENST00000581761 MMEP08473 750 aa15.69■□□□□ 0.1
MKS1-211ENST00000581761 C6orf222P0C671 652 aaPredicted RBP15.69■□□□□ 0.1
MKS1-211ENST00000581761 ABCB4P21439 1286 aa15.69■□□□□ 0.1
MKS1-211ENST00000581761 BPIFB4P59827 614 aa15.69■□□□□ 0.1
MKS1-211ENST00000581761 PURAQ00577 322 aaKnown RBP15.69■□□□□ 0.1
MKS1-211ENST00000581761 FMO1Q01740 532 aa15.69■□□□□ 0.1
MKS1-211ENST00000581761 HIC1Q14526 733 aa15.69■□□□□ 0.1
MKS1-211ENST00000581761 RSRC2Q7L4I2 434 aaKnown RBP15.69■□□□□ 0.1
MKS1-211ENST00000581761 CATSPER4Q7RTX7 472 aa15.69■□□□□ 0.1
MKS1-211ENST00000581761 APBB1IPQ7Z5R6 666 aaPredicted RBP15.69■□□□□ 0.1
MKS1-211ENST00000581761 UBE2Q1Q7Z7E8 422 aa15.69■□□□□ 0.1
MKS1-211ENST00000581761 TMEM192Q8IY95 271 aa15.69■□□□□ 0.1
MKS1-211ENST00000581761 TPCN2Q8NHX9 752 aa15.69■□□□□ 0.1
MKS1-211ENST00000581761 ACP6Q9NPH0 428 aa15.69■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms