RNA–Protein interactions for RNA: ENST00000581711.1

SMCHD1-207, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 4

Gene SMCHD1, Length 546 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-207ENST00000581711 GPATCH3Q96I76 525 aa6.09□□□□□ -1.43
SMCHD1-207ENST00000581711 UNKLQ9H9P5 680 aaKnown RBP6.09□□□□□ -1.43
SMCHD1-207ENST00000581711 EDARQ9UNE0 448 aa6.09□□□□□ -1.43
SMCHD1-207ENST00000581711 RPTORQ8N122 1335 aa6.08□□□□□ -1.44
SMCHD1-207ENST00000581711 PRKD3O94806 890 aa6.08□□□□□ -1.44
SMCHD1-207ENST00000581711 GPANK1O95872 356 aa6.08□□□□□ -1.44
SMCHD1-207ENST00000581711 VAV2P52735 878 aa6.08□□□□□ -1.44
SMCHD1-207ENST00000581711 MST1LQ2TV78 715 aa6.08□□□□□ -1.44
SMCHD1-207ENST00000581711 CT83Q5H943 113 aa6.08□□□□□ -1.44
SMCHD1-207ENST00000581711 RRP12Q5JTH9 1297 aaKnown RBP6.08□□□□□ -1.44
SMCHD1-207ENST00000581711 KIAA1614Q5VZ46 1190 aa6.08□□□□□ -1.44
SMCHD1-207ENST00000581711 FRMD7Q6ZUT3 714 aa6.08□□□□□ -1.44
SMCHD1-207ENST00000581711 RASSF3Q86WH2 238 aa6.08□□□□□ -1.44
SMCHD1-207ENST00000581711 DRC7Q8IY82 874 aa6.08□□□□□ -1.44
SMCHD1-207ENST00000581711 TRMT2AQ8IZ69 625 aaKnown RBP6.08□□□□□ -1.44
SMCHD1-207ENST00000581711 SARAFQ96BY9 339 aa6.08□□□□□ -1.44
SMCHD1-207ENST00000581711 TIMP4Q99727 224 aa6.08□□□□□ -1.44
SMCHD1-207ENST00000581711 ATP8A1Q9Y2Q0 1164 aa6.08□□□□□ -1.44
SMCHD1-207ENST00000581711 ATRNL1Q5VV63 1379 aa6.07□□□□□ -1.44
SMCHD1-207ENST00000581711 ANKRD62A6NC57 917 aa6.07□□□□□ -1.44
SMCHD1-207ENST00000581711 MANSC4A6NHS7 340 aaPredicted RBP6.07□□□□□ -1.44
SMCHD1-207ENST00000581711 WNT10BO00744 389 aa6.07□□□□□ -1.44
SMCHD1-207ENST00000581711 KCNAB3O43448 404 aa6.07□□□□□ -1.44
SMCHD1-207ENST00000581711 ULK1O75385 1050 aa6.07□□□□□ -1.44
SMCHD1-207ENST00000581711 LPLP06858 475 aa6.07□□□□□ -1.44
SMCHD1-207ENST00000581711 ALOX15P16050 662 aaPredicted RBP6.07□□□□□ -1.44
SMCHD1-207ENST00000581711 GCSHP23434 173 aa6.07□□□□□ -1.44
SMCHD1-207ENST00000581711 EZH2Q15910 746 aaKnown RBP6.07□□□□□ -1.44
SMCHD1-207ENST00000581711 PITRM1Q5JRX3 1037 aa6.07□□□□□ -1.44
SMCHD1-207ENST00000581711 GRASPQ7Z6J2 395 aaPredicted RBP6.07□□□□□ -1.44
SMCHD1-207ENST00000581711 PDPRQ8NCN5 879 aa6.07□□□□□ -1.44
SMCHD1-207ENST00000581711 HASPINQ8TF76 798 aa6.07□□□□□ -1.44
SMCHD1-207ENST00000581711 TGFBRAP1Q8WUH2 860 aa6.07□□□□□ -1.44
SMCHD1-207ENST00000581711 USP25Q9UHP3 1055 aa6.07□□□□□ -1.44
SMCHD1-207ENST00000581711 ENTPD2Q9Y5L3 495 aa6.07□□□□□ -1.44
SMCHD1-207ENST00000581711 COL4A3BPQ9Y5P4 624 aa6.07□□□□□ -1.44
SMCHD1-207ENST00000581711 SHROOM4Q9ULL8 1493 aa6.07□□□□□ -1.44
SMCHD1-207ENST00000581711 CPEP16870 476 aa6.06□□□□□ -1.44
SMCHD1-207ENST00000581711 GPD1P21695 349 aa6.06□□□□□ -1.44
SMCHD1-207ENST00000581711 SCAND1P57086 179 aa6.06□□□□□ -1.44
SMCHD1-207ENST00000581711 SESN3P58005 492 aa6.06□□□□□ -1.44
SMCHD1-207ENST00000581711 FAM50AQ14320 339 aaKnown RBP6.06□□□□□ -1.44
SMCHD1-207ENST00000581711 SPATS2Q86XZ4 545 aaKnown RBP6.06□□□□□ -1.44
SMCHD1-207ENST00000581711 FBXO18Q8NFZ0 1043 aa6.06□□□□□ -1.44
SMCHD1-207ENST00000581711 SSH3Q8TE77 659 aa6.06□□□□□ -1.44
SMCHD1-207ENST00000581711 PAWRQ96IZ0 340 aaKnown RBP6.06□□□□□ -1.44
SMCHD1-207ENST00000581711 KCTD10Q9H3F6 313 aa6.06□□□□□ -1.44
SMCHD1-207ENST00000581711 CPNE5Q9HCH3 593 aa6.06□□□□□ -1.44
SMCHD1-207ENST00000581711 KCNG1Q9UIX4 513 aa6.06□□□□□ -1.44
SMCHD1-207ENST00000581711 MCM8Q9UJA3 840 aa6.06□□□□□ -1.44
SMCHD1-207ENST00000581711 PHLDB1Q86UU1 1377 aa6.06□□□□□ -1.44
SMCHD1-207ENST00000581711 PEX1O43933 1283 aa6.05□□□□□ -1.44
SMCHD1-207ENST00000581711 PHF2O75151 1096 aa6.05□□□□□ -1.44
SMCHD1-207ENST00000581711 WT1P19544 449 aaPredicted RBP6.05□□□□□ -1.44
SMCHD1-207ENST00000581711 LGALS4P56470 323 aa6.05□□□□□ -1.44
SMCHD1-207ENST00000581711 SRSF7Q16629 238 aaKnown RBP eCLIP6.05□□□□□ -1.44
SMCHD1-207ENST00000581711 RNF219Q5W0B1 726 aaPredicted RBP6.05□□□□□ -1.44
SMCHD1-207ENST00000581711 FOXR2Q6PJQ5 311 aa6.05□□□□□ -1.44
SMCHD1-207ENST00000581711 ZBTB9Q96C00 473 aa6.05□□□□□ -1.44
SMCHD1-207ENST00000581711 EAF2Q96CJ1 260 aaPredicted RBP6.05□□□□□ -1.44
SMCHD1-207ENST00000581711 MRI1Q9BV20 369 aa6.05□□□□□ -1.44
SMCHD1-207ENST00000581711 PCDH12Q9NPG4 1184 aa6.05□□□□□ -1.44
SMCHD1-207ENST00000581711 C14orf119Q9NWQ9 140 aa6.05□□□□□ -1.44
SMCHD1-207ENST00000581711 SIK3Q9Y2K2 1263 aa6.05□□□□□ -1.44
SMCHD1-207ENST00000581711 MTO1Q9Y2Z2 717 aaKnown RBP6.05□□□□□ -1.44
SMCHD1-207ENST00000581711 PRSS23O95084 383 aa6.04□□□□□ -1.44
SMCHD1-207ENST00000581711 CDK11BP21127 795 aaKnown RBP6.04□□□□□ -1.44
SMCHD1-207ENST00000581711 GPR162Q16538 588 aa6.04□□□□□ -1.44
SMCHD1-207ENST00000581711 AFMIDQ63HM1 303 aa6.04□□□□□ -1.44
SMCHD1-207ENST00000581711 COLGALT2Q8IYK4 626 aa6.04□□□□□ -1.44
SMCHD1-207ENST00000581711 PRPF38AQ8NAV1 312 aaKnown RBP6.04□□□□□ -1.44
SMCHD1-207ENST00000581711 OR7D4Q8NG98 312 aa6.04□□□□□ -1.44
SMCHD1-207ENST00000581711 WASF1Q92558 559 aa6.04□□□□□ -1.44
SMCHD1-207ENST00000581711 GOLGA8AA7E2F4 631 aa6.03□□□□□ -1.44
SMCHD1-207ENST00000581711 SLC6A2P23975 617 aa6.03□□□□□ -1.44
SMCHD1-207ENST00000581711 ITPKBP27987 946 aa6.03□□□□□ -1.44
SMCHD1-207ENST00000581711 FOLR3P41439 243 aa6.03□□□□□ -1.44
SMCHD1-207ENST00000581711 SP140Q13342 867 aa6.03□□□□□ -1.44
SMCHD1-207ENST00000581711 PTPROQ16827 1216 aa6.03□□□□□ -1.44
SMCHD1-207ENST00000581711 GEN1Q17RS7 908 aa6.03□□□□□ -1.44
SMCHD1-207ENST00000581711 KIAA0895LQ68EN5 471 aa6.03□□□□□ -1.44
SMCHD1-207ENST00000581711 CNTD1Q8N815 330 aa6.03□□□□□ -1.44
SMCHD1-207ENST00000581711 LMBR1Q8WVP7 490 aa6.03□□□□□ -1.44
SMCHD1-207ENST00000581711 AHCYL2Q96HN2 611 aaKnown RBP6.03□□□□□ -1.44
SMCHD1-207ENST00000581711 TMX1Q9H3N1 280 aa6.03□□□□□ -1.44
SMCHD1-207ENST00000581711 BCO1Q9HAY6 547 aa6.03□□□□□ -1.44
SMCHD1-207ENST00000581711 SLC5A4Q9NY91 659 aa6.03□□□□□ -1.44
SMCHD1-207ENST00000581711 KATNA1O75449 491 aa6.02□□□□□ -1.45
SMCHD1-207ENST00000581711 POMCP01189 267 aa6.02□□□□□ -1.45
SMCHD1-207ENST00000581711 PRKCGP05129 697 aa6.02□□□□□ -1.45
SMCHD1-207ENST00000581711 ADSLP30566 484 aaPredicted RBP6.02□□□□□ -1.45
SMCHD1-207ENST00000581711 GUCY2FP51841 1108 aa6.02□□□□□ -1.45
SMCHD1-207ENST00000581711 ERVK-21P61565 698 aa6.02□□□□□ -1.45
SMCHD1-207ENST00000581711 EXOSC10Q01780 885 aaKnown RBP6.02□□□□□ -1.45
SMCHD1-207ENST00000581711 KRTAP2-2Q9BYT5 123 aa6.02□□□□□ -1.45
SMCHD1-207ENST00000581711 QRSL1Q9H0R6 528 aaKnown RBP6.02□□□□□ -1.45
SMCHD1-207ENST00000581711 CCDC8Q9H0W5 538 aaPredicted RBP6.02□□□□□ -1.45
SMCHD1-207ENST00000581711 FAM30AQ9NZY2 134 aa6.02□□□□□ -1.45
SMCHD1-207ENST00000581711 YY2O15391 372 aa6.01□□□□□ -1.45
SMCHD1-207ENST00000581711 ORC4O43929 436 aa6.01□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms