RNA–Protein interactions for RNA: ENST00000581180.1

MKS1-210, Transcript of Meckel syndrome, type 1, humanhuman

TSL 2

Gene MKS1, Length 899 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-210ENST00000581180 WDR49Q8IV35 697 aa16.35■□□□□ 0.21
MKS1-210ENST00000581180 BEST2Q8NFU1 509 aa16.35■□□□□ 0.21
MKS1-210ENST00000581180 OR5B17Q8NGF7 314 aa16.35■□□□□ 0.21
MKS1-210ENST00000581180 CXorf38Q8TB03 319 aa16.35■□□□□ 0.21
MKS1-210ENST00000581180 ENOX1Q8TC92 643 aaKnown RBP16.35■□□□□ 0.21
MKS1-210ENST00000581180 ZNF516Q92618 1163 aa16.35■□□□□ 0.21
MKS1-210ENST00000581180 CCDC127Q96BQ5 260 aa16.35■□□□□ 0.21
MKS1-210ENST00000581180 FAM84AQ96KN4 292 aa16.35■□□□□ 0.21
MKS1-210ENST00000581180 UROC1Q96N76 676 aa16.35■□□□□ 0.21
MKS1-210ENST00000581180 POP1Q99575 1024 aaKnown RBP16.35■□□□□ 0.21
MKS1-210ENST00000581180 TTYH1Q9H313 450 aaPredicted RBP16.35■□□□□ 0.21
MKS1-210ENST00000581180 ZNF576Q9H609 170 aa16.35■□□□□ 0.21
MKS1-210ENST00000581180 MARCH5Q9NX47 278 aa16.35■□□□□ 0.21
MKS1-210ENST00000581180 FAN1Q9Y2M0 1017 aa16.35■□□□□ 0.21
MKS1-210ENST00000581180 PCDHB12Q9Y5F1 795 aa16.35■□□□□ 0.21
MKS1-210ENST00000581180 EPOPA6NHQ4 379 aa16.34■□□□□ 0.21
MKS1-210ENST00000581180 TMEM189-UBE2V1I3L0A0 370 aa16.34■□□□□ 0.21
MKS1-210ENST00000581180 DLATP10515 647 aaKnown RBP16.34■□□□□ 0.21
MKS1-210ENST00000581180 IGFBP6P24592 240 aaPredicted RBP16.34■□□□□ 0.21
MKS1-210ENST00000581180 RPL9P32969 192 aaKnown RBP16.34■□□□□ 0.21
MKS1-210ENST00000581180 ALDH7A1P49419 539 aaKnown RBP16.34■□□□□ 0.21
MKS1-210ENST00000581180 CLCNKBP51801 687 aa16.34■□□□□ 0.21
MKS1-210ENST00000581180 VAMP7P51809 220 aa16.34■□□□□ 0.21
MKS1-210ENST00000581180 MARSP56192 900 aaKnown RBP16.34■□□□□ 0.21
MKS1-210ENST00000581180 DLG4P78352 724 aa16.34■□□□□ 0.21
MKS1-210ENST00000581180 TFAMQ00059 246 aaKnown RBP16.34■□□□□ 0.21
MKS1-210ENST00000581180 BFSP1Q12934 665 aa16.34■□□□□ 0.21
MKS1-210ENST00000581180 GPR153Q6NV75 609 aa16.34■□□□□ 0.21
MKS1-210ENST00000581180 FRMD5Q7Z6J6 570 aa16.34■□□□□ 0.21
MKS1-210ENST00000581180 IRF2BP1Q8IU81 584 aa16.34■□□□□ 0.21
MKS1-210ENST00000581180 C1orf127Q8N9H9 656 aa16.34■□□□□ 0.21
MKS1-210ENST00000581180 KLHL23Q8NBE8 558 aa16.34■□□□□ 0.21
MKS1-210ENST00000581180 CACTINQ8WUQ7 758 aaKnown RBP16.34■□□□□ 0.21
MKS1-210ENST00000581180 BCL7CQ8WUZ0 217 aaPredicted RBP16.34■□□□□ 0.21
MKS1-210ENST00000581180 RABGGTAQ92696 567 aa16.34■□□□□ 0.21
MKS1-210ENST00000581180 DDX27Q96GQ7 796 aaKnown RBP16.34■□□□□ 0.21
MKS1-210ENST00000581180 FNBP1Q96RU3 617 aa16.34■□□□□ 0.21
MKS1-210ENST00000581180 CERS4Q9HA82 394 aa16.34■□□□□ 0.21
MKS1-210ENST00000581180 DPP3Q9NY33 737 aa16.34■□□□□ 0.21
MKS1-210ENST00000581180 ANO9A1A5B4 782 aa16.33■□□□□ 0.2
MKS1-210ENST00000581180 F8W810 466 aa16.33■□□□□ 0.2
MKS1-210ENST00000581180 PODXLO00592 558 aa16.33■□□□□ 0.2
MKS1-210ENST00000581180 PIRO00625 290 aa16.33■□□□□ 0.2
MKS1-210ENST00000581180 IKBKBO14920 756 aa16.33■□□□□ 0.2
MKS1-210ENST00000581180 FGFR1OPO95684 399 aaKnown RBP16.33■□□□□ 0.2
MKS1-210ENST00000581180 GNA14O95837 355 aa16.33■□□□□ 0.2
MKS1-210ENST00000581180 EFEMP2O95967 443 aa16.33■□□□□ 0.2
MKS1-210ENST00000581180 ITGB1P05556 798 aa16.33■□□□□ 0.2
MKS1-210ENST00000581180 KRT13P13646 458 aa16.33■□□□□ 0.2
MKS1-210ENST00000581180 TNNI1P19237 187 aa16.33■□□□□ 0.2
MKS1-210ENST00000581180 PPM1AP35813 382 aa16.33■□□□□ 0.2
MKS1-210ENST00000581180 PLCB3Q01970 1234 aa16.33■□□□□ 0.2
MKS1-210ENST00000581180 DUOXA2Q1HG44 320 aa16.33■□□□□ 0.2
MKS1-210ENST00000581180 SCARA3Q6AZY7 606 aa16.33■□□□□ 0.2
MKS1-210ENST00000581180 DCLRE1AQ6PJP8 1040 aa16.33■□□□□ 0.2
MKS1-210ENST00000581180 C3orf58Q8NDZ4 430 aa16.33■□□□□ 0.2
MKS1-210ENST00000581180 IGSF21Q96ID5 467 aa16.33■□□□□ 0.2
MKS1-210ENST00000581180 ANKRD36BP1Q96IX9 119 aa16.33■□□□□ 0.2
MKS1-210ENST00000581180 BPIFA3Q9BQP9 254 aa16.33■□□□□ 0.2
MKS1-210ENST00000581180 COLEC11Q9BWP8 271 aa16.33■□□□□ 0.2
MKS1-210ENST00000581180 MTMR12Q9C0I1 747 aa16.33■□□□□ 0.2
MKS1-210ENST00000581180 METTL14Q9HCE5 456 aaKnown RBP16.33■□□□□ 0.2
MKS1-210ENST00000581180 SPG21Q9NZD8 308 aa16.33■□□□□ 0.2
MKS1-210ENST00000581180 MTUS1Q9ULD2 1270 aa16.33■□□□□ 0.2
MKS1-210ENST00000581180 PRG3Q9Y2Y8 225 aaPredicted RBP16.33■□□□□ 0.2
MKS1-210ENST00000581180 PRRC2BQ5JSZ5 2229 aaKnown RBP16.33■□□□□ 0.2
MKS1-210ENST00000581180 H3BNC9 293 aa16.32■□□□□ 0.2
MKS1-210ENST00000581180 PPEF2O14830 753 aa16.32■□□□□ 0.2
MKS1-210ENST00000581180 FGF18O76093 207 aa16.32■□□□□ 0.2
MKS1-210ENST00000581180 KIF4AO95239 1232 aa16.32■□□□□ 0.2
MKS1-210ENST00000581180 C4BPAP04003 597 aaKnown RBP16.32■□□□□ 0.2
MKS1-210ENST00000581180 TMEM191BP0C7N4 346 aa16.32■□□□□ 0.2
MKS1-210ENST00000581180 TRIM49P0CI25 452 aa16.32■□□□□ 0.2
MKS1-210ENST00000581180 TRIM49CP0CI26 452 aa16.32■□□□□ 0.2
MKS1-210ENST00000581180 FXR1P51114 621 aaKnown RBP eCLIP16.32■□□□□ 0.2
MKS1-210ENST00000581180 NCAPHQ15003 741 aa16.32■□□□□ 0.2
MKS1-210ENST00000581180 C9orf57Q5W0N0 161 aa16.32■□□□□ 0.2
MKS1-210ENST00000581180 C15orf39Q6ZRI6 1047 aa16.32■□□□□ 0.2
MKS1-210ENST00000581180 RNF168Q8IYW5 571 aaPredicted RBP16.32■□□□□ 0.2
MKS1-210ENST00000581180 FBXO22Q8NEZ5 403 aa16.32■□□□□ 0.2
MKS1-210ENST00000581180 SPPL3Q8TCT6 385 aa16.32■□□□□ 0.2
MKS1-210ENST00000581180 ARNTL2Q8WYA1 636 aa16.32■□□□□ 0.2
MKS1-210ENST00000581180 VN1R3Q9BXE9 311 aa16.32■□□□□ 0.2
MKS1-210ENST00000581180 THAP9Q9H5L6 903 aa16.32■□□□□ 0.2
MKS1-210ENST00000581180 ARMCX3Q9UH62 379 aaPredicted RBP16.32■□□□□ 0.2
MKS1-210ENST00000581180 SIX4Q9UIU6 781 aa16.32■□□□□ 0.2
MKS1-210ENST00000581180 NFE2L3Q9Y4A8 694 aa16.32■□□□□ 0.2
MKS1-210ENST00000581180 CDH23Q9H251 3354 aa16.32■□□□□ 0.2
MKS1-210ENST00000581180 SZT2Q5T011 3432 aa16.31■□□□□ 0.2
MKS1-210ENST00000581180 B3GAT3O94766 335 aa16.31■□□□□ 0.2
MKS1-210ENST00000581180 TNNC2P02585 160 aa16.31■□□□□ 0.2
MKS1-210ENST00000581180 AP3M2P53677 418 aa16.31■□□□□ 0.2
MKS1-210ENST00000581180 PPP3CAQ08209 521 aa16.31■□□□□ 0.2
MKS1-210ENST00000581180 GPM6BQ13491 265 aa16.31■□□□□ 0.2
MKS1-210ENST00000581180 TPD52L1Q16890 204 aaPredicted RBP16.31■□□□□ 0.2
MKS1-210ENST00000581180 ZACNQ401N2 412 aa16.31■□□□□ 0.2
MKS1-210ENST00000581180 CCDC40Q4G0X9 1142 aa16.31■□□□□ 0.2
MKS1-210ENST00000581180 ZNF697Q5TEC3 545 aa16.31■□□□□ 0.2
MKS1-210ENST00000581180 TRAPPC11Q7Z392 1133 aa16.31■□□□□ 0.2
MKS1-210ENST00000581180 USP37Q86T82 979 aa16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms