RNA–Protein interactions for RNA: ENST00000580654.5

SMARCE1-217, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-217ENST00000580654 PTPN2P17706 415 aa8.57□□□□□ -1.04
SMARCE1-217ENST00000580654 AKAP5P24588 427 aa8.57□□□□□ -1.04
SMARCE1-217ENST00000580654 CIITAP33076 1130 aa8.57□□□□□ -1.04
SMARCE1-217ENST00000580654 OR1D2P34982 312 aa8.57□□□□□ -1.04
SMARCE1-217ENST00000580654 CCINQ13939 588 aa8.57□□□□□ -1.04
SMARCE1-217ENST00000580654 PKDCCQ504Y2 493 aa8.57□□□□□ -1.04
SMARCE1-217ENST00000580654 PRR16Q569H4 304 aa8.57□□□□□ -1.04
SMARCE1-217ENST00000580654 XKR3Q5GH77 459 aa8.57□□□□□ -1.04
SMARCE1-217ENST00000580654 DGKKQ5KSL6 1271 aa8.57□□□□□ -1.04
SMARCE1-217ENST00000580654 DAB2IPQ5VWQ8 1189 aa8.57□□□□□ -1.04
SMARCE1-217ENST00000580654 PLA2G4FQ68DD2 849 aa8.57□□□□□ -1.04
SMARCE1-217ENST00000580654 ANO5Q75V66 913 aa8.57□□□□□ -1.04
SMARCE1-217ENST00000580654 SRGAP1Q7Z6B7 1085 aa8.57□□□□□ -1.04
SMARCE1-217ENST00000580654 CEP57Q86XR8 500 aa8.57□□□□□ -1.04
SMARCE1-217ENST00000580654 LURAP1LQ8IV03 231 aa8.57□□□□□ -1.04
SMARCE1-217ENST00000580654 FANCBQ8NB91 859 aa8.57□□□□□ -1.04
SMARCE1-217ENST00000580654 CPB2Q96IY4 423 aa8.57□□□□□ -1.04
SMARCE1-217ENST00000580654 CXCL16Q9H2A7 254 aa8.57□□□□□ -1.04
SMARCE1-217ENST00000580654 OSBPL3Q9H4L5 887 aa8.57□□□□□ -1.04
SMARCE1-217ENST00000580654 POLR3BQ9NW08 1133 aaPredicted RBP8.57□□□□□ -1.04
SMARCE1-217ENST00000580654 KLK14Q9P0G3 267 aa8.57□□□□□ -1.04
SMARCE1-217ENST00000580654 TCEAL9Q9UHQ7 104 aa8.57□□□□□ -1.04
SMARCE1-217ENST00000580654 GIT1Q9Y2X7 761 aa8.57□□□□□ -1.04
SMARCE1-217ENST00000580654 MYO18BQ8IUG5 2567 aa8.57□□□□□ -1.04
SMARCE1-217ENST00000580654 ATG2BQ96BY7 2078 aa8.57□□□□□ -1.04
SMARCE1-217ENST00000580654 KIAA1549LQ6ZVL6 1849 aa8.57□□□□□ -1.04
SMARCE1-217ENST00000580654 PCNX2A6NKB5 2137 aa8.56□□□□□ -1.04
SMARCE1-217ENST00000580654 CCDC163A0A0D9SF12 145 aa8.56□□□□□ -1.04
SMARCE1-217ENST00000580654 ARHGEF37A1IGU5 675 aa8.56□□□□□ -1.04
SMARCE1-217ENST00000580654 BCLAF3A2AJT9 711 aaKnown RBP8.56□□□□□ -1.04
SMARCE1-217ENST00000580654 MYBPHLA2RUH7 354 aa8.56□□□□□ -1.04
SMARCE1-217ENST00000580654 CASTOR2A6NHX0 329 aa8.56□□□□□ -1.04
SMARCE1-217ENST00000580654 SPECC1L-ADORA2AF8WAN1 911 aa8.56□□□□□ -1.04
SMARCE1-217ENST00000580654 ZNF263O14978 683 aa8.56□□□□□ -1.04
SMARCE1-217ENST00000580654 PRC1O43663 620 aa8.56□□□□□ -1.04
SMARCE1-217ENST00000580654 AKAP3O75969 853 aa8.56□□□□□ -1.04
SMARCE1-217ENST00000580654 MICAL2O94851 1124 aa8.56□□□□□ -1.04
SMARCE1-217ENST00000580654 CCDC192P0DO97 292 aa8.56□□□□□ -1.04
SMARCE1-217ENST00000580654 CALM1P0DP23 149 aa8.56□□□□□ -1.04
SMARCE1-217ENST00000580654 CALM2P0DP24 149 aa8.56□□□□□ -1.04
SMARCE1-217ENST00000580654 CALM3P0DP25 149 aa8.56□□□□□ -1.04
SMARCE1-217ENST00000580654 CTHP32929 405 aa8.56□□□□□ -1.04
SMARCE1-217ENST00000580654 GRIK3Q13003 919 aa8.56□□□□□ -1.04
SMARCE1-217ENST00000580654 B3GNT9Q6UX72 402 aa8.56□□□□□ -1.04
SMARCE1-217ENST00000580654 NFXL1Q6ZNB6 911 aa8.56□□□□□ -1.04
SMARCE1-217ENST00000580654 RTL10Q7L3V2 364 aa8.56□□□□□ -1.04
SMARCE1-217ENST00000580654 MFSD6LQ8IWD5 586 aa8.56□□□□□ -1.04
SMARCE1-217ENST00000580654 GLIS3Q8NEA6 775 aa8.56□□□□□ -1.04
SMARCE1-217ENST00000580654 DEPDC1BQ8WUY9 529 aa8.56□□□□□ -1.04
SMARCE1-217ENST00000580654 PRPF31Q8WWY3 499 aaKnown RBP8.56□□□□□ -1.04
SMARCE1-217ENST00000580654 SLC5A5Q92911 643 aa8.56□□□□□ -1.04
SMARCE1-217ENST00000580654 SMARCD2Q92925 531 aa8.56□□□□□ -1.04
SMARCE1-217ENST00000580654 MSANTD3Q96H12 275 aa8.56□□□□□ -1.04
SMARCE1-217ENST00000580654 CORO1BQ9BR76 489 aa8.56□□□□□ -1.04
SMARCE1-217ENST00000580654 CSRNP2Q9H175 543 aa8.56□□□□□ -1.04
SMARCE1-217ENST00000580654 BARHL2Q9NY43 387 aa8.56□□□□□ -1.04
SMARCE1-217ENST00000580654 MTRRQ9UBK8 725 aa8.56□□□□□ -1.04
SMARCE1-217ENST00000580654 DACH1Q9UI36 760 aa8.56□□□□□ -1.04
SMARCE1-217ENST00000580654 CDY1Q9Y6F8 540 aa8.56□□□□□ -1.04
SMARCE1-217ENST00000580654 CELSR3Q9NYQ7 3312 aa8.56□□□□□ -1.04
SMARCE1-217ENST00000580654 TNRC6BQ9UPQ9 1833 aaKnown RBP8.56□□□□□ -1.04
SMARCE1-217ENST00000580654 NUP210Q8TEM1 1887 aaPredicted RBP8.55□□□□□ -1.04
SMARCE1-217ENST00000580654 MYO16Q9Y6X6 1858 aa8.55□□□□□ -1.04
SMARCE1-217ENST00000580654 SPAARA0A1B0GVQ0 90 aa8.55□□□□□ -1.04
SMARCE1-217ENST00000580654 CCDC69A6NI79 296 aa8.55□□□□□ -1.04
SMARCE1-217ENST00000580654 EIF4E1BA6NMX2 242 aaKnown RBP8.55□□□□□ -1.04
SMARCE1-217ENST00000580654 HEPACAM2A8MVW5 462 aa8.55□□□□□ -1.04
SMARCE1-217ENST00000580654 PATE3B3GLJ2 98 aa8.55□□□□□ -1.04
SMARCE1-217ENST00000580654 DCLK1O15075 740 aa8.55□□□□□ -1.04
SMARCE1-217ENST00000580654 CAVIN2O95810 425 aa8.55□□□□□ -1.04
SMARCE1-217ENST00000580654 GJA1P17302 382 aa8.55□□□□□ -1.04
SMARCE1-217ENST00000580654 FGFR3P22607 806 aa8.55□□□□□ -1.04
SMARCE1-217ENST00000580654 SFNP31947 248 aa8.55□□□□□ -1.04
SMARCE1-217ENST00000580654 LIFRP42702 1097 aa8.55□□□□□ -1.04
SMARCE1-217ENST00000580654 JAK3P52333 1124 aa8.55□□□□□ -1.04
SMARCE1-217ENST00000580654 NPEPPSP55786 919 aa8.55□□□□□ -1.04
SMARCE1-217ENST00000580654 FGD1P98174 961 aa8.55□□□□□ -1.04
SMARCE1-217ENST00000580654 CREB5Q02930 508 aa8.55□□□□□ -1.04
SMARCE1-217ENST00000580654 LAMTOR4Q0VGL1 99 aa8.55□□□□□ -1.04
SMARCE1-217ENST00000580654 TUSC3Q13454 348 aa8.55□□□□□ -1.04
SMARCE1-217ENST00000580654 PON2Q15165 354 aa8.55□□□□□ -1.04
SMARCE1-217ENST00000580654 NAB2Q15742 525 aa8.55□□□□□ -1.04
SMARCE1-217ENST00000580654 AMHR2Q16671 573 aa8.55□□□□□ -1.04
SMARCE1-217ENST00000580654 CD300LGQ6UXG3 332 aa8.55□□□□□ -1.04
SMARCE1-217ENST00000580654 CDR2LQ86X02 465 aaPredicted RBP8.55□□□□□ -1.04
SMARCE1-217ENST00000580654 EXOC6Q8TAG9 804 aa8.55□□□□□ -1.04
SMARCE1-217ENST00000580654 TTC8Q8TAM2 541 aa8.55□□□□□ -1.04
SMARCE1-217ENST00000580654 TMEM143Q96AN5 459 aa8.55□□□□□ -1.04
SMARCE1-217ENST00000580654 LRRC3BQ96PB8 259 aa8.55□□□□□ -1.04
SMARCE1-217ENST00000580654 RIT2Q99578 217 aa8.55□□□□□ -1.04
SMARCE1-217ENST00000580654 MTA3Q9BTC8 594 aa8.55□□□□□ -1.04
SMARCE1-217ENST00000580654 TMUB1Q9BVT8 246 aa8.55□□□□□ -1.04
SMARCE1-217ENST00000580654 C8orf33Q9H7E9 229 aaPredicted RBP8.55□□□□□ -1.04
SMARCE1-217ENST00000580654 TRPV4Q9HBA0 871 aa8.55□□□□□ -1.04
SMARCE1-217ENST00000580654 TMEM9BQ9NQ34 198 aa8.55□□□□□ -1.04
SMARCE1-217ENST00000580654 SNTG2Q9NY99 539 aa8.55□□□□□ -1.04
SMARCE1-217ENST00000580654 HECTD1Q9ULT8 2610 aa8.55□□□□□ -1.04
SMARCE1-217ENST00000580654 CFAP46Q8IYW2 2715 aa8.55□□□□□ -1.04
SMARCE1-217ENST00000580654 THADAQ6YHU6 1953 aa8.55□□□□□ -1.04
SMARCE1-217ENST00000580654 ABCA7Q8IZY2 2146 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms