RNA–Protein interactions for RNA: ENST00000579853.5

CDK5RAP3-216, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 714 nt, Biotype retained intron.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-216ENST00000579853 APBB1IPQ7Z5R6 666 aaPredicted RBP13.46□□□□□ -0.25
CDK5RAP3-216ENST00000579853 ELMOD1Q8N336 334 aa13.46□□□□□ -0.25
CDK5RAP3-216ENST00000579853 SPEM1Q8N4L4 309 aa13.46□□□□□ -0.25
CDK5RAP3-216ENST00000579853 LEMD2Q8NC56 503 aa13.46□□□□□ -0.25
CDK5RAP3-216ENST00000579853 PDZD7Q9H5P4 517 aa13.46□□□□□ -0.25
CDK5RAP3-216ENST00000579853 ZNF334Q9HCZ1 680 aaPredicted RBP13.46□□□□□ -0.25
CDK5RAP3-216ENST00000579853 ANGPTL2Q9UKU9 493 aa13.46□□□□□ -0.25
CDK5RAP3-216ENST00000579853 KCNJ14Q9UNX9 436 aa13.46□□□□□ -0.25
CDK5RAP3-216ENST00000579853 PIAS3Q9Y6X2 628 aa13.46□□□□□ -0.25
CDK5RAP3-216ENST00000579853 PKD1L2Q7Z442 2459 aa13.45□□□□□ -0.26
CDK5RAP3-216ENST00000579853 ACKR2O00590 384 aa13.45□□□□□ -0.26
CDK5RAP3-216ENST00000579853 USO1O60763 962 aaKnown RBP13.45□□□□□ -0.26
CDK5RAP3-216ENST00000579853 ABLIM3O94929 683 aa13.45□□□□□ -0.26
CDK5RAP3-216ENST00000579853 REC8O95072 547 aa13.45□□□□□ -0.26
CDK5RAP3-216ENST00000579853 PAPSS2O95340 614 aaPredicted RBP13.45□□□□□ -0.26
CDK5RAP3-216ENST00000579853 ATF2P15336 505 aa13.45□□□□□ -0.26
CDK5RAP3-216ENST00000579853 FCARP24071 287 aa13.45□□□□□ -0.26
CDK5RAP3-216ENST00000579853 TOB2Q14106 344 aaPredicted RBP13.45□□□□□ -0.26
CDK5RAP3-216ENST00000579853 LRRC32Q14392 662 aa13.45□□□□□ -0.26
CDK5RAP3-216ENST00000579853 GRM2Q14416 872 aa13.45□□□□□ -0.26
CDK5RAP3-216ENST00000579853 FAM78AQ5JUQ0 283 aa13.45□□□□□ -0.26
CDK5RAP3-216ENST00000579853 CYP4A22Q5TCH4 519 aa13.45□□□□□ -0.26
CDK5RAP3-216ENST00000579853 TPGS2Q68CL5 300 aa13.45□□□□□ -0.26
CDK5RAP3-216ENST00000579853 IL31Q6EBC2 164 aa13.45□□□□□ -0.26
CDK5RAP3-216ENST00000579853 IQCEQ6IPM2 695 aa13.45□□□□□ -0.26
CDK5RAP3-216ENST00000579853 PDZD4Q76G19 769 aaPredicted RBP13.45□□□□□ -0.26
CDK5RAP3-216ENST00000579853 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.45□□□□□ -0.26
CDK5RAP3-216ENST00000579853 MAP4K3Q8IVH8 894 aa13.45□□□□□ -0.26
CDK5RAP3-216ENST00000579853 TCEAL8Q8IYN2 117 aa13.45□□□□□ -0.26
CDK5RAP3-216ENST00000579853 SMARCD2Q92925 531 aa13.45□□□□□ -0.26
CDK5RAP3-216ENST00000579853 E2F7Q96AV8 911 aa13.45□□□□□ -0.26
CDK5RAP3-216ENST00000579853 AIFM3Q96NN9 605 aa13.45□□□□□ -0.26
CDK5RAP3-216ENST00000579853 ASB16Q96NS5 453 aa13.45□□□□□ -0.26
CDK5RAP3-216ENST00000579853 CORO1BQ9BR76 489 aa13.45□□□□□ -0.26
CDK5RAP3-216ENST00000579853 MAFFQ9ULX9 164 aa13.45□□□□□ -0.26
CDK5RAP3-216ENST00000579853 SPEGQ15772 3267 aa13.44□□□□□ -0.26
CDK5RAP3-216ENST00000579853 H7C4K7 107 aa13.44□□□□□ -0.26
CDK5RAP3-216ENST00000579853 PRKCBP05771 671 aa13.44□□□□□ -0.26
CDK5RAP3-216ENST00000579853 TKTP29401 623 aaKnown RBP13.44□□□□□ -0.26
CDK5RAP3-216ENST00000579853 GDI1P31150 447 aa13.44□□□□□ -0.26
CDK5RAP3-216ENST00000579853 ROR1Q01973 937 aa13.44□□□□□ -0.26
CDK5RAP3-216ENST00000579853 PPP2R5AQ15172 486 aa13.44□□□□□ -0.26
CDK5RAP3-216ENST00000579853 CALCRLQ16602 461 aa13.44□□□□□ -0.26
CDK5RAP3-216ENST00000579853 PRSS36Q5K4E3 855 aa13.44□□□□□ -0.26
CDK5RAP3-216ENST00000579853 LONP2Q86WA8 852 aa13.44□□□□□ -0.26
CDK5RAP3-216ENST00000579853 NOSTRINQ8IVI9 506 aa13.44□□□□□ -0.26
CDK5RAP3-216ENST00000579853 DDX27Q96GQ7 796 aaKnown RBP13.44□□□□□ -0.26
CDK5RAP3-216ENST00000579853 PPP1R10Q96QC0 940 aaKnown RBP13.44□□□□□ -0.26
CDK5RAP3-216ENST00000579853 GPR88Q9GZN0 384 aa13.44□□□□□ -0.26
CDK5RAP3-216ENST00000579853 TTC12Q9H892 705 aaPredicted RBP13.44□□□□□ -0.26
CDK5RAP3-216ENST00000579853 TRPV4Q9HBA0 871 aa13.44□□□□□ -0.26
CDK5RAP3-216ENST00000579853 ZSWIM6Q9HCJ5 1215 aa13.44□□□□□ -0.26
CDK5RAP3-216ENST00000579853 BRMS1Q9HCU9 246 aa13.44□□□□□ -0.26
CDK5RAP3-216ENST00000579853 CYP46A1Q9Y6A2 500 aa13.44□□□□□ -0.26
CDK5RAP3-216ENST00000579853 NBEAQ8NFP9 2946 aa13.43□□□□□ -0.26
CDK5RAP3-216ENST00000579853 STK36Q9NRP7 1315 aa13.43□□□□□ -0.26
CDK5RAP3-216ENST00000579853 WDR27A2RRH5 827 aa13.43□□□□□ -0.26
CDK5RAP3-216ENST00000579853 ZNF263O14978 683 aa13.43□□□□□ -0.26
CDK5RAP3-216ENST00000579853 SYN3O14994 580 aa13.43□□□□□ -0.26
CDK5RAP3-216ENST00000579853 EPB41L2O43491 1005 aaKnown RBP13.43□□□□□ -0.26
CDK5RAP3-216ENST00000579853 ATP2B1P20020 1258 aa13.43□□□□□ -0.26
CDK5RAP3-216ENST00000579853 CLCNKBP51801 687 aa13.43□□□□□ -0.26
CDK5RAP3-216ENST00000579853 EFNA5P52803 228 aa13.43□□□□□ -0.26
CDK5RAP3-216ENST00000579853 LIMK1P53667 647 aa13.43□□□□□ -0.26
CDK5RAP3-216ENST00000579853 UPP1Q16831 310 aa13.43□□□□□ -0.26
CDK5RAP3-216ENST00000579853 MFSD6LQ8IWD5 586 aa13.43□□□□□ -0.26
CDK5RAP3-216ENST00000579853 CSGALNACT1Q8TDX6 532 aa13.43□□□□□ -0.26
CDK5RAP3-216ENST00000579853 PIGOQ8TEQ8 1089 aa13.43□□□□□ -0.26
CDK5RAP3-216ENST00000579853 WASF1Q92558 559 aa13.43□□□□□ -0.26
CDK5RAP3-216ENST00000579853 ZNF512Q96ME7 567 aaPredicted RBP13.43□□□□□ -0.26
CDK5RAP3-216ENST00000579853 C8orf33Q9H7E9 229 aaPredicted RBP13.43□□□□□ -0.26
CDK5RAP3-216ENST00000579853 CYP4F11Q9HBI6 524 aa13.43□□□□□ -0.26
CDK5RAP3-216ENST00000579853 TOPORSQ9NS56 1045 aaPredicted RBP13.43□□□□□ -0.26
CDK5RAP3-216ENST00000579853 SLC38A7Q9NVC3 462 aa13.43□□□□□ -0.26
CDK5RAP3-216ENST00000579853 GDAQ9Y2T3 454 aa13.43□□□□□ -0.26
CDK5RAP3-216ENST00000579853 INSL5Q9Y5Q6 135 aa13.43□□□□□ -0.26
CDK5RAP3-216ENST00000579853 TRIP11Q15643 1979 aa13.43□□□□□ -0.26
CDK5RAP3-216ENST00000579853 CHRNB1P11230 501 aa13.42□□□□□ -0.26
CDK5RAP3-216ENST00000579853 HOXA6P31267 233 aa13.42□□□□□ -0.26
CDK5RAP3-216ENST00000579853 NAMPTP43490 491 aa13.42□□□□□ -0.26
CDK5RAP3-216ENST00000579853 YARSP54577 528 aaKnown RBP13.42□□□□□ -0.26
CDK5RAP3-216ENST00000579853 IRX6P78412 446 aaPredicted RBP13.42□□□□□ -0.26
CDK5RAP3-216ENST00000579853 SHC2P98077 582 aa13.42□□□□□ -0.26
CDK5RAP3-216ENST00000579853 SATB1Q01826 763 aa13.42□□□□□ -0.26
CDK5RAP3-216ENST00000579853 STK3Q13188 491 aa13.42□□□□□ -0.26
CDK5RAP3-216ENST00000579853 PTGDRQ13258 359 aa13.42□□□□□ -0.26
CDK5RAP3-216ENST00000579853 DGKKQ5KSL6 1271 aa13.42□□□□□ -0.26
CDK5RAP3-216ENST00000579853 VITQ6UXI7 678 aa13.42□□□□□ -0.26
CDK5RAP3-216ENST00000579853 CEP68Q76N32 757 aa13.42□□□□□ -0.26
CDK5RAP3-216ENST00000579853 MAEAQ7L5Y9 396 aa13.42□□□□□ -0.26
CDK5RAP3-216ENST00000579853 DEPTORQ8TB45 409 aa13.42□□□□□ -0.26
CDK5RAP3-216ENST00000579853 TCEAL4Q96EI5 215 aa13.42□□□□□ -0.26
CDK5RAP3-216ENST00000579853 NACC1Q96RE7 527 aa13.42□□□□□ -0.26
CDK5RAP3-216ENST00000579853 GPRC5CQ9NQ84 441 aa13.42□□□□□ -0.26
CDK5RAP3-216ENST00000579853 TICRRQ7Z2Z1 1910 aa13.42□□□□□ -0.26
CDK5RAP3-216ENST00000579853 DMXL2Q8TDJ6 3036 aa13.42□□□□□ -0.26
CDK5RAP3-216ENST00000579853 ITPR1Q14643 2758 aa13.41□□□□□ -0.26
CDK5RAP3-216ENST00000579853 TTLL13PA6NNM8 815 aa13.41□□□□□ -0.26
CDK5RAP3-216ENST00000579853 CHURC1-FNTBB4DL54 471 aa13.41□□□□□ -0.26
CDK5RAP3-216ENST00000579853 CHADO15335 359 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms