RNA–Protein interactions for RNA: ENST00000578297.1

LIMD2-204, Transcript of LIM domain containing 2, humanhuman

TSL 2

Gene LIMD2, Length 760 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2-204ENST00000578297 DERAQ9Y315 318 aa25.12■■□□□ 1.61
LIMD2-204ENST00000578297 HCFC2Q9Y5Z7 792 aa25.12■■□□□ 1.61
LIMD2-204ENST00000578297 KIAA0391O15091 583 aaKnown RBP25.11■■□□□ 1.61
LIMD2-204ENST00000578297 XPOTO43592 962 aaKnown RBP25.11■■□□□ 1.61
LIMD2-204ENST00000578297 TRAPPC3O43617 180 aa25.11■■□□□ 1.61
LIMD2-204ENST00000578297 BMT2Q1RMZ1 405 aa25.11■■□□□ 1.61
LIMD2-204ENST00000578297 FAM171A1Q5VUB5 890 aa25.11■■□□□ 1.61
LIMD2-204ENST00000578297 PTCRAQ6ISU1 281 aaPredicted RBP25.11■■□□□ 1.61
LIMD2-204ENST00000578297 KANK3Q6NY19 840 aa25.11■■□□□ 1.61
LIMD2-204ENST00000578297 LLGL2Q6P1M3 1020 aa25.11■■□□□ 1.61
LIMD2-204ENST00000578297 ARMCX5Q6P1M9 558 aa25.11■■□□□ 1.61
LIMD2-204ENST00000578297 CASP10Q92851 521 aa25.11■■□□□ 1.61
LIMD2-204ENST00000578297 CCDC34Q96HJ3 373 aa25.11■■□□□ 1.61
LIMD2-204ENST00000578297 CBWD1Q9BRT8 395 aa25.11■■□□□ 1.61
LIMD2-204ENST00000578297 FAM213AQ9BRX8 229 aa25.11■■□□□ 1.61
LIMD2-204ENST00000578297 TTPALQ9BTX7 342 aa25.11■■□□□ 1.61
LIMD2-204ENST00000578297 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP25.11■■□□□ 1.61
LIMD2-204ENST00000578297 CD207Q9UJ71 328 aa25.11■■□□□ 1.61
LIMD2-204ENST00000578297 GRXCR2A6NFK2 248 aa25.1■■□□□ 1.61
LIMD2-204ENST00000578297 RPN1P04843 607 aaKnown RBP25.1■■□□□ 1.61
LIMD2-204ENST00000578297 PRR29P0C7W0 189 aa25.1■■□□□ 1.61
LIMD2-204ENST00000578297 KLRC2P26717 231 aa25.1■■□□□ 1.61
LIMD2-204ENST00000578297 LRPAP1P30533 357 aa25.1■■□□□ 1.61
LIMD2-204ENST00000578297 DPYDQ12882 1025 aa25.1■■□□□ 1.61
LIMD2-204ENST00000578297 SNW1Q13573 536 aaKnown RBP25.1■■□□□ 1.61
LIMD2-204ENST00000578297 JADE1Q6IE81 842 aa25.1■■□□□ 1.61
LIMD2-204ENST00000578297 ENGASEQ8NFI3 743 aa25.1■■□□□ 1.61
LIMD2-204ENST00000578297 SLC22A17Q8WUG5 538 aa25.1■■□□□ 1.61
LIMD2-204ENST00000578297 SAAL1Q96ER3 474 aa25.1■■□□□ 1.61
LIMD2-204ENST00000578297 FNIP2Q9P278 1114 aa25.1■■□□□ 1.61
LIMD2-204ENST00000578297 ANK1P16157 1881 aa25.09■■□□□ 1.61
LIMD2-204ENST00000578297 TEX28O15482 410 aa25.09■■□□□ 1.61
LIMD2-204ENST00000578297 TGFB1I1O43294 461 aa25.09■■□□□ 1.61
LIMD2-204ENST00000578297 IL18RAPO95256 599 aa25.09■■□□□ 1.61
LIMD2-204ENST00000578297 SNRPFP62306 86 aaKnown RBP25.09■■□□□ 1.61
LIMD2-204ENST00000578297 CREMQ03060 361 aa25.09■■□□□ 1.61
LIMD2-204ENST00000578297 FAM160A1Q05DH4 1040 aa25.09■■□□□ 1.61
LIMD2-204ENST00000578297 STK4Q13043 487 aa25.09■■□□□ 1.61
LIMD2-204ENST00000578297 CLUL1Q15846 466 aa25.09■■□□□ 1.61
LIMD2-204ENST00000578297 RTP2Q5QGT7 225 aa25.09■■□□□ 1.61
LIMD2-204ENST00000578297 SPATA1Q5VX52 437 aa25.09■■□□□ 1.61
LIMD2-204ENST00000578297 ANKRD54Q6NXT1 300 aa25.09■■□□□ 1.61
LIMD2-204ENST00000578297 PDZRN4Q6ZMN7 1036 aaPredicted RBP25.09■■□□□ 1.61
LIMD2-204ENST00000578297 SMRP1Q8NCR6 262 aa25.09■■□□□ 1.61
LIMD2-204ENST00000578297 ZSWIM2Q8NEG5 633 aa25.09■■□□□ 1.61
LIMD2-204ENST00000578297 RIN2Q8WYP3 895 aaPredicted RBP25.09■■□□□ 1.61
LIMD2-204ENST00000578297 PCIF1Q9H4Z3 704 aa25.09■■□□□ 1.61
LIMD2-204ENST00000578297 C2CD2Q9Y426 696 aa25.09■■□□□ 1.61
LIMD2-204ENST00000578297 EXTL3O43909 919 aa25.08■■□□□ 1.61
LIMD2-204ENST00000578297 ADH1AP07327 375 aa25.08■■□□□ 1.61
LIMD2-204ENST00000578297 FGFR3P22607 806 aa25.08■■□□□ 1.61
LIMD2-204ENST00000578297 CLCN4P51793 760 aa25.08■■□□□ 1.61
LIMD2-204ENST00000578297 SMAD4Q13485 552 aaKnown RBP25.08■■□□□ 1.61
LIMD2-204ENST00000578297 TMEM132DQ14C87 1099 aa25.08■■□□□ 1.61
LIMD2-204ENST00000578297 PDXDC1Q6P996 788 aa25.08■■□□□ 1.61
LIMD2-204ENST00000578297 CEP57Q86XR8 500 aa25.08■■□□□ 1.61
LIMD2-204ENST00000578297 BRSK2Q8IWQ3 736 aa25.08■■□□□ 1.61
LIMD2-204ENST00000578297 NELFCDQ8IXH7 590 aa25.08■■□□□ 1.61
LIMD2-204ENST00000578297 KIAA0895Q8NCT3 520 aa25.08■■□□□ 1.61
LIMD2-204ENST00000578297 BEST2Q8NFU1 509 aa25.08■■□□□ 1.61
LIMD2-204ENST00000578297 PIK3R5Q8WYR1 880 aa25.08■■□□□ 1.61
LIMD2-204ENST00000578297 FAM50BQ9Y247 325 aa25.08■■□□□ 1.61
LIMD2-204ENST00000578297 MBTPS2O43462 519 aa25.07■■□□□ 1.6
LIMD2-204ENST00000578297 RHOBTB3O94955 611 aa25.07■■□□□ 1.6
LIMD2-204ENST00000578297 NFICP08651 508 aa25.07■■□□□ 1.6
LIMD2-204ENST00000578297 EPCAMP16422 314 aa25.07■■□□□ 1.6
LIMD2-204ENST00000578297 HOXB8P17481 243 aaPredicted RBP25.07■■□□□ 1.6
LIMD2-204ENST00000578297 BRCC3P46736 316 aa25.07■■□□□ 1.6
LIMD2-204ENST00000578297 KNOP1Q1ED39 458 aaKnown RBP25.07■■□□□ 1.6
LIMD2-204ENST00000578297 NT5DC4Q86YG4 428 aa25.07■■□□□ 1.6
LIMD2-204ENST00000578297 GPD1LQ8N335 351 aa25.07■■□□□ 1.6
LIMD2-204ENST00000578297 LNX1Q8TBB1 728 aaPredicted RBP25.07■■□□□ 1.6
LIMD2-204ENST00000578297 ADAMTS19Q8TE59 1207 aa25.07■■□□□ 1.6
LIMD2-204ENST00000578297 CCDC47Q96A33 483 aaKnown RBP25.07■■□□□ 1.6
LIMD2-204ENST00000578297 COL25A1Q9BXS0 654 aaPredicted RBP25.07■■□□□ 1.6
LIMD2-204ENST00000578297 AGPAT3Q9NRZ7 376 aa25.07■■□□□ 1.6
LIMD2-204ENST00000578297 CGNQ9P2M7 1197 aaKnown RBP25.07■■□□□ 1.6
LIMD2-204ENST00000578297 NUB1Q9Y5A7 615 aa25.07■■□□□ 1.6
LIMD2-204ENST00000578297 TCF20Q9UGU0 1960 aaKnown RBP25.07■■□□□ 1.6
LIMD2-204ENST00000578297 VWA8A3KMH1 1905 aa25.06■■□□□ 1.6
LIMD2-204ENST00000578297 GOLGA8IPA6NC78 632 aa25.06■■□□□ 1.6
LIMD2-204ENST00000578297 GOLGA8JA6NMD2 632 aa25.06■■□□□ 1.6
LIMD2-204ENST00000578297 C1RP00736 705 aa25.06■■□□□ 1.6
LIMD2-204ENST00000578297 SYCE2Q6PIF2 218 aa25.06■■□□□ 1.6
LIMD2-204ENST00000578297 PRSS55Q6UWB4 352 aaPredicted RBP25.06■■□□□ 1.6
LIMD2-204ENST00000578297 HS2ST1Q7LGA3 356 aa25.06■■□□□ 1.6
LIMD2-204ENST00000578297 S1PR5Q9H228 398 aa25.06■■□□□ 1.6
LIMD2-204ENST00000578297 DZANK1Q9NVP4 752 aa25.06■■□□□ 1.6
LIMD2-204ENST00000578297 RBAKQ9NYW8 714 aaPredicted RBP25.06■■□□□ 1.6
LIMD2-204ENST00000578297 HSPBP1Q9NZL4 362 aa25.06■■□□□ 1.6
LIMD2-204ENST00000578297 IL9P15248 144 aa25.05■■□□□ 1.6
LIMD2-204ENST00000578297 KCNB1Q14721 858 aa25.05■■□□□ 1.6
LIMD2-204ENST00000578297 SMAD2Q15796 467 aaKnown RBP25.05■■□□□ 1.6
LIMD2-204ENST00000578297 TMEM130Q8N3G9 435 aa25.05■■□□□ 1.6
LIMD2-204ENST00000578297 SUSD3Q96L08 255 aa25.05■■□□□ 1.6
LIMD2-204ENST00000578297 TIGD1Q96MW7 591 aa25.05■■□□□ 1.6
LIMD2-204ENST00000578297 KIAA1586Q9HCI6 787 aa25.05■■□□□ 1.6
LIMD2-204ENST00000578297 I3L4J1 428 aa25.04■■□□□ 1.6
LIMD2-204ENST00000578297 SYN3O14994 580 aa25.04■■□□□ 1.6
LIMD2-204ENST00000578297 TKTP29401 623 aaKnown RBP25.04■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms