RNA–Protein interactions for RNA: ENST00000577646.5

RARA-208, Transcript of retinoic acid receptor alpha, humanhuman

TSL 5

Gene RARA, Length 733 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RARA-208ENST00000577646 BIN1O00499 593 aa13.4□□□□□ -0.26
RARA-208ENST00000577646 MEFVO15553 781 aaPredicted RBP13.4□□□□□ -0.26
RARA-208ENST00000577646 STX10O60499 249 aa13.4□□□□□ -0.26
RARA-208ENST00000577646 TADA2AO75478 443 aa13.4□□□□□ -0.26
RARA-208ENST00000577646 ARHGEF15O94989 841 aa13.4□□□□□ -0.26
RARA-208ENST00000577646 EFEMP2O95967 443 aa13.4□□□□□ -0.26
RARA-208ENST00000577646 ITGB1P05556 798 aa13.4□□□□□ -0.26
RARA-208ENST00000577646 KRT13P13646 458 aa13.4□□□□□ -0.26
RARA-208ENST00000577646 PNPLA4P41247 253 aa13.4□□□□□ -0.26
RARA-208ENST00000577646 CYP24A1Q07973 514 aa13.4□□□□□ -0.26
RARA-208ENST00000577646 CCDC85BQ15834 202 aaPredicted RBP13.4□□□□□ -0.26
RARA-208ENST00000577646 ZBTB41Q5SVQ8 909 aa13.4□□□□□ -0.26
RARA-208ENST00000577646 ANKRD40Q6AI12 368 aa13.4□□□□□ -0.26
RARA-208ENST00000577646 JADE1Q6IE81 842 aa13.4□□□□□ -0.26
RARA-208ENST00000577646 FILIP1Q7Z7B0 1213 aa13.4□□□□□ -0.26
RARA-208ENST00000577646 CBWD2Q8IUF1 395 aa13.4□□□□□ -0.26
RARA-208ENST00000577646 SMYD4Q8IYR2 804 aaPredicted RBP13.4□□□□□ -0.26
RARA-208ENST00000577646 MICALL1Q8N3F8 863 aa13.4□□□□□ -0.26
RARA-208ENST00000577646 MRPL38Q96DV4 380 aaKnown RBP13.4□□□□□ -0.26
RARA-208ENST00000577646 FAM212AQ96EL1 285 aa13.4□□□□□ -0.26
RARA-208ENST00000577646 ANKRD36BP1Q96IX9 119 aa13.4□□□□□ -0.26
RARA-208ENST00000577646 INTS13Q9NVM9 706 aa13.4□□□□□ -0.26
RARA-208ENST00000577646 ANO10Q9NW15 660 aa13.4□□□□□ -0.26
RARA-208ENST00000577646 ADAM28Q9UKQ2 775 aa13.4□□□□□ -0.26
RARA-208ENST00000577646 ITGA11Q9UKX5 1188 aa13.4□□□□□ -0.26
RARA-208ENST00000577646 R3HCC1Q9Y3T6 440 aaKnown RBP13.4□□□□□ -0.26
RARA-208ENST00000577646 IRAK3Q9Y616 596 aa13.4□□□□□ -0.26
RARA-208ENST00000577646 TDRD15B5MCY1 1934 aaKnown RBP13.4□□□□□ -0.26
RARA-208ENST00000577646 SF3B1O75533 1304 aaKnown RBP eCLIP13.39□□□□□ -0.279e-6■■■■■ 68.9
RARA-208ENST00000577646 GOLGA8IPA6NC78 632 aa13.39□□□□□ -0.27
RARA-208ENST00000577646 GOLGA8JA6NMD2 632 aa13.39□□□□□ -0.27
RARA-208ENST00000577646 NCK2O43639 380 aa13.39□□□□□ -0.27
RARA-208ENST00000577646 TNNC2P02585 160 aa13.39□□□□□ -0.27
RARA-208ENST00000577646 EPB41P11171 864 aaKnown RBP13.39□□□□□ -0.27
RARA-208ENST00000577646 GTF2H1P32780 548 aa13.39□□□□□ -0.27
RARA-208ENST00000577646 CREMQ03060 361 aa13.39□□□□□ -0.27
RARA-208ENST00000577646 ISM2Q6H9L7 571 aa13.39□□□□□ -0.27
RARA-208ENST00000577646 LRRC52Q8N7C0 313 aa13.39□□□□□ -0.27
RARA-208ENST00000577646 PARD3BQ8TEW8 1205 aa13.39□□□□□ -0.27
RARA-208ENST00000577646 NELFBQ8WX92 580 aa13.39□□□□□ -0.27
RARA-208ENST00000577646 OXCT2Q9BYC2 517 aaPredicted RBP13.39□□□□□ -0.27
RARA-208ENST00000577646 DPP3Q9NY33 737 aa13.39□□□□□ -0.27
RARA-208ENST00000577646 MTUS1Q9ULD2 1270 aa13.39□□□□□ -0.27
RARA-208ENST00000577646 TTC28Q96AY4 2481 aa13.38□□□□□ -0.27
RARA-208ENST00000577646 NLRC5Q86WI3 1866 aa13.38□□□□□ -0.27
RARA-208ENST00000577646 ANO9A1A5B4 782 aa13.38□□□□□ -0.27
RARA-208ENST00000577646 RFXAPO00287 272 aa13.38□□□□□ -0.27
RARA-208ENST00000577646 PODXLO00592 558 aa13.38□□□□□ -0.27
RARA-208ENST00000577646 PIRO00625 290 aa13.38□□□□□ -0.27
RARA-208ENST00000577646 LPXNO60711 386 aa13.38□□□□□ -0.27
RARA-208ENST00000577646 B3GAT3O94766 335 aa13.38□□□□□ -0.27
RARA-208ENST00000577646 SOD2P04179 222 aa13.38□□□□□ -0.27
RARA-208ENST00000577646 TMEM191BP0C7N4 346 aa13.38□□□□□ -0.27
RARA-208ENST00000577646 CD44P16070 742 aaKnown RBP13.38□□□□□ -0.27
RARA-208ENST00000577646 TNNI1P19237 187 aa13.38□□□□□ -0.27
RARA-208ENST00000577646 CLCNKBP51801 687 aa13.38□□□□□ -0.27
RARA-208ENST00000577646 RBP5P82980 135 aa13.38□□□□□ -0.27
RARA-208ENST00000577646 USP41Q3LFD5 358 aa13.38□□□□□ -0.27
RARA-208ENST00000577646 TIGD5Q53EQ6 642 aa13.38□□□□□ -0.27
RARA-208ENST00000577646 GLRA4Q5JXX5 417 aa13.38□□□□□ -0.27
RARA-208ENST00000577646 CEP135Q66GS9 1140 aa13.38□□□□□ -0.27
RARA-208ENST00000577646 TTI2Q6NXR4 508 aa13.38□□□□□ -0.27
RARA-208ENST00000577646 FRMD5Q7Z6J6 570 aa13.38□□□□□ -0.27
RARA-208ENST00000577646 FAM186BQ8IYM0 893 aa13.38□□□□□ -0.27
RARA-208ENST00000577646 RNF168Q8IYW5 571 aaPredicted RBP13.38□□□□□ -0.27
RARA-208ENST00000577646 RDH13Q8NBN7 331 aa13.38□□□□□ -0.27
RARA-208ENST00000577646 NOC3LQ8WTT2 800 aaKnown RBP13.38□□□□□ -0.27
RARA-208ENST00000577646 POF1BQ8WVV4 589 aa13.38□□□□□ -0.27
RARA-208ENST00000577646 ZNF560Q96MR9 790 aa13.38□□□□□ -0.27
RARA-208ENST00000577646 CGRRF1Q99675 332 aa13.38□□□□□ -0.27
RARA-208ENST00000577646 NAT10Q9H0A0 1025 aaKnown RBP13.38□□□□□ -0.27
RARA-208ENST00000577646 PDE11AQ9HCR9 933 aa13.38□□□□□ -0.27
RARA-208ENST00000577646 PRDM6Q9NQX0 595 aa13.38□□□□□ -0.27
RARA-208ENST00000577646 TLR9Q9NR96 1032 aa13.38□□□□□ -0.27
RARA-208ENST00000577646 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP13.38□□□□□ -0.27
RARA-208ENST00000577646 CHST7Q9NS84 486 aa13.38□□□□□ -0.27
RARA-208ENST00000577646 CASTOR2A6NHX0 329 aa13.37□□□□□ -0.27
RARA-208ENST00000577646 SYN3O14994 580 aa13.37□□□□□ -0.27
RARA-208ENST00000577646 GRM6O15303 877 aa13.37□□□□□ -0.27
RARA-208ENST00000577646 B4GALT3O60512 393 aa13.37□□□□□ -0.27
RARA-208ENST00000577646 AKAP3O75969 853 aa13.37□□□□□ -0.27
RARA-208ENST00000577646 CAVIN2O95810 425 aa13.37□□□□□ -0.27
RARA-208ENST00000577646 NFICP08651 508 aa13.37□□□□□ -0.27
RARA-208ENST00000577646 FAM163BP0C2L3 166 aa13.37□□□□□ -0.27
RARA-208ENST00000577646 CTSAP10619 480 aa13.37□□□□□ -0.27
RARA-208ENST00000577646 ATICP31939 592 aa13.37□□□□□ -0.27
RARA-208ENST00000577646 AARSP49588 968 aaKnown RBP eCLIP13.37□□□□□ -0.27
RARA-208ENST00000577646 VAMP7P51809 220 aa13.37□□□□□ -0.27
RARA-208ENST00000577646 MARSP56192 900 aaKnown RBP13.37□□□□□ -0.27
RARA-208ENST00000577646 TFAMQ00059 246 aaKnown RBP13.37□□□□□ -0.27
RARA-208ENST00000577646 SOX4Q06945 474 aaPredicted RBP13.37□□□□□ -0.27
RARA-208ENST00000577646 SMC1AQ14683 1233 aaKnown RBP13.37□□□□□ -0.27
RARA-208ENST00000577646 SKIV2LQ15477 1246 aaKnown RBP13.37□□□□□ -0.27
RARA-208ENST00000577646 STX1AQ16623 288 aa13.37□□□□□ -0.27
RARA-208ENST00000577646 C9orf57Q5W0N0 161 aa13.37□□□□□ -0.27
RARA-208ENST00000577646 FUT10Q6P4F1 479 aa13.37□□□□□ -0.27
RARA-208ENST00000577646 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.37□□□□□ -0.27
RARA-208ENST00000577646 VPS52Q8N1B4 723 aa13.37□□□□□ -0.27
RARA-208ENST00000577646 CSGALNACT2Q8N6G5 542 aa13.37□□□□□ -0.27
RARA-208ENST00000577646 ZSWIM2Q8NEG5 633 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms