RNA–Protein interactions for RNA: ENST00000577636.5

SS18-207, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 3

Gene SS18, Length 580 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-207ENST00000577636 IQCDQ96DY2 449 aa11.06□□□□□ -0.64
SS18-207ENST00000577636 CEP170P1Q96L14 293 aa11.06□□□□□ -0.64
SS18-207ENST00000577636 PCMTD1Q96MG8 357 aaPredicted RBP11.06□□□□□ -0.64
SS18-207ENST00000577636 ZNF830Q96NB3 372 aaPredicted RBP11.06□□□□□ -0.64
SS18-207ENST00000577636 ZBP1Q9H171 429 aa11.06□□□□□ -0.64
SS18-207ENST00000577636 NRBP2Q9NSY0 501 aa11.06□□□□□ -0.64
SS18-207ENST00000577636 MAFBQ9Y5Q3 323 aaPredicted RBP11.06□□□□□ -0.64
SS18-207ENST00000577636 A0A1W2PQC6 194 aa11.05□□□□□ -0.64
SS18-207ENST00000577636 LGALS16A8MUM7 142 aa11.05□□□□□ -0.64
SS18-207ENST00000577636 AKR1B15C9JRZ8 316 aaPredicted RBP11.05□□□□□ -0.64
SS18-207ENST00000577636 H0YCG3 227 aa11.05□□□□□ -0.64
SS18-207ENST00000577636 ZBTB39O15060 712 aa11.05□□□□□ -0.64
SS18-207ENST00000577636 ZNF500O60304 480 aaPredicted RBP11.05□□□□□ -0.64
SS18-207ENST00000577636 HIP1RO75146 1068 aa11.05□□□□□ -0.64
SS18-207ENST00000577636 CTSAP10619 480 aa11.05□□□□□ -0.64
SS18-207ENST00000577636 MAPTP10636 758 aaKnown RBP11.05□□□□□ -0.64
SS18-207ENST00000577636 SKILP12757 684 aa11.05□□□□□ -0.64
SS18-207ENST00000577636 PLS3P13797 630 aa11.05□□□□□ -0.64
SS18-207ENST00000577636 DARSP14868 501 aaKnown RBP11.05□□□□□ -0.64
SS18-207ENST00000577636 NPR3P17342 541 aa11.05□□□□□ -0.64
SS18-207ENST00000577636 GPC3P51654 580 aa11.05□□□□□ -0.64
SS18-207ENST00000577636 ZNF131P52739 623 aa11.05□□□□□ -0.64
SS18-207ENST00000577636 PPP2R3AQ06190 1150 aa11.05□□□□□ -0.64
SS18-207ENST00000577636 TDGQ13569 410 aa11.05□□□□□ -0.64
SS18-207ENST00000577636 BMT2Q1RMZ1 405 aa11.05□□□□□ -0.64
SS18-207ENST00000577636 TWF2Q6IBS0 349 aaKnown RBP11.05□□□□□ -0.64
SS18-207ENST00000577636 CCDC149Q6ZUS6 474 aa11.05□□□□□ -0.64
SS18-207ENST00000577636 CNGA4Q8IV77 575 aa11.05□□□□□ -0.64
SS18-207ENST00000577636 EXOC8Q8IYI6 725 aa11.05□□□□□ -0.64
SS18-207ENST00000577636 SYCP3Q8IZU3 236 aa11.05□□□□□ -0.64
SS18-207ENST00000577636 DTWD2Q8NBA8 298 aa11.05□□□□□ -0.64
SS18-207ENST00000577636 MCPH1Q8NEM0 835 aa11.05□□□□□ -0.64
SS18-207ENST00000577636 ZNF507Q8TCN5 953 aa11.05□□□□□ -0.64
SS18-207ENST00000577636 SLC22A17Q8WUG5 538 aa11.05□□□□□ -0.64
SS18-207ENST00000577636 SCFD1Q8WVM8 642 aa11.05□□□□□ -0.64
SS18-207ENST00000577636 RIN2Q8WYP3 895 aaPredicted RBP11.05□□□□□ -0.64
SS18-207ENST00000577636 KIFAP3Q92845 792 aa11.05□□□□□ -0.64
SS18-207ENST00000577636 HINFPQ9BQA5 517 aa11.05□□□□□ -0.64
SS18-207ENST00000577636 MRPL9Q9BYD2 267 aaKnown RBP11.05□□□□□ -0.64
SS18-207ENST00000577636 NRDE2Q9H7Z3 1164 aa11.05□□□□□ -0.64
SS18-207ENST00000577636 TMEM206Q9H813 350 aa11.05□□□□□ -0.64
SS18-207ENST00000577636 WRAP73Q9P2S5 460 aaPredicted RBP11.05□□□□□ -0.64
SS18-207ENST00000577636 SEPT9Q9UHD8 586 aaPredicted RBP11.05□□□□□ -0.64
SS18-207ENST00000577636 MYO15AQ9UKN7 3530 aa11.05□□□□□ -0.64
SS18-207ENST00000577636 EXOC7Q9UPT5 735 aa11.05□□□□□ -0.64
SS18-207ENST00000577636 USTQ9Y2C2 406 aa11.05□□□□□ -0.64
SS18-207ENST00000577636 ITIH6Q6UXX5 1313 aa11.05□□□□□ -0.64
SS18-207ENST00000577636 CACNA1HO95180 2353 aa11.04□□□□□ -0.64
SS18-207ENST00000577636 SFI1A8K8P3 1242 aa11.04□□□□□ -0.64
SS18-207ENST00000577636 K7ENM7 598 aa11.04□□□□□ -0.64
SS18-207ENST00000577636 CCP110O43303 1012 aa11.04□□□□□ -0.64
SS18-207ENST00000577636 NARSO43776 548 aaKnown RBP11.04□□□□□ -0.64
SS18-207ENST00000577636 DGAT1O75907 488 aa11.04□□□□□ -0.64
SS18-207ENST00000577636 OATP04181 439 aa11.04□□□□□ -0.64
SS18-207ENST00000577636 GALTP07902 379 aa11.04□□□□□ -0.64
SS18-207ENST00000577636 CFHP08603 1231 aa11.04□□□□□ -0.64
SS18-207ENST00000577636 AOC1P19801 751 aa11.04□□□□□ -0.64
SS18-207ENST00000577636 SCP2P22307 547 aa11.04□□□□□ -0.64
SS18-207ENST00000577636 PRKCEQ02156 737 aa11.04□□□□□ -0.64
SS18-207ENST00000577636 TBC1D8BQ0IIM8 1120 aa11.04□□□□□ -0.64
SS18-207ENST00000577636 ADAM9Q13443 819 aa11.04□□□□□ -0.64
SS18-207ENST00000577636 MAN2A1Q16706 1144 aa11.04□□□□□ -0.64
SS18-207ENST00000577636 UGCGQ16739 394 aa11.04□□□□□ -0.64
SS18-207ENST00000577636 EPM2AIP1Q7L775 607 aaPredicted RBP11.04□□□□□ -0.64
SS18-207ENST00000577636 OTOP3Q7RTS5 596 aa11.04□□□□□ -0.64
SS18-207ENST00000577636 DDX53Q86TM3 631 aaKnown RBP11.04□□□□□ -0.64
SS18-207ENST00000577636 ZNF598Q86UK7 904 aaKnown RBP11.04□□□□□ -0.64
SS18-207ENST00000577636 CACTINQ8WUQ7 758 aaKnown RBP11.04□□□□□ -0.64
SS18-207ENST00000577636 RSAD2Q8WXG1 361 aa11.04□□□□□ -0.64
SS18-207ENST00000577636 CCDC51Q96ER9 411 aa11.04□□□□□ -0.64
SS18-207ENST00000577636 IGSF21Q96ID5 467 aa11.04□□□□□ -0.64
SS18-207ENST00000577636 FAM167AQ96KS9 214 aa11.04□□□□□ -0.64
SS18-207ENST00000577636 IFT74Q96LB3 600 aa11.04□□□□□ -0.64
SS18-207ENST00000577636 RTP3Q9BQQ7 232 aa11.04□□□□□ -0.64
SS18-207ENST00000577636 NUP58Q9BVL2 599 aa11.04□□□□□ -0.64
SS18-207ENST00000577636 GCOM2Q9BZD3 368 aaPredicted RBP11.04□□□□□ -0.64
SS18-207ENST00000577636 C17orf75Q9HAS0 396 aa11.04□□□□□ -0.64
SS18-207ENST00000577636 KCNK12Q9HB15 430 aa11.04□□□□□ -0.64
SS18-207ENST00000577636 METTL14Q9HCE5 456 aaKnown RBP11.04□□□□□ -0.64
SS18-207ENST00000577636 CGNQ9P2M7 1197 aaKnown RBP11.04□□□□□ -0.64
SS18-207ENST00000577636 TRAF3IP3Q9Y228 551 aa11.04□□□□□ -0.64
SS18-207ENST00000577636 PPME1Q9Y570 386 aa11.04□□□□□ -0.64
SS18-207ENST00000577636 A0A087WZ62 844 aa11.03□□□□□ -0.64
SS18-207ENST00000577636 C2CD2LO14523 706 aa11.03□□□□□ -0.64
SS18-207ENST00000577636 SLC16A3O15427 465 aaKnown RBP11.03□□□□□ -0.64
SS18-207ENST00000577636 ZNF862O60290 1169 aa11.03□□□□□ -0.64
SS18-207ENST00000577636 PRPF6O94906 941 aaKnown RBP11.03□□□□□ -0.64
SS18-207ENST00000577636 NR2F2P24468 414 aa11.03□□□□□ -0.64
SS18-207ENST00000577636 GBP2P32456 591 aaPredicted RBP11.03□□□□□ -0.64
SS18-207ENST00000577636 CLCN1P35523 988 aa11.03□□□□□ -0.64
SS18-207ENST00000577636 RFC5P40937 340 aa11.03□□□□□ -0.64
SS18-207ENST00000577636 PHKA2P46019 1235 aa11.03□□□□□ -0.64
SS18-207ENST00000577636 POLGP54098 1239 aaPredicted RBP11.03□□□□□ -0.64
SS18-207ENST00000577636 SNRPFP62306 86 aaKnown RBP11.03□□□□□ -0.64
SS18-207ENST00000577636 DMP1Q13316 513 aaPredicted RBP11.03□□□□□ -0.64
SS18-207ENST00000577636 DRP2Q13474 957 aa11.03□□□□□ -0.64
SS18-207ENST00000577636 HSP90AA2PQ14568 343 aaPredicted RBP11.03□□□□□ -0.64
SS18-207ENST00000577636 MTERF2Q49AM1 385 aa11.03□□□□□ -0.64
SS18-207ENST00000577636 VWA3BQ502W6 1294 aa11.03□□□□□ -0.64
SS18-207ENST00000577636 ZCWPW2Q504Y3 356 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms