RNA–Protein interactions for RNA: ENST00000573716.1

PRPF8-208, Transcript of pre-mRNA processing factor 8, humanhuman

TSL 2

Gene PRPF8, Length 542 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8-208ENST00000573716 PSMA5P28066 241 aa13.44□□□□□ -0.26
PRPF8-208ENST00000573716 CLCNKBP51801 687 aa13.44□□□□□ -0.26
PRPF8-208ENST00000573716 ROR1Q01973 937 aa13.44□□□□□ -0.26
PRPF8-208ENST00000573716 SPIRE1Q08AE8 756 aa13.44□□□□□ -0.26
PRPF8-208ENST00000573716 SF3A2Q15428 464 aaKnown RBP13.44□□□□□ -0.26
PRPF8-208ENST00000573716 NAB2Q15742 525 aa13.44□□□□□ -0.26
PRPF8-208ENST00000573716 CYP4A22Q5TCH4 519 aa13.44□□□□□ -0.26
PRPF8-208ENST00000573716 RTL10Q7L3V2 364 aa13.44□□□□□ -0.26
PRPF8-208ENST00000573716 ELMOD1Q8N336 334 aa13.44□□□□□ -0.26
PRPF8-208ENST00000573716 FAM160A2Q8N612 972 aaPredicted RBP13.44□□□□□ -0.26
PRPF8-208ENST00000573716 C12orf50Q8NA57 414 aaPredicted RBP13.44□□□□□ -0.26
PRPF8-208ENST00000573716 CSGALNACT1Q8TDX6 532 aa13.44□□□□□ -0.26
PRPF8-208ENST00000573716 SMARCD2Q92925 531 aa13.44□□□□□ -0.26
PRPF8-208ENST00000573716 PRIMPOLQ96LW4 560 aa13.44□□□□□ -0.26
PRPF8-208ENST00000573716 ZSWIM3Q96MP5 696 aa13.44□□□□□ -0.26
PRPF8-208ENST00000573716 ASB16Q96NS5 453 aa13.44□□□□□ -0.26
PRPF8-208ENST00000573716 NAP1L4Q99733 375 aaKnown RBP13.44□□□□□ -0.26
PRPF8-208ENST00000573716 AGXT2Q9BYV1 514 aa13.44□□□□□ -0.26
PRPF8-208ENST00000573716 SLITRK6Q9H5Y7 841 aa13.44□□□□□ -0.26
PRPF8-208ENST00000573716 GOLGA2P5Q9HBQ8 144 aa13.44□□□□□ -0.26
PRPF8-208ENST00000573716 AVENQ9NQS1 362 aaPredicted RBP13.44□□□□□ -0.26
PRPF8-208ENST00000573716 BACE2Q9Y5Z0 518 aa13.44□□□□□ -0.26
PRPF8-208ENST00000573716 CEP295Q9C0D2 2601 aa13.43□□□□□ -0.26
PRPF8-208ENST00000573716 ARHGEF37A1IGU5 675 aa13.43□□□□□ -0.26
PRPF8-208ENST00000573716 AXIN1O15169 862 aa13.43□□□□□ -0.26
PRPF8-208ENST00000573716 DTNBO60941 627 aa13.43□□□□□ -0.26
PRPF8-208ENST00000573716 CHRNB1P11230 501 aa13.43□□□□□ -0.26
PRPF8-208ENST00000573716 GJA1P17302 382 aa13.43□□□□□ -0.26
PRPF8-208ENST00000573716 CCR2P41597 374 aa13.43□□□□□ -0.26
PRPF8-208ENST00000573716 ATRXP46100 2492 aa13.43□□□□□ -0.26
PRPF8-208ENST00000573716 RARRES1P49788 294 aa13.43□□□□□ -0.26
PRPF8-208ENST00000573716 KPNA1P52294 538 aaPredicted RBP13.43□□□□□ -0.26
PRPF8-208ENST00000573716 COL9A2Q14055 689 aaPredicted RBP13.43□□□□□ -0.26
PRPF8-208ENST00000573716 LRRC32Q14392 662 aa13.43□□□□□ -0.26
PRPF8-208ENST00000573716 GAS6Q14393 721 aa13.43□□□□□ -0.26
PRPF8-208ENST00000573716 PRSS36Q5K4E3 855 aa13.43□□□□□ -0.26
PRPF8-208ENST00000573716 EEF1DP3Q658K8 133 aa13.43□□□□□ -0.26
PRPF8-208ENST00000573716 MAMSTRQ6ZN01 415 aa13.43□□□□□ -0.26
PRPF8-208ENST00000573716 Q6ZS52 159 aa13.43□□□□□ -0.26
PRPF8-208ENST00000573716 LONP2Q86WA8 852 aa13.43□□□□□ -0.26
PRPF8-208ENST00000573716 MAP4K3Q8IVH8 894 aa13.43□□□□□ -0.26
PRPF8-208ENST00000573716 YAF2Q8IY57 180 aa13.43□□□□□ -0.26
PRPF8-208ENST00000573716 HS6ST3Q8IZP7 471 aa13.43□□□□□ -0.26
PRPF8-208ENST00000573716 FBXL16Q8N461 479 aa13.43□□□□□ -0.26
PRPF8-208ENST00000573716 SPEM1Q8N4L4 309 aa13.43□□□□□ -0.26
PRPF8-208ENST00000573716 ZNF461Q8TAF7 563 aa13.43□□□□□ -0.26
PRPF8-208ENST00000573716 TTC8Q8TAM2 541 aa13.43□□□□□ -0.26
PRPF8-208ENST00000573716 FAM200AQ8TCP9 573 aa13.43□□□□□ -0.26
PRPF8-208ENST00000573716 OXER1Q8TDS5 423 aa13.43□□□□□ -0.26
PRPF8-208ENST00000573716 KCNB2Q92953 911 aa13.43□□□□□ -0.26
PRPF8-208ENST00000573716 GJB4Q9NTQ9 266 aa13.43□□□□□ -0.26
PRPF8-208ENST00000573716 FAM208BQ5VWN6 2430 aa13.43□□□□□ -0.26
PRPF8-208ENST00000573716 GREB1Q4ZG55 1949 aa13.43□□□□□ -0.26
PRPF8-208ENST00000573716 FAM205CA6NFA0 338 aa13.42□□□□□ -0.26
PRPF8-208ENST00000573716 SLC38A8A6NNN8 435 aa13.42□□□□□ -0.26
PRPF8-208ENST00000573716 FOXD2O60548 495 aaPredicted RBP13.42□□□□□ -0.26
PRPF8-208ENST00000573716 SEC24AO95486 1093 aa13.42□□□□□ -0.26
PRPF8-208ENST00000573716 ATP2B1P20020 1258 aa13.42□□□□□ -0.26
PRPF8-208ENST00000573716 PMLP29590 882 aa13.42□□□□□ -0.26
PRPF8-208ENST00000573716 HSPA4P34932 840 aa13.42□□□□□ -0.26
PRPF8-208ENST00000573716 CNR2P34972 360 aa13.42□□□□□ -0.26
PRPF8-208ENST00000573716 SOX9P48436 509 aa13.42□□□□□ -0.26
PRPF8-208ENST00000573716 TOB2Q14106 344 aaPredicted RBP13.42□□□□□ -0.26
PRPF8-208ENST00000573716 MAPK6Q16659 721 aa13.42□□□□□ -0.26
PRPF8-208ENST00000573716 IQCEQ6IPM2 695 aa13.42□□□□□ -0.26
PRPF8-208ENST00000573716 GPIHBP1Q8IV16 184 aa13.42□□□□□ -0.26
PRPF8-208ENST00000573716 C3orf58Q8NDZ4 430 aa13.42□□□□□ -0.26
PRPF8-208ENST00000573716 ZSCAN18Q8TBC5 510 aaPredicted RBP13.42□□□□□ -0.26
PRPF8-208ENST00000573716 DEPDC1BQ8WUY9 529 aa13.42□□□□□ -0.26
PRPF8-208ENST00000573716 ZNF512Q96ME7 567 aaPredicted RBP13.42□□□□□ -0.26
PRPF8-208ENST00000573716 ARRDC1-AS1Q9H2J1 176 aa13.42□□□□□ -0.26
PRPF8-208ENST00000573716 FZD8Q9H461 694 aa13.42□□□□□ -0.26
PRPF8-208ENST00000573716 SH2B1Q9NRF2 756 aaPredicted RBP13.42□□□□□ -0.26
PRPF8-208ENST00000573716 PCDHA12Q9UN75 941 aa13.42□□□□□ -0.26
PRPF8-208ENST00000573716 INSL5Q9Y5Q6 135 aa13.42□□□□□ -0.26
PRPF8-208ENST00000573716 HEPACAM2A8MVW5 462 aa13.41□□□□□ -0.26
PRPF8-208ENST00000573716 TMEM189-UBE2V1I3L0A0 370 aa13.41□□□□□ -0.26
PRPF8-208ENST00000573716 LYPLA2O95372 231 aa13.41□□□□□ -0.26
PRPF8-208ENST00000573716 XBP1P17861 261 aa13.41□□□□□ -0.26
PRPF8-208ENST00000573716 HOXC13P31276 330 aa13.41□□□□□ -0.26
PRPF8-208ENST00000573716 TXKP42681 527 aa13.41□□□□□ -0.26
PRPF8-208ENST00000573716 RBM25P49756 843 aaKnown RBP13.41□□□□□ -0.26
PRPF8-208ENST00000573716 EVCP57679 992 aa13.41□□□□□ -0.26
PRPF8-208ENST00000573716 PTGDRQ13258 359 aa13.41□□□□□ -0.26
PRPF8-208ENST00000573716 CALCRLQ16602 461 aa13.41□□□□□ -0.26
PRPF8-208ENST00000573716 UPP1Q16831 310 aa13.41□□□□□ -0.26
PRPF8-208ENST00000573716 FAM187BQ17R55 369 aa13.41□□□□□ -0.26
PRPF8-208ENST00000573716 EARS2Q5JPH6 523 aaKnown RBP13.41□□□□□ -0.26
PRPF8-208ENST00000573716 CDCA2Q69YH5 1023 aaPredicted RBP13.41□□□□□ -0.26
PRPF8-208ENST00000573716 TCEAL8Q8IYN2 117 aa13.41□□□□□ -0.26
PRPF8-208ENST00000573716 FAM177A1Q8N128 213 aaPredicted RBP13.41□□□□□ -0.26
PRPF8-208ENST00000573716 MCPH1Q8NEM0 835 aa13.41□□□□□ -0.26
PRPF8-208ENST00000573716 DEPTORQ8TB45 409 aa13.41□□□□□ -0.26
PRPF8-208ENST00000573716 UROC1Q96N76 676 aa13.41□□□□□ -0.26
PRPF8-208ENST00000573716 PPP1R10Q96QC0 940 aaKnown RBP13.41□□□□□ -0.26
PRPF8-208ENST00000573716 HSD17B14Q9BPX1 270 aa13.41□□□□□ -0.26
PRPF8-208ENST00000573716 C2orf40Q9H1Z8 148 aa13.41□□□□□ -0.26
PRPF8-208ENST00000573716 TTC12Q9H892 705 aaPredicted RBP13.41□□□□□ -0.26
PRPF8-208ENST00000573716 ASAH2Q9NR71 780 aa13.41□□□□□ -0.26
PRPF8-208ENST00000573716 SPAG17Q6Q759 2223 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms