RNA–Protein interactions for RNA: ENST00000569827.5

CAPN3-220, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 908 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-220ENST00000569827 PDXDC1Q6P996 788 aa13.26□□□□□ -0.29
CAPN3-220ENST00000569827 TAS1R3Q7RTX0 852 aa13.26□□□□□ -0.29
CAPN3-220ENST00000569827 C18orf25Q96B23 403 aaPredicted RBP13.26□□□□□ -0.29
CAPN3-220ENST00000569827 CYP4F11Q9HBI6 524 aa13.26□□□□□ -0.29
CAPN3-220ENST00000569827 CCDC169A6NNP5 214 aa13.25□□□□□ -0.29
CAPN3-220ENST00000569827 PP2D1A8MPX8 630 aa13.25□□□□□ -0.29
CAPN3-220ENST00000569827 TMEM189-UBE2V1I3L0A0 370 aa13.25□□□□□ -0.29
CAPN3-220ENST00000569827 PODXLO00592 558 aa13.25□□□□□ -0.29
CAPN3-220ENST00000569827 RPA1P27694 616 aa13.25□□□□□ -0.29
CAPN3-220ENST00000569827 NEK4P51957 841 aa13.25□□□□□ -0.29
CAPN3-220ENST00000569827 PEX3P56589 373 aa13.25□□□□□ -0.29
CAPN3-220ENST00000569827 PFKPQ01813 784 aa13.25□□□□□ -0.29
CAPN3-220ENST00000569827 FZD5Q13467 585 aa13.25□□□□□ -0.29
CAPN3-220ENST00000569827 ANKRD1Q15327 319 aa13.25□□□□□ -0.29
CAPN3-220ENST00000569827 UVSSAQ2YD98 709 aa13.25□□□□□ -0.29
CAPN3-220ENST00000569827 FAM78AQ5JUQ0 283 aa13.25□□□□□ -0.29
CAPN3-220ENST00000569827 PRSS36Q5K4E3 855 aa13.25□□□□□ -0.29
CAPN3-220ENST00000569827 ANKS3Q6ZW76 656 aa13.25□□□□□ -0.29
CAPN3-220ENST00000569827 GPIHBP1Q8IV16 184 aa13.25□□□□□ -0.29
CAPN3-220ENST00000569827 CCDC83Q8IWF9 413 aa13.25□□□□□ -0.29
CAPN3-220ENST00000569827 ATRIPQ8WXE1 791 aa13.25□□□□□ -0.29
CAPN3-220ENST00000569827 IFT74Q96LB3 600 aa13.25□□□□□ -0.29
CAPN3-220ENST00000569827 ZSWIM3Q96MP5 696 aa13.25□□□□□ -0.29
CAPN3-220ENST00000569827 TARS2Q9BW92 718 aaKnown RBP13.25□□□□□ -0.29
CAPN3-220ENST00000569827 DLL3Q9NYJ7 618 aa13.25□□□□□ -0.29
CAPN3-220ENST00000569827 FBXO4Q9UKT5 387 aa13.25□□□□□ -0.29
CAPN3-220ENST00000569827 KCNH3Q9ULD8 1083 aa13.25□□□□□ -0.29
CAPN3-220ENST00000569827 GREB1Q4ZG55 1949 aa13.25□□□□□ -0.29
CAPN3-220ENST00000569827 MYO16Q9Y6X6 1858 aa13.25□□□□□ -0.29
CAPN3-220ENST00000569827 KMT2BQ9UMN6 2715 aaPredicted RBP13.25□□□□□ -0.29
CAPN3-220ENST00000569827 E9PMD0 336 aa13.24□□□□□ -0.29
CAPN3-220ENST00000569827 SPTLC1O15269 473 aa13.24□□□□□ -0.29
CAPN3-220ENST00000569827 ECI2O75521 394 aa13.24□□□□□ -0.29
CAPN3-220ENST00000569827 POU2F2P09086 479 aa13.24□□□□□ -0.29
CAPN3-220ENST00000569827 PTPN2P17706 415 aa13.24□□□□□ -0.29
CAPN3-220ENST00000569827 HOXC13P31276 330 aa13.24□□□□□ -0.29
CAPN3-220ENST00000569827 ELF1P32519 619 aa13.24□□□□□ -0.29
CAPN3-220ENST00000569827 RBM25P49756 843 aaKnown RBP13.24□□□□□ -0.29
CAPN3-220ENST00000569827 CDR1P51861 262 aa13.24□□□□□ -0.29
CAPN3-220ENST00000569827 SPAG1Q07617 926 aa13.24□□□□□ -0.29
CAPN3-220ENST00000569827 PPP2R5AQ15172 486 aa13.24□□□□□ -0.29
CAPN3-220ENST00000569827 ZNF528Q3MIS6 628 aa13.24□□□□□ -0.29
CAPN3-220ENST00000569827 TTC38Q5R3I4 469 aa13.24□□□□□ -0.29
CAPN3-220ENST00000569827 DAW1Q8N136 415 aa13.24□□□□□ -0.29
CAPN3-220ENST00000569827 ERMNQ8TAM6 284 aa13.24□□□□□ -0.29
CAPN3-220ENST00000569827 ZBTB45Q96K62 511 aaPredicted RBP13.24□□□□□ -0.29
CAPN3-220ENST00000569827 CNTNAP3BQ96NU0 1288 aa13.24□□□□□ -0.29
CAPN3-220ENST00000569827 ACO2Q99798 780 aaKnown RBP13.24□□□□□ -0.29
CAPN3-220ENST00000569827 RUSC1Q9BVN2 902 aa13.24□□□□□ -0.29
CAPN3-220ENST00000569827 CNTNAP3Q9BZ76 1288 aa13.24□□□□□ -0.29
CAPN3-220ENST00000569827 BRD9Q9H8M2 597 aa13.24□□□□□ -0.29
CAPN3-220ENST00000569827 PARD6AQ9NPB6 346 aa13.24□□□□□ -0.29
CAPN3-220ENST00000569827 DDX19AQ9NUU7 478 aaKnown RBP13.24□□□□□ -0.29
CAPN3-220ENST00000569827 USP18Q9UMW8 372 aa13.24□□□□□ -0.29
CAPN3-220ENST00000569827 KIAA1024Q9UPX6 916 aa13.24□□□□□ -0.29
CAPN3-220ENST00000569827 INSL5Q9Y5Q6 135 aa13.24□□□□□ -0.29
CAPN3-220ENST00000569827 BACE2Q9Y5Z0 518 aa13.24□□□□□ -0.29
CAPN3-220ENST00000569827 ARHGEF37A1IGU5 675 aa13.23□□□□□ -0.29
CAPN3-220ENST00000569827 DCDC2BA2VCK2 349 aa13.23□□□□□ -0.29
CAPN3-220ENST00000569827 SFI1A8K8P3 1242 aa13.23□□□□□ -0.29
CAPN3-220ENST00000569827 K7ERI5 159 aa13.23□□□□□ -0.29
CAPN3-220ENST00000569827 HIP1RO75146 1068 aa13.23□□□□□ -0.29
CAPN3-220ENST00000569827 MYL4P12829 197 aa13.23□□□□□ -0.29
CAPN3-220ENST00000569827 CDC25AP30304 524 aa13.23□□□□□ -0.29
CAPN3-220ENST00000569827 GDI1P31150 447 aa13.23□□□□□ -0.29
CAPN3-220ENST00000569827 VIPR2P41587 438 aa13.23□□□□□ -0.29
CAPN3-220ENST00000569827 GRM5P41594 1212 aa13.23□□□□□ -0.29
CAPN3-220ENST00000569827 NPTX2P47972 431 aa13.23□□□□□ -0.29
CAPN3-220ENST00000569827 YARSP54577 528 aaKnown RBP13.23□□□□□ -0.29
CAPN3-220ENST00000569827 ANAPC15P60006 121 aa13.23□□□□□ -0.29
CAPN3-220ENST00000569827 RAD51AP2Q09MP3 1159 aa13.23□□□□□ -0.29
CAPN3-220ENST00000569827 SLC8B1Q6J4K2 584 aa13.23□□□□□ -0.29
CAPN3-220ENST00000569827 VITQ6UXI7 678 aa13.23□□□□□ -0.29
CAPN3-220ENST00000569827 ZBTB44Q8NCP5 570 aa13.23□□□□□ -0.29
CAPN3-220ENST00000569827 ZNF461Q8TAF7 563 aa13.23□□□□□ -0.29
CAPN3-220ENST00000569827 CLDN23Q96B33 292 aa13.23□□□□□ -0.29
CAPN3-220ENST00000569827 ELSPBP1Q96BH3 223 aa13.23□□□□□ -0.29
CAPN3-220ENST00000569827 UROC1Q96N76 676 aa13.23□□□□□ -0.29
CAPN3-220ENST00000569827 CCDC94Q9BW85 323 aaPredicted RBP13.23□□□□□ -0.29
CAPN3-220ENST00000569827 PRMT8Q9NR22 394 aaPredicted RBP13.23□□□□□ -0.29
CAPN3-220ENST00000569827 ZSCAN32Q9NX65 697 aa13.23□□□□□ -0.29
CAPN3-220ENST00000569827 CEP72Q9P209 647 aa13.23□□□□□ -0.29
CAPN3-220ENST00000569827 TUBGCP4Q9UGJ1 667 aa13.23□□□□□ -0.29
CAPN3-220ENST00000569827 FBXL5Q9UKA1 691 aa13.23□□□□□ -0.29
CAPN3-220ENST00000569827 TNFSF13BQ9Y275 285 aa13.23□□□□□ -0.29
CAPN3-220ENST00000569827 NUB1Q9Y5A7 615 aa13.23□□□□□ -0.29
CAPN3-220ENST00000569827 PCDHGA2Q9Y5H1 932 aa13.23□□□□□ -0.29
CAPN3-220ENST00000569827 TIMM13Q9Y5L4 95 aaPredicted RBP13.23□□□□□ -0.29
CAPN3-220ENST00000569827 PHLPP2Q6ZVD8 1323 aa13.22□□□□□ -0.29
CAPN3-220ENST00000569827 ABLIM1O14639 778 aa13.22□□□□□ -0.29
CAPN3-220ENST00000569827 SLC16A4O15374 487 aa13.22□□□□□ -0.29
CAPN3-220ENST00000569827 TRAPPC3O43617 180 aa13.22□□□□□ -0.29
CAPN3-220ENST00000569827 LILRB5O75023 590 aa13.22□□□□□ -0.29
CAPN3-220ENST00000569827 MOSPD3O75425 235 aa13.22□□□□□ -0.29
CAPN3-220ENST00000569827 KRT37O76014 449 aa13.22□□□□□ -0.29
CAPN3-220ENST00000569827 ABLIM3O94929 683 aa13.22□□□□□ -0.29
CAPN3-220ENST00000569827 OR4Q2P0C623 313 aa13.22□□□□□ -0.29
CAPN3-220ENST00000569827 MCM4P33991 863 aa13.22□□□□□ -0.29
CAPN3-220ENST00000569827 EFNA5P52803 228 aa13.22□□□□□ -0.29
CAPN3-220ENST00000569827 ATXN1P54253 815 aaKnown RBP13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms