RNA–Protein interactions for RNA: ENST00000567271.1

NME3-210, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2

Gene NME3, Length 752 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-210ENST00000567271 KIAA0391O15091 583 aaKnown RBP23.5■■□□□ 1.35
NME3-210ENST00000567271 EXTL3O43909 919 aa23.5■■□□□ 1.35
NME3-210ENST00000567271 TBX10O75333 385 aa23.5■■□□□ 1.35
NME3-210ENST00000567271 RHOBTB3O94955 611 aa23.5■■□□□ 1.35
NME3-210ENST00000567271 NDUFV1P49821 464 aa23.5■■□□□ 1.35
NME3-210ENST00000567271 SNRPFP62306 86 aaKnown RBP23.5■■□□□ 1.35
NME3-210ENST00000567271 RBM10P98175 930 aaKnown RBP23.5■■□□□ 1.35
NME3-210ENST00000567271 ELAVL2Q12926 359 aaKnown RBP23.5■■□□□ 1.35
NME3-210ENST00000567271 FAM171A1Q5VUB5 890 aa23.5■■□□□ 1.35
NME3-210ENST00000567271 JADE1Q6IE81 842 aa23.5■■□□□ 1.35
NME3-210ENST00000567271 TMEM184AQ6ZMB5 413 aa23.5■■□□□ 1.35
NME3-210ENST00000567271 CCDC47Q96A33 483 aaKnown RBP23.5■■□□□ 1.35
NME3-210ENST00000567271 TIGD1Q96MW7 591 aa23.5■■□□□ 1.35
NME3-210ENST00000567271 KLHL5Q96PQ7 755 aa23.5■■□□□ 1.35
NME3-210ENST00000567271 EMILIN2Q9BXX0 1053 aa23.5■■□□□ 1.35
NME3-210ENST00000567271 RXFP1Q9HBX9 757 aa23.5■■□□□ 1.35
NME3-210ENST00000567271 AGPAT3Q9NRZ7 376 aa23.5■■□□□ 1.35
NME3-210ENST00000567271 CLEC1BQ9P126 229 aa23.5■■□□□ 1.35
NME3-210ENST00000567271 DERAQ9Y315 318 aa23.5■■□□□ 1.35
NME3-210ENST00000567271 GOLGA8IPA6NC78 632 aa23.49■■□□□ 1.35
NME3-210ENST00000567271 GOLGA8JA6NMD2 632 aa23.49■■□□□ 1.35
NME3-210ENST00000567271 XPOTO43592 962 aaKnown RBP23.49■■□□□ 1.35
NME3-210ENST00000567271 CNPP09543 421 aaKnown RBP23.49■■□□□ 1.35
NME3-210ENST00000567271 LRPAP1P30533 357 aa23.49■■□□□ 1.35
NME3-210ENST00000567271 KCNQ1P51787 676 aa23.49■■□□□ 1.35
NME3-210ENST00000567271 KCNB1Q14721 858 aa23.49■■□□□ 1.35
NME3-210ENST00000567271 KNOP1Q1ED39 458 aaKnown RBP23.49■■□□□ 1.35
NME3-210ENST00000567271 TJAP1Q5JTD0 557 aa23.49■■□□□ 1.35
NME3-210ENST00000567271 SPATA1Q5VX52 437 aa23.49■■□□□ 1.35
NME3-210ENST00000567271 GPD1LQ8N335 351 aa23.49■■□□□ 1.35
NME3-210ENST00000567271 GADD45GIP1Q8TAE8 222 aaPredicted RBP23.49■■□□□ 1.35
NME3-210ENST00000567271 TTPALQ9BTX7 342 aa23.49■■□□□ 1.35
NME3-210ENST00000567271 TSHZ2Q9NRE2 1034 aa23.49■■□□□ 1.35
NME3-210ENST00000567271 HSPBP1Q9NZL4 362 aa23.49■■□□□ 1.35
NME3-210ENST00000567271 HCFC2Q9Y5Z7 792 aa23.49■■□□□ 1.35
NME3-210ENST00000567271 TRAPPC3O43617 180 aa23.48■■□□□ 1.35
NME3-210ENST00000567271 IL18RAPO95256 599 aa23.48■■□□□ 1.35
NME3-210ENST00000567271 NFICP08651 508 aa23.48■■□□□ 1.35
NME3-210ENST00000567271 PNOCQ13519 176 aa23.48■■□□□ 1.35
NME3-210ENST00000567271 TMEM132DQ14C87 1099 aa23.48■■□□□ 1.35
NME3-210ENST00000567271 RTP2Q5QGT7 225 aa23.48■■□□□ 1.35
NME3-210ENST00000567271 LLGL2Q6P1M3 1020 aa23.48■■□□□ 1.35
NME3-210ENST00000567271 HS2ST1Q7LGA3 356 aa23.48■■□□□ 1.35
NME3-210ENST00000567271 BRSK2Q8IWQ3 736 aa23.48■■□□□ 1.35
NME3-210ENST00000567271 TMEM130Q8N3G9 435 aa23.48■■□□□ 1.35
NME3-210ENST00000567271 RIN2Q8WYP3 895 aaPredicted RBP23.48■■□□□ 1.35
NME3-210ENST00000567271 MSLNLQ96KJ4 702 aa23.48■■□□□ 1.35
NME3-210ENST00000567271 IPO9Q96P70 1041 aaKnown RBP23.48■■□□□ 1.35
NME3-210ENST00000567271 RBAKQ9NYW8 714 aaPredicted RBP23.48■■□□□ 1.35
NME3-210ENST00000567271 CGNQ9P2M7 1197 aaKnown RBP23.48■■□□□ 1.35
NME3-210ENST00000567271 BARX2Q9UMQ3 279 aaPredicted RBP23.48■■□□□ 1.35
NME3-210ENST00000567271 C2CD2Q9Y426 696 aa23.48■■□□□ 1.35
NME3-210ENST00000567271 VCANP13611 3396 aa23.48■■□□□ 1.35
NME3-210ENST00000567271 TEX28O15482 410 aa23.47■■□□□ 1.35
NME3-210ENST00000567271 BMP1P13497 986 aa23.47■■□□□ 1.35
NME3-210ENST00000567271 FGFR3P22607 806 aa23.47■■□□□ 1.35
NME3-210ENST00000567271 KLRC2P26717 231 aa23.47■■□□□ 1.35
NME3-210ENST00000567271 BRCC3P46736 316 aa23.47■■□□□ 1.35
NME3-210ENST00000567271 GUCY2FP51841 1108 aa23.47■■□□□ 1.35
NME3-210ENST00000567271 PDZRN4Q6ZMN7 1036 aaPredicted RBP23.47■■□□□ 1.35
NME3-210ENST00000567271 PPFIBP1Q86W92 1011 aa23.47■■□□□ 1.35
NME3-210ENST00000567271 CEP57Q86XR8 500 aa23.47■■□□□ 1.35
NME3-210ENST00000567271 BEST2Q8NFU1 509 aa23.47■■□□□ 1.35
NME3-210ENST00000567271 SLC22A17Q8WUG5 538 aa23.47■■□□□ 1.35
NME3-210ENST00000567271 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP23.47■■□□□ 1.35
NME3-210ENST00000567271 CLIC2O15247 247 aa23.46■■□□□ 1.35
NME3-210ENST00000567271 SRGAP2BP0DMP2 458 aa23.46■■□□□ 1.35
NME3-210ENST00000567271 WNT7BP56706 349 aa23.46■■□□□ 1.35
NME3-210ENST00000567271 NT5DC4Q86YG4 428 aa23.46■■□□□ 1.35
NME3-210ENST00000567271 C12orf56Q8IXR9 622 aa23.46■■□□□ 1.35
NME3-210ENST00000567271 ELOA2Q8IYF1 753 aaPredicted RBP23.46■■□□□ 1.35
NME3-210ENST00000567271 LNX1Q8TBB1 728 aaPredicted RBP23.46■■□□□ 1.35
NME3-210ENST00000567271 NOC3LQ8WTT2 800 aaKnown RBP23.46■■□□□ 1.35
NME3-210ENST00000567271 PIK3R5Q8WYR1 880 aa23.46■■□□□ 1.35
NME3-210ENST00000567271 CASP10Q92851 521 aa23.46■■□□□ 1.35
NME3-210ENST00000567271 KIAA1586Q9HCI6 787 aa23.46■■□□□ 1.35
NME3-210ENST00000567271 FNIP2Q9P278 1114 aa23.46■■□□□ 1.35
NME3-210ENST00000567271 NUB1Q9Y5A7 615 aa23.46■■□□□ 1.35
NME3-210ENST00000567271 ANK1P16157 1881 aa23.45■■□□□ 1.35
NME3-210ENST00000567271 ZNF233A6NK53 670 aa23.45■■□□□ 1.34
NME3-210ENST00000567271 I3L4J1 428 aa23.45■■□□□ 1.34
NME3-210ENST00000567271 CLCN4P51793 760 aa23.45■■□□□ 1.34
NME3-210ENST00000567271 CREMQ03060 361 aa23.45■■□□□ 1.34
NME3-210ENST00000567271 CLUL1Q15846 466 aa23.45■■□□□ 1.34
NME3-210ENST00000567271 PUS10Q3MIT2 529 aaKnown RBP23.45■■□□□ 1.34
NME3-210ENST00000567271 PTCRAQ6ISU1 281 aaPredicted RBP23.45■■□□□ 1.34
NME3-210ENST00000567271 PRSS55Q6UWB4 352 aaPredicted RBP23.45■■□□□ 1.34
NME3-210ENST00000567271 CBWD2Q8IUF1 395 aa23.45■■□□□ 1.34
NME3-210ENST00000567271 EFCAB13Q8IY85 973 aa23.45■■□□□ 1.34
NME3-210ENST00000567271 GOLGA5Q8TBA6 731 aa23.45■■□□□ 1.34
NME3-210ENST00000567271 FBXL18Q96ME1 805 aa23.45■■□□□ 1.34
NME3-210ENST00000567271 KCTD10Q9H3F6 313 aa23.45■■□□□ 1.34
NME3-210ENST00000567271 CD207Q9UJ71 328 aa23.45■■□□□ 1.34
NME3-210ENST00000567271 KINO60870 393 aaKnown RBP23.44■■□□□ 1.34
NME3-210ENST00000567271 KIF20AO95235 890 aa23.44■■□□□ 1.34
NME3-210ENST00000567271 ADH1AP07327 375 aa23.44■■□□□ 1.34
NME3-210ENST00000567271 EPCAMP16422 314 aa23.44■■□□□ 1.34
NME3-210ENST00000567271 TKTP29401 623 aaKnown RBP23.44■■□□□ 1.34
NME3-210ENST00000567271 CYP2J2P51589 502 aa23.44■■□□□ 1.34
NME3-210ENST00000567271 UBE2HP62256 183 aa23.44■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms