RNA–Protein interactions for RNA: ENST00000566600.1

NME3-209, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2

Gene NME3, Length 913 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-209ENST00000566600 ANK1P16157 1881 aa28.32■■■□□ 2.12
NME3-209ENST00000566600 RPL13P26373 211 aaKnown RBP28.32■■■□□ 2.12
NME3-209ENST00000566600 USP41Q3LFD5 358 aa28.32■■■□□ 2.12
NME3-209ENST00000566600 PLPP4Q5VZY2 271 aa28.32■■■□□ 2.12
NME3-209ENST00000566600 RNF168Q8IYW5 571 aaPredicted RBP28.32■■■□□ 2.12
NME3-209ENST00000566600 TRIML1Q8N9V2 468 aa28.32■■■□□ 2.12
NME3-209ENST00000566600 PPM1EQ8WY54 764 aa28.32■■■□□ 2.12
NME3-209ENST00000566600 NUP62CLQ9H1M0 184 aa28.32■■■□□ 2.12
NME3-209ENST00000566600 DMAC2Q9NW81 257 aa28.32■■■□□ 2.12
NME3-209ENST00000566600 IRAK3Q9Y616 596 aa28.32■■■□□ 2.12
NME3-209ENST00000566600 FSD2A1L4K1 749 aa28.31■■■□□ 2.12
NME3-209ENST00000566600 NCK2O43639 380 aa28.31■■■□□ 2.12
NME3-209ENST00000566600 CXCL14O95715 111 aa28.31■■■□□ 2.12
NME3-209ENST00000566600 MORC3Q14149 939 aa28.31■■■□□ 2.12
NME3-209ENST00000566600 TCEAL5Q5H9L2 206 aa28.31■■■□□ 2.12
NME3-209ENST00000566600 MRPL43Q8N983 215 aaKnown RBP28.31■■■□□ 2.12
NME3-209ENST00000566600 RDH13Q8NBN7 331 aa28.31■■■□□ 2.12
NME3-209ENST00000566600 HASPINQ8TF76 798 aa28.31■■■□□ 2.12
NME3-209ENST00000566600 TULP1O00294 542 aaPredicted RBP28.3■■■□□ 2.12
NME3-209ENST00000566600 MBD3O95983 291 aa28.3■■■□□ 2.12
NME3-209ENST00000566600 URODP06132 367 aa28.3■■■□□ 2.12
NME3-209ENST00000566600 PAX3P23760 479 aa28.3■■■□□ 2.12
NME3-209ENST00000566600 EDRF1Q3B7T1 1238 aa28.3■■■□□ 2.12
NME3-209ENST00000566600 ISM2Q6H9L7 571 aa28.3■■■□□ 2.12
NME3-209ENST00000566600 KIAA1841Q6NSI8 718 aa28.3■■■□□ 2.12
NME3-209ENST00000566600 GPR65Q8IYL9 337 aa28.3■■■□□ 2.12
NME3-209ENST00000566600 ADSSL1Q8N142 457 aa28.3■■■□□ 2.12
NME3-209ENST00000566600 TSG101Q99816 390 aa28.3■■■□□ 2.12
NME3-209ENST00000566600 GPR62Q9BZJ7 368 aa28.3■■■□□ 2.12
NME3-209ENST00000566600 TLE6Q9H808 572 aa28.3■■■□□ 2.12
NME3-209ENST00000566600 PDE11AQ9HCR9 933 aa28.3■■■□□ 2.12
NME3-209ENST00000566600 MRPL17Q9NRX2 175 aaKnown RBP28.3■■■□□ 2.12
NME3-209ENST00000566600 DPP3Q9NY33 737 aa28.3■■■□□ 2.12
NME3-209ENST00000566600 NUB1Q9Y5A7 615 aa28.3■■■□□ 2.12
NME3-209ENST00000566600 PSMA7O14818 248 aa28.29■■■□□ 2.12
NME3-209ENST00000566600 CA8P35219 290 aa28.29■■■□□ 2.12
NME3-209ENST00000566600 GLUD2P49448 558 aa28.29■■■□□ 2.12
NME3-209ENST00000566600 CYP24A1Q07973 514 aa28.29■■■□□ 2.12
NME3-209ENST00000566600 EFCAB13Q8IY85 973 aa28.29■■■□□ 2.12
NME3-209ENST00000566600 DHTKD1Q96HY7 919 aaPredicted RBP28.29■■■□□ 2.12
NME3-209ENST00000566600 CDCA3Q99618 268 aaPredicted RBP28.29■■■□□ 2.12
NME3-209ENST00000566600 CHST7Q9NS84 486 aa28.29■■■□□ 2.12
NME3-209ENST00000566600 FRMD4BQ9Y2L6 1034 aa28.29■■■□□ 2.12
NME3-209ENST00000566600 ATG2AQ2TAZ0 1938 aa28.29■■■□□ 2.12
NME3-209ENST00000566600 C2orf71A6NGG8 1288 aa28.28■■■□□ 2.12
NME3-209ENST00000566600 BIN1O00499 593 aa28.28■■■□□ 2.12
NME3-209ENST00000566600 NR2F2P24468 414 aa28.28■■■□□ 2.12
NME3-209ENST00000566600 TFAMQ00059 246 aaKnown RBP28.28■■■□□ 2.12
NME3-209ENST00000566600 DSG1Q02413 1049 aa28.28■■■□□ 2.12
NME3-209ENST00000566600 PSMD6Q15008 389 aa28.28■■■□□ 2.12
NME3-209ENST00000566600 SKIV2LQ15477 1246 aaKnown RBP28.28■■■□□ 2.12
NME3-209ENST00000566600 PTPN14Q15678 1187 aa28.28■■■□□ 2.12
NME3-209ENST00000566600 ZCWPW2Q504Y3 356 aa28.28■■■□□ 2.12
NME3-209ENST00000566600 FAM171A1Q5VUB5 890 aa28.28■■■□□ 2.12
NME3-209ENST00000566600 CENPPQ6IPU0 288 aa28.28■■■□□ 2.12
NME3-209ENST00000566600 C3orf58Q8NDZ4 430 aa28.28■■■□□ 2.12
NME3-209ENST00000566600 GPT2Q8TD30 523 aa28.28■■■□□ 2.12
NME3-209ENST00000566600 MFSD14AQ96MC6 490 aa28.28■■■□□ 2.12
NME3-209ENST00000566600 FNBP1Q96RU3 617 aa28.28■■■□□ 2.12
NME3-209ENST00000566600 PCDHGC5Q9Y5F6 944 aa28.28■■■□□ 2.12
NME3-209ENST00000566600 MYO7AQ13402 2215 aa28.27■■■□□ 2.12
NME3-209ENST00000566600 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP28.27■■■□□ 2.12
NME3-209ENST00000566600 HIDE1A8MVS5 230 aa28.27■■■□□ 2.12
NME3-209ENST00000566600 WNT7BP56706 349 aa28.27■■■□□ 2.12
NME3-209ENST00000566600 LRRC63Q05C16 580 aa28.27■■■□□ 2.12
NME3-209ENST00000566600 PDXDC1Q6P996 788 aa28.27■■■□□ 2.12
NME3-209ENST00000566600 CD300LGQ6UXG3 332 aa28.27■■■□□ 2.12
NME3-209ENST00000566600 PDZRN4Q6ZMN7 1036 aaPredicted RBP28.27■■■□□ 2.12
NME3-209ENST00000566600 TAS1R1Q7RTX1 841 aa28.27■■■□□ 2.12
NME3-209ENST00000566600 WDR49Q8IV35 697 aa28.27■■■□□ 2.12
NME3-209ENST00000566600 TTPALQ9BTX7 342 aa28.27■■■□□ 2.12
NME3-209ENST00000566600 EMILIN2Q9BXX0 1053 aa28.27■■■□□ 2.12
NME3-209ENST00000566600 MAPK13O15264 365 aa28.26■■■□□ 2.11
NME3-209ENST00000566600 SLC34A2O95436 690 aa28.26■■■□□ 2.11
NME3-209ENST00000566600 TMEM191BP0C7N4 346 aa28.26■■■□□ 2.11
NME3-209ENST00000566600 NRIP1P48552 1158 aa28.26■■■□□ 2.11
NME3-209ENST00000566600 GUCY2FP51841 1108 aa28.26■■■□□ 2.11
NME3-209ENST00000566600 CREMQ03060 361 aa28.26■■■□□ 2.11
NME3-209ENST00000566600 ADAM9Q13443 819 aa28.26■■■□□ 2.11
NME3-209ENST00000566600 DUOXA2Q1HG44 320 aa28.26■■■□□ 2.11
NME3-209ENST00000566600 KIAA0319Q5VV43 1072 aa28.26■■■□□ 2.11
NME3-209ENST00000566600 C9orf57Q5W0N0 161 aa28.26■■■□□ 2.11
NME3-209ENST00000566600 ADGRD2Q7Z7M1 963 aa28.26■■■□□ 2.11
NME3-209ENST00000566600 ANKRD36BP1Q96IX9 119 aa28.26■■■□□ 2.11
NME3-209ENST00000566600 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP28.26■■■□□ 2.11
NME3-209ENST00000566600 INTS13Q9NVM9 706 aa28.26■■■□□ 2.11
NME3-209ENST00000566600 ANO9A1A5B4 782 aa28.25■■■□□ 2.11
NME3-209ENST00000566600 TNNC2P02585 160 aa28.25■■■□□ 2.11
NME3-209ENST00000566600 BMP6P22004 513 aa28.25■■■□□ 2.11
NME3-209ENST00000566600 CCNE1P24864 410 aa28.25■■■□□ 2.11
NME3-209ENST00000566600 MCM4P33991 863 aa28.25■■■□□ 2.11
NME3-209ENST00000566600 HYAL1Q12794 435 aa28.25■■■□□ 2.11
NME3-209ENST00000566600 CEP135Q66GS9 1140 aa28.25■■■□□ 2.11
NME3-209ENST00000566600 USP37Q86T82 979 aa28.25■■■□□ 2.11
NME3-209ENST00000566600 RBM23Q86U06 439 aaKnown RBP28.25■■■□□ 2.11
NME3-209ENST00000566600 AUTS2Q8WXX7 1259 aa28.25■■■□□ 2.11
NME3-209ENST00000566600 CCDC127Q96BQ5 260 aa28.25■■■□□ 2.11
NME3-209ENST00000566600 ITGA11Q9UKX5 1188 aa28.25■■■□□ 2.11
NME3-209ENST00000566600 PIRO00625 290 aa28.24■■■□□ 2.11
NME3-209ENST00000566600 CETN3O15182 167 aa28.24■■■□□ 2.11
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms