RNA–Protein interactions for RNA: ENST00000566016.5

SHCBP1-205, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 1 (best)

Gene SHCBP1, Length 1,482 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-205ENST00000566016 CHST7Q9NS84 486 aa22.85■■□□□ 1.25
SHCBP1-205ENST00000566016 DMAC2Q9NW81 257 aa22.85■■□□□ 1.25
SHCBP1-205ENST00000566016 CLIC2O15247 247 aa22.84■■□□□ 1.25
SHCBP1-205ENST00000566016 CALUO43852 315 aaPredicted RBP22.84■■□□□ 1.25
SHCBP1-205ENST00000566016 PPP1R2P41236 205 aa22.84■■□□□ 1.25
SHCBP1-205ENST00000566016 CYP2J2P51589 502 aa22.84■■□□□ 1.25
SHCBP1-205ENST00000566016 SPAG1Q07617 926 aa22.84■■□□□ 1.25
SHCBP1-205ENST00000566016 SURF1Q15526 300 aa22.84■■□□□ 1.25
SHCBP1-205ENST00000566016 ZCWPW2Q504Y3 356 aa22.84■■□□□ 1.25
SHCBP1-205ENST00000566016 PLPP4Q5VZY2 271 aa22.84■■□□□ 1.25
SHCBP1-205ENST00000566016 C3orf58Q8NDZ4 430 aa22.84■■□□□ 1.25
SHCBP1-205ENST00000566016 GPR62Q9BZJ7 368 aa22.84■■□□□ 1.25
SHCBP1-205ENST00000566016 MAN1B1Q9UKM7 699 aa22.84■■□□□ 1.25
SHCBP1-205ENST00000566016 SSX2IPQ9Y2D8 614 aa22.84■■□□□ 1.25
SHCBP1-205ENST00000566016 C2orf71A6NGG8 1288 aa22.83■■□□□ 1.25
SHCBP1-205ENST00000566016 TRAPPC3O43617 180 aa22.83■■□□□ 1.25
SHCBP1-205ENST00000566016 URODP06132 367 aa22.83■■□□□ 1.25
SHCBP1-205ENST00000566016 GLUD2P49448 558 aa22.83■■□□□ 1.25
SHCBP1-205ENST00000566016 PTPN14Q15678 1187 aa22.83■■□□□ 1.25
SHCBP1-205ENST00000566016 CCDC85BQ15834 202 aaPredicted RBP22.83■■□□□ 1.25
SHCBP1-205ENST00000566016 USP41Q3LFD5 358 aa22.83■■□□□ 1.25
SHCBP1-205ENST00000566016 EFCAB13Q8IY85 973 aa22.83■■□□□ 1.25
SHCBP1-205ENST00000566016 SMYD4Q8IYR2 804 aaPredicted RBP22.83■■□□□ 1.25
SHCBP1-205ENST00000566016 TRIML1Q8N9V2 468 aa22.83■■□□□ 1.25
SHCBP1-205ENST00000566016 CLSTN2Q9H4D0 955 aa22.83■■□□□ 1.25
SHCBP1-205ENST00000566016 MAPK8IP1Q9UQF2 711 aa22.83■■□□□ 1.25
SHCBP1-205ENST00000566016 PCDHGC5Q9Y5F6 944 aa22.83■■□□□ 1.25
SHCBP1-205ENST00000566016 CSPG5O95196 566 aa22.82■■□□□ 1.24
SHCBP1-205ENST00000566016 NR3C1P04150 777 aa22.82■■□□□ 1.24
SHCBP1-205ENST00000566016 PAX3P23760 479 aa22.82■■□□□ 1.24
SHCBP1-205ENST00000566016 PRCPP42785 496 aa22.82■■□□□ 1.24
SHCBP1-205ENST00000566016 WNT7BP56706 349 aa22.82■■□□□ 1.24
SHCBP1-205ENST00000566016 DSG1Q02413 1049 aa22.82■■□□□ 1.24
SHCBP1-205ENST00000566016 HYAL1Q12794 435 aa22.82■■□□□ 1.24
SHCBP1-205ENST00000566016 EDRF1Q3B7T1 1238 aa22.82■■□□□ 1.24
SHCBP1-205ENST00000566016 CD300LGQ6UXG3 332 aa22.82■■□□□ 1.24
SHCBP1-205ENST00000566016 HASPINQ8TF76 798 aa22.82■■□□□ 1.24
SHCBP1-205ENST00000566016 MRPL17Q9NRX2 175 aaKnown RBP22.82■■□□□ 1.24
SHCBP1-205ENST00000566016 KIAA1468Q9P260 1216 aa22.82■■□□□ 1.24
SHCBP1-205ENST00000566016 SPTBN5Q9NRC6 3674 aaKnown RBP22.82■■□□□ 1.24
SHCBP1-205ENST00000566016 HIDE1A8MVS5 230 aa22.81■■□□□ 1.24
SHCBP1-205ENST00000566016 EXOC3O60645 756 aa22.81■■□□□ 1.24
SHCBP1-205ENST00000566016 LILRB3O75022 631 aa22.81■■□□□ 1.24
SHCBP1-205ENST00000566016 MORC3Q14149 939 aa22.81■■□□□ 1.24
SHCBP1-205ENST00000566016 DUSP6Q16828 381 aa22.81■■□□□ 1.24
SHCBP1-205ENST00000566016 PDZRN4Q6ZMN7 1036 aaPredicted RBP22.81■■□□□ 1.24
SHCBP1-205ENST00000566016 ADGRD2Q7Z7M1 963 aa22.81■■□□□ 1.24
SHCBP1-205ENST00000566016 ADSSL1Q8N142 457 aa22.81■■□□□ 1.24
SHCBP1-205ENST00000566016 NOC3LQ8WTT2 800 aaKnown RBP22.81■■□□□ 1.24
SHCBP1-205ENST00000566016 PDE11AQ9HCR9 933 aa22.81■■□□□ 1.24
SHCBP1-205ENST00000566016 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP22.8■■□□□ 1.24
SHCBP1-205ENST00000566016 ANO9A1A5B4 782 aa22.8■■□□□ 1.24
SHCBP1-205ENST00000566016 CXCL14O95715 111 aa22.8■■□□□ 1.24
SHCBP1-205ENST00000566016 AARSP49588 968 aaKnown RBP eCLIP22.8■■□□□ 1.24
SHCBP1-205ENST00000566016 CYP24A1Q07973 514 aa22.8■■□□□ 1.24
SHCBP1-205ENST00000566016 STIM1Q13586 685 aa22.8■■□□□ 1.24
SHCBP1-205ENST00000566016 PSMD6Q15008 389 aa22.8■■□□□ 1.24
SHCBP1-205ENST00000566016 CTC1Q2NKJ3 1217 aa22.8■■□□□ 1.24
SHCBP1-205ENST00000566016 KIAA0319Q5VV43 1072 aa22.8■■□□□ 1.24
SHCBP1-205ENST00000566016 CENPPQ6IPU0 288 aa22.8■■□□□ 1.24
SHCBP1-205ENST00000566016 CACTINQ8WUQ7 758 aaKnown RBP22.8■■□□□ 1.24
SHCBP1-205ENST00000566016 PPM1EQ8WY54 764 aa22.8■■□□□ 1.24
SHCBP1-205ENST00000566016 PABPC5Q96DU9 382 aaKnown RBP22.8■■□□□ 1.24
SHCBP1-205ENST00000566016 MFSD14AQ96MC6 490 aa22.8■■□□□ 1.24
SHCBP1-205ENST00000566016 TLE6Q9H808 572 aa22.8■■□□□ 1.24
SHCBP1-205ENST00000566016 MAPK13O15264 365 aa22.79■■□□□ 1.24
SHCBP1-205ENST00000566016 NR2F2P24468 414 aa22.79■■□□□ 1.24
SHCBP1-205ENST00000566016 RPL13P26373 211 aaKnown RBP22.79■■□□□ 1.24
SHCBP1-205ENST00000566016 NRIP1P48552 1158 aa22.79■■□□□ 1.24
SHCBP1-205ENST00000566016 CREMQ03060 361 aa22.79■■□□□ 1.24
SHCBP1-205ENST00000566016 CAMK4Q16566 473 aa22.79■■□□□ 1.24
SHCBP1-205ENST00000566016 C9orf57Q5W0N0 161 aa22.79■■□□□ 1.24
SHCBP1-205ENST00000566016 KIAA1841Q6NSI8 718 aa22.79■■□□□ 1.24
SHCBP1-205ENST00000566016 PDXDC1Q6P996 788 aa22.79■■□□□ 1.24
SHCBP1-205ENST00000566016 TAS1R1Q7RTX1 841 aa22.79■■□□□ 1.24
SHCBP1-205ENST00000566016 WDR49Q8IV35 697 aa22.79■■□□□ 1.24
SHCBP1-205ENST00000566016 EFHBQ8N7U6 833 aa22.79■■□□□ 1.24
SHCBP1-205ENST00000566016 PIK3R5Q8WYR1 880 aa22.79■■□□□ 1.24
SHCBP1-205ENST00000566016 TTPALQ9BTX7 342 aa22.79■■□□□ 1.24
SHCBP1-205ENST00000566016 NUP62CLQ9H1M0 184 aa22.79■■□□□ 1.24
SHCBP1-205ENST00000566016 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP22.79■■□□□ 1.24
SHCBP1-205ENST00000566016 DPP3Q9NY33 737 aa22.79■■□□□ 1.24
SHCBP1-205ENST00000566016 COG5Q9UP83 839 aa22.79■■□□□ 1.24
SHCBP1-205ENST00000566016 NUB1Q9Y5A7 615 aa22.79■■□□□ 1.24
SHCBP1-205ENST00000566016 PIRO00625 290 aa22.79■■□□□ 1.24
SHCBP1-205ENST00000566016 PSMA7O14818 248 aa22.79■■□□□ 1.24
SHCBP1-205ENST00000566016 BMP6P22004 513 aa22.79■■□□□ 1.24
SHCBP1-205ENST00000566016 FGFR3P22607 806 aa22.79■■□□□ 1.24
SHCBP1-205ENST00000566016 FAM171A1Q5VUB5 890 aa22.79■■□□□ 1.24
SHCBP1-205ENST00000566016 FOXR2Q6PJQ5 311 aa22.79■■□□□ 1.24
SHCBP1-205ENST00000566016 SUSD3Q96L08 255 aa22.79■■□□□ 1.24
SHCBP1-205ENST00000566016 RXFP1Q9HBX9 757 aa22.79■■□□□ 1.24
SHCBP1-205ENST00000566016 FRMD4BQ9Y2L6 1034 aa22.79■■□□□ 1.24
SHCBP1-205ENST00000566016 TSC2P49815 1807 aa22.79■■□□□ 1.24
SHCBP1-205ENST00000566016 MTCL1Q9Y4B5 1905 aaKnown RBP22.78■■□□□ 1.24
SHCBP1-205ENST00000566016 SYN3O14994 580 aa22.78■■□□□ 1.24
SHCBP1-205ENST00000566016 MBD3O95983 291 aa22.78■■□□□ 1.24
SHCBP1-205ENST00000566016 GUCY2FP51841 1108 aa22.78■■□□□ 1.24
SHCBP1-205ENST00000566016 TFAMQ00059 246 aaKnown RBP22.78■■□□□ 1.24
SHCBP1-205ENST00000566016 LRRC63Q05C16 580 aa22.78■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms