RNA–Protein interactions for RNA: ENST00000565810.1

CDH1-208, Transcript of cadherin 1, humanhuman

TSL 3

Gene CDH1, Length 282 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-208ENST00000565810 MYO1EQ12965 1108 aa8.4□□□□□ -1.06
CDH1-208ENST00000565810 TUSC3Q13454 348 aa8.4□□□□□ -1.06
CDH1-208ENST00000565810 NCOA4Q13772 614 aa8.4□□□□□ -1.06
CDH1-208ENST00000565810 BTG3Q14201 252 aaPredicted RBP8.4□□□□□ -1.06
CDH1-208ENST00000565810 NR1I3Q14994 352 aa8.4□□□□□ -1.06
CDH1-208ENST00000565810 ZBTB6Q15916 424 aa8.4□□□□□ -1.06
CDH1-208ENST00000565810 EXOC3L4Q17RC7 722 aa8.4□□□□□ -1.06
CDH1-208ENST00000565810 ZACNQ401N2 412 aa8.4□□□□□ -1.06
CDH1-208ENST00000565810 PAN2Q504Q3 1202 aaKnown RBP8.4□□□□□ -1.06
CDH1-208ENST00000565810 C1orf220Q5T0J3 134 aa8.4□□□□□ -1.06
CDH1-208ENST00000565810 SARM1Q6SZW1 724 aa8.4□□□□□ -1.06
CDH1-208ENST00000565810 CRIPAKQ8N1N5 446 aa8.4□□□□□ -1.06
CDH1-208ENST00000565810 GSTCDQ8NEC7 633 aa8.4□□□□□ -1.06
CDH1-208ENST00000565810 FBXL13Q8NEE6 735 aa8.4□□□□□ -1.06
CDH1-208ENST00000565810 ZNF516Q92618 1163 aa8.4□□□□□ -1.06
CDH1-208ENST00000565810 C18orf25Q96B23 403 aaPredicted RBP8.4□□□□□ -1.06
CDH1-208ENST00000565810 ZNF560Q96MR9 790 aa8.4□□□□□ -1.06
CDH1-208ENST00000565810 UROC1Q96N76 676 aa8.4□□□□□ -1.06
CDH1-208ENST00000565810 PPP1R10Q96QC0 940 aaKnown RBP8.4□□□□□ -1.06
CDH1-208ENST00000565810 RAD9AQ99638 391 aa8.4□□□□□ -1.06
CDH1-208ENST00000565810 GDF15Q99988 308 aa8.4□□□□□ -1.06
CDH1-208ENST00000565810 GRPEL1Q9HAV7 217 aa8.4□□□□□ -1.06
CDH1-208ENST00000565810 RTN4Q9NQC3 1192 aaKnown RBP8.4□□□□□ -1.06
CDH1-208ENST00000565810 AAASQ9NRG9 546 aa8.4□□□□□ -1.06
CDH1-208ENST00000565810 RNF19AQ9NV58 838 aa8.4□□□□□ -1.06
CDH1-208ENST00000565810 TBC1D13Q9NVG8 400 aa8.4□□□□□ -1.06
CDH1-208ENST00000565810 RAB20Q9NX57 234 aa8.4□□□□□ -1.06
CDH1-208ENST00000565810 MIOSQ9NXC5 875 aa8.4□□□□□ -1.06
CDH1-208ENST00000565810 CXXC1Q9P0U4 656 aaPredicted RBP8.4□□□□□ -1.06
CDH1-208ENST00000565810 AGAP1Q9UPQ3 857 aa8.4□□□□□ -1.06
CDH1-208ENST00000565810 MYH11P35749 1972 aa8.4□□□□□ -1.06
CDH1-208ENST00000565810 FSD2A1L4K1 749 aa8.39□□□□□ -1.07
CDH1-208ENST00000565810 CASTOR2A6NHX0 329 aa8.39□□□□□ -1.07
CDH1-208ENST00000565810 PODXLO00592 558 aa8.39□□□□□ -1.07
CDH1-208ENST00000565810 MEFVO15553 781 aaPredicted RBP8.39□□□□□ -1.07
CDH1-208ENST00000565810 HLA-DRAP01903 254 aa8.39□□□□□ -1.07
CDH1-208ENST00000565810 ITGB3P05106 788 aa8.39□□□□□ -1.07
CDH1-208ENST00000565810 P4HA1P13674 534 aa8.39□□□□□ -1.07
CDH1-208ENST00000565810 PAX3P23760 479 aa8.39□□□□□ -1.07
CDH1-208ENST00000565810 LRPAP1P30533 357 aa8.39□□□□□ -1.07
CDH1-208ENST00000565810 POLR2BP30876 1174 aaKnown RBP8.39□□□□□ -1.07
CDH1-208ENST00000565810 ATICP31939 592 aa8.39□□□□□ -1.07
CDH1-208ENST00000565810 BMP8BP34820 402 aa8.39□□□□□ -1.07
CDH1-208ENST00000565810 OR1G1P47890 313 aa8.39□□□□□ -1.07
CDH1-208ENST00000565810 GATMP50440 423 aa8.39□□□□□ -1.07
CDH1-208ENST00000565810 AFF1P51825 1210 aaKnown RBP8.39□□□□□ -1.07
CDH1-208ENST00000565810 SHHQ15465 462 aa8.39□□□□□ -1.07
CDH1-208ENST00000565810 SGSM1Q2NKQ1 1148 aa8.39□□□□□ -1.07
CDH1-208ENST00000565810 CBWD6Q4V339 395 aa8.39□□□□□ -1.07
CDH1-208ENST00000565810 CBWD3Q5JTY5 395 aa8.39□□□□□ -1.07
CDH1-208ENST00000565810 MIIPQ5JXC2 388 aa8.39□□□□□ -1.07
CDH1-208ENST00000565810 CBWD5Q5RIA9 395 aa8.39□□□□□ -1.07
CDH1-208ENST00000565810 C9orf50Q5SZB4 431 aa8.39□□□□□ -1.07
CDH1-208ENST00000565810 RASIP1Q5U651 963 aa8.39□□□□□ -1.07
CDH1-208ENST00000565810 TDRD10Q5VZ19 366 aaKnown RBP8.39□□□□□ -1.07
CDH1-208ENST00000565810 DCLRE1AQ6PJP8 1040 aa8.39□□□□□ -1.07
CDH1-208ENST00000565810 C15orf39Q6ZRI6 1047 aa8.39□□□□□ -1.07
CDH1-208ENST00000565810 APTXQ7Z2E3 356 aaKnown RBP8.39□□□□□ -1.07
CDH1-208ENST00000565810 HERC6Q8IVU3 1022 aa8.39□□□□□ -1.07
CDH1-208ENST00000565810 CMTR2Q8IYT2 770 aaKnown RBP8.39□□□□□ -1.07
CDH1-208ENST00000565810 FIBCD1Q8N539 461 aa8.39□□□□□ -1.07
CDH1-208ENST00000565810 LRRC52Q8N7C0 313 aa8.39□□□□□ -1.07
CDH1-208ENST00000565810 C1orf127Q8N9H9 656 aa8.39□□□□□ -1.07
CDH1-208ENST00000565810 EHBP1Q8NDI1 1231 aa8.39□□□□□ -1.07
CDH1-208ENST00000565810 TAS1R2Q8TE23 839 aa8.39□□□□□ -1.07
CDH1-208ENST00000565810 TAF4BQ92750 862 aa8.39□□□□□ -1.07
CDH1-208ENST00000565810 ZNF689Q96CS4 500 aaPredicted RBP8.39□□□□□ -1.07
CDH1-208ENST00000565810 FAM81BQ96LP2 452 aa8.39□□□□□ -1.07
CDH1-208ENST00000565810 NAP1L5Q96NT1 182 aaPredicted RBP8.39□□□□□ -1.07
CDH1-208ENST00000565810 TMEM175Q9BSA9 504 aa8.39□□□□□ -1.07
CDH1-208ENST00000565810 COLEC11Q9BWP8 271 aa8.39□□□□□ -1.07
CDH1-208ENST00000565810 XPO4Q9C0E2 1151 aaKnown RBP8.39□□□□□ -1.07
CDH1-208ENST00000565810 CXCL16Q9H2A7 254 aa8.39□□□□□ -1.07
CDH1-208ENST00000565810 GCNT4Q9P109 453 aa8.39□□□□□ -1.07
CDH1-208ENST00000565810 TUBGCP4Q9UGJ1 667 aa8.39□□□□□ -1.07
CDH1-208ENST00000565810 FAN1Q9Y2M0 1017 aa8.39□□□□□ -1.07
CDH1-208ENST00000565810 COQ4Q9Y3A0 265 aa8.39□□□□□ -1.07
CDH1-208ENST00000565810 NUB1Q9Y5A7 615 aa8.39□□□□□ -1.07
CDH1-208ENST00000565810 PTPRJQ12913 1337 aa8.38□□□□□ -1.07
CDH1-208ENST00000565810 HSFX4A0A1B0GTS1 333 aaPredicted RBP8.38□□□□□ -1.07
CDH1-208ENST00000565810 HSFX3A0A1B0GWH4 333 aaPredicted RBP8.38□□□□□ -1.07
CDH1-208ENST00000565810 A0A1W2PQC6 194 aa8.38□□□□□ -1.07
CDH1-208ENST00000565810 ARHGEF37A1IGU5 675 aa8.38□□□□□ -1.07
CDH1-208ENST00000565810 PIRO00625 290 aa8.38□□□□□ -1.07
CDH1-208ENST00000565810 TEX33O43247 280 aa8.38□□□□□ -1.07
CDH1-208ENST00000565810 ZC3H11AO75152 810 aaKnown RBP eCLIP8.38□□□□□ -1.07
CDH1-208ENST00000565810 TADA2AO75478 443 aa8.38□□□□□ -1.07
CDH1-208ENST00000565810 B3GAT3O94766 335 aa8.38□□□□□ -1.07
CDH1-208ENST00000565810 CST3P01034 146 aaPredicted RBP8.38□□□□□ -1.07
CDH1-208ENST00000565810 LAG3P18627 525 aa8.38□□□□□ -1.07
CDH1-208ENST00000565810 ALDH7A1P49419 539 aaKnown RBP8.38□□□□□ -1.07
CDH1-208ENST00000565810 TAF6P49848 677 aa8.38□□□□□ -1.07
CDH1-208ENST00000565810 CLCNKBP51801 687 aa8.38□□□□□ -1.07
CDH1-208ENST00000565810 GUCY2FP51841 1108 aa8.38□□□□□ -1.07
CDH1-208ENST00000565810 HTRA4P83105 476 aaPredicted RBP8.38□□□□□ -1.07
CDH1-208ENST00000565810 SYCP1Q15431 976 aa8.38□□□□□ -1.07
CDH1-208ENST00000565810 UPP1Q16831 310 aa8.38□□□□□ -1.07
CDH1-208ENST00000565810 ZNF699Q32M78 642 aa8.38□□□□□ -1.07
CDH1-208ENST00000565810 SV2CQ496J9 727 aa8.38□□□□□ -1.07
CDH1-208ENST00000565810 ZNF667Q5HYK9 610 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms