RNA–Protein interactions for RNA: ENST00000564600.6

CHD9-211, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 4

Gene CHD9, Length 539 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-211ENST00000564600 DIRC3C9JPN6 131 aa4.13□□□□□ -1.75
CHD9-211ENST00000564600 NDUFS2O75306 463 aa4.13□□□□□ -1.75
CHD9-211ENST00000564600 GPR32O75388 356 aa4.13□□□□□ -1.75
CHD9-211ENST00000564600 ENDOD1O94919 500 aa4.13□□□□□ -1.75
CHD9-211ENST00000564600 CFIP05156 583 aa4.13□□□□□ -1.75
CHD9-211ENST00000564600 SBK3P0C264 359 aa4.13□□□□□ -1.75
CHD9-211ENST00000564600 IL2RBP14784 551 aa4.13□□□□□ -1.75
CHD9-211ENST00000564600 ATP5JP18859 108 aa4.13□□□□□ -1.75
CHD9-211ENST00000564600 DDX6P26196 483 aaKnown RBP eCLIP4.13□□□□□ -1.75
CHD9-211ENST00000564600 BMPR1AP36894 532 aa4.13□□□□□ -1.75
CHD9-211ENST00000564600 FOXI1Q12951 378 aa4.13□□□□□ -1.75
CHD9-211ENST00000564600 ODF1Q14990 250 aa4.13□□□□□ -1.75
CHD9-211ENST00000564600 UBXN2BQ14CS0 331 aa4.13□□□□□ -1.75
CHD9-211ENST00000564600 SYDE2Q5VT97 1194 aa4.13□□□□□ -1.75
CHD9-211ENST00000564600 FBXO42Q6P3S6 717 aa4.13□□□□□ -1.75
CHD9-211ENST00000564600 SEM1Q6ZVN7 128 aa4.13□□□□□ -1.75
CHD9-211ENST00000564600 NECAB2Q7Z6G3 386 aa4.13□□□□□ -1.75
CHD9-211ENST00000564600 MAPKAPK5Q8IW41 473 aa4.13□□□□□ -1.75
CHD9-211ENST00000564600 RHOT1Q8IXI2 618 aa4.13□□□□□ -1.75
CHD9-211ENST00000564600 NACC2Q96BF6 587 aa4.13□□□□□ -1.75
CHD9-211ENST00000564600 VSX1Q9NZR4 365 aaPredicted RBP4.13□□□□□ -1.75
CHD9-211ENST00000564600 SERPINB13Q9UIV8 391 aa4.13□□□□□ -1.75
CHD9-211ENST00000564600 ZBTB21Q9ULJ3 1066 aa4.13□□□□□ -1.75
CHD9-211ENST00000564600 IPPQ9Y573 584 aa4.13□□□□□ -1.75
CHD9-211ENST00000564600 EPN1Q9Y6I3 576 aaPredicted RBP4.13□□□□□ -1.75
CHD9-211ENST00000564600 FPGT-TNNI3KV9GXZ4 949 aa4.13□□□□□ -1.75
CHD9-211ENST00000564600 MYBBP1AQ9BQG0 1328 aaKnown RBP4.13□□□□□ -1.75
CHD9-211ENST00000564600 COL11A2P13942 1736 aaPredicted RBP4.12□□□□□ -1.75
CHD9-211ENST00000564600 A0A1B0GTW7 788 aa4.12□□□□□ -1.75
CHD9-211ENST00000564600 MYBL2P10244 700 aa4.12□□□□□ -1.75
CHD9-211ENST00000564600 DDCP20711 480 aa4.12□□□□□ -1.75
CHD9-211ENST00000564600 GCSHP23434 173 aa4.12□□□□□ -1.75
CHD9-211ENST00000564600 NOMO3P69849 1222 aa4.12□□□□□ -1.75
CHD9-211ENST00000564600 HSD11B2P80365 405 aa4.12□□□□□ -1.75
CHD9-211ENST00000564600 ITKQ08881 620 aa4.12□□□□□ -1.75
CHD9-211ENST00000564600 IL10RAQ13651 578 aa4.12□□□□□ -1.75
CHD9-211ENST00000564600 C3orf36Q3SXR2 165 aa4.12□□□□□ -1.75
CHD9-211ENST00000564600 NOMO2Q5JPE7 1267 aa4.12□□□□□ -1.75
CHD9-211ENST00000564600 AMOTL1Q8IY63 956 aa4.12□□□□□ -1.75
CHD9-211ENST00000564600 TMEM132CQ8N3T6 1108 aa4.12□□□□□ -1.75
CHD9-211ENST00000564600 CASKIN2Q8WXE0 1202 aa4.12□□□□□ -1.75
CHD9-211ENST00000564600 FUBP3Q96I24 572 aaKnown RBP eCLIP4.12□□□□□ -1.75
CHD9-211ENST00000564600 TOR3AQ9H497 397 aa4.12□□□□□ -1.75
CHD9-211ENST00000564600 GSTO2Q9H4Y5 243 aa4.12□□□□□ -1.75
CHD9-211ENST00000564600 TMEM140Q9NV12 185 aa4.12□□□□□ -1.75
CHD9-211ENST00000564600 MKS1Q9NXB0 559 aa4.12□□□□□ -1.75
CHD9-211ENST00000564600 MOCS1Q9NZB8 636 aa4.12□□□□□ -1.75
CHD9-211ENST00000564600 FAM30AQ9NZY2 134 aa4.12□□□□□ -1.75
CHD9-211ENST00000564600 HSFX1Q9UBD0 423 aa4.12□□□□□ -1.75
CHD9-211ENST00000564600 ATP11BQ9Y2G3 1177 aa4.12□□□□□ -1.75
CHD9-211ENST00000564600 TNKSO95271 1327 aa4.12□□□□□ -1.75
CHD9-211ENST00000564600 SALL3Q9BXA9 1300 aa4.12□□□□□ -1.75
CHD9-211ENST00000564600 KAT6AQ92794 2004 aa4.12□□□□□ -1.75
CHD9-211ENST00000564600 ARHGEF17Q96PE2 2063 aaPredicted RBP4.12□□□□□ -1.75
CHD9-211ENST00000564600 CDHR4A6H8M9 788 aa4.11□□□□□ -1.75
CHD9-211ENST00000564600 HTRA2O43464 458 aaPredicted RBP4.11□□□□□ -1.75
CHD9-211ENST00000564600 POMCP01189 267 aa4.11□□□□□ -1.75
CHD9-211ENST00000564600 FGFR4P22455 802 aa4.11□□□□□ -1.75
CHD9-211ENST00000564600 CD38P28907 300 aa4.11□□□□□ -1.75
CHD9-211ENST00000564600 GUCY1B3Q02153 619 aa4.11□□□□□ -1.75
CHD9-211ENST00000564600 SLFN5Q08AF3 891 aa4.11□□□□□ -1.75
CHD9-211ENST00000564600 ACAP2Q15057 778 aa4.11□□□□□ -1.75
CHD9-211ENST00000564600 FAM180AQ6UWF9 173 aa4.11□□□□□ -1.75
CHD9-211ENST00000564600 GPR149Q86SP6 731 aa4.11□□□□□ -1.75
CHD9-211ENST00000564600 DRC7Q8IY82 874 aa4.11□□□□□ -1.75
CHD9-211ENST00000564600 MTMR8Q96EF0 704 aa4.11□□□□□ -1.75
CHD9-211ENST00000564600 MARS2Q96GW9 593 aaKnown RBP4.11□□□□□ -1.75
CHD9-211ENST00000564600 TEKT5Q96M29 485 aa4.11□□□□□ -1.75
CHD9-211ENST00000564600 DMRTA2Q96SC8 542 aa4.11□□□□□ -1.75
CHD9-211ENST00000564600 C7orf25Q9BPX7 421 aa4.11□□□□□ -1.75
CHD9-211ENST00000564600 PIPSLA2A3N6 862 aa4.1□□□□□ -1.75
CHD9-211ENST00000564600 FAM171A2A8MVW0 826 aa4.1□□□□□ -1.75
CHD9-211ENST00000564600 XPOTO43592 962 aaKnown RBP4.1□□□□□ -1.75
CHD9-211ENST00000564600 CDKL5O76039 1030 aa4.1□□□□□ -1.75
CHD9-211ENST00000564600 EGR2P11161 476 aaPredicted RBP4.1□□□□□ -1.75
CHD9-211ENST00000564600 TYRP1P17643 537 aa4.1□□□□□ -1.75
CHD9-211ENST00000564600 WASP42768 502 aa4.1□□□□□ -1.75
CHD9-211ENST00000564600 ZNF280AP59817 542 aaPredicted RBP4.1□□□□□ -1.75
CHD9-211ENST00000564600 FLYWCH1Q4VC44 716 aa4.1□□□□□ -1.75
CHD9-211ENST00000564600 RNF187Q5TA31 235 aaPredicted RBP4.1□□□□□ -1.75
CHD9-211ENST00000564600 IFI44Q8TCB0 444 aa4.1□□□□□ -1.75
CHD9-211ENST00000564600 LINC00476Q8WZB0 136 aa4.1□□□□□ -1.75
CHD9-211ENST00000564600 KAT5Q92993 513 aa4.1□□□□□ -1.75
CHD9-211ENST00000564600 CYFIP2Q96F07 1278 aa4.1□□□□□ -1.75
CHD9-211ENST00000564600 ALOXE3Q9BYJ1 711 aa4.1□□□□□ -1.75
CHD9-211ENST00000564600 ALG13Q9NP73 1137 aaKnown RBP4.1□□□□□ -1.75
CHD9-211ENST00000564600 RNF7Q9UBF6 113 aa4.1□□□□□ -1.75
CHD9-211ENST00000564600 PCDHB1Q9Y5F3 818 aa4.1□□□□□ -1.75
CHD9-211ENST00000564600 WASHC2CQ9Y4E1 1318 aa4.1□□□□□ -1.75
CHD9-211ENST00000564600 KLHL33A6NCF5 533 aa4.09□□□□□ -1.75
CHD9-211ENST00000564600 CCDC154A6NI56 674 aa4.09□□□□□ -1.75
CHD9-211ENST00000564600 INO80B-WBP1J3KQ70 363 aa4.09□□□□□ -1.75
CHD9-211ENST00000564600 KIAA0391O15091 583 aaKnown RBP4.09□□□□□ -1.75
CHD9-211ENST00000564600 ZRANB2O95218 330 aaKnown RBP eCLIP4.09□□□□□ -1.75
CHD9-211ENST00000564600 SPATA31D3P0C874 917 aa4.09□□□□□ -1.75
CHD9-211ENST00000564600 ITGAMP11215 1152 aa4.09□□□□□ -1.75
CHD9-211ENST00000564600 FCER1AP12319 257 aa4.09□□□□□ -1.75
CHD9-211ENST00000564600 SEC24CP53992 1094 aa4.09□□□□□ -1.75
CHD9-211ENST00000564600 CXADRP78310 365 aa4.09□□□□□ -1.75
CHD9-211ENST00000564600 DACT2Q5SW24 774 aa4.09□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 79.2 ms