RNA–Protein interactions for RNA: ENST00000564387.5

USB1-209, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 558 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-209ENST00000564387 KCTD10Q9H3F6 313 aa18.8■□□□□ 0.6
USB1-209ENST00000564387 KIAA1586Q9HCI6 787 aa18.8■□□□□ 0.6
USB1-209ENST00000564387 MRPL17Q9NRX2 175 aaKnown RBP18.8■□□□□ 0.6
USB1-209ENST00000564387 TUBGCP4Q9UGJ1 667 aa18.8■□□□□ 0.6
USB1-209ENST00000564387 PODXLO00592 558 aa18.79■□□□□ 0.6
USB1-209ENST00000564387 PER2O15055 1255 aa18.79■□□□□ 0.6
USB1-209ENST00000564387 LINC01565O15544 149 aa18.79■□□□□ 0.6
USB1-209ENST00000564387 XPOTO43592 962 aaKnown RBP18.79■□□□□ 0.6
USB1-209ENST00000564387 CLASP2O75122 1294 aaKnown RBP18.79■□□□□ 0.6
USB1-209ENST00000564387 C1RP00736 705 aa18.79■□□□□ 0.6
USB1-209ENST00000564387 FGFR3P22607 806 aa18.79■□□□□ 0.6
USB1-209ENST00000564387 GLUD2P49448 558 aa18.79■□□□□ 0.6
USB1-209ENST00000564387 WNT7BP56706 349 aa18.79■□□□□ 0.6
USB1-209ENST00000564387 SPAG1Q07617 926 aa18.79■□□□□ 0.6
USB1-209ENST00000564387 PNOCQ13519 176 aa18.79■□□□□ 0.6
USB1-209ENST00000564387 LEXMQ3ZCV2 418 aa18.79■□□□□ 0.6
USB1-209ENST00000564387 JADE1Q6IE81 842 aa18.79■□□□□ 0.6
USB1-209ENST00000564387 RBM23Q86U06 439 aaKnown RBP18.79■□□□□ 0.6
USB1-209ENST00000564387 NELFCDQ8IXH7 590 aa18.79■□□□□ 0.6
USB1-209ENST00000564387 CCDC47Q96A33 483 aaKnown RBP18.79■□□□□ 0.6
USB1-209ENST00000564387 SAAL1Q96ER3 474 aa18.79■□□□□ 0.6
USB1-209ENST00000564387 MSLNLQ96KJ4 702 aa18.79■□□□□ 0.6
USB1-209ENST00000564387 HSPBP1Q9NZL4 362 aa18.79■□□□□ 0.6
USB1-209ENST00000564387 CLEC1BQ9P126 229 aa18.79■□□□□ 0.6
USB1-209ENST00000564387 FNIP2Q9P278 1114 aa18.79■□□□□ 0.6
USB1-209ENST00000564387 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP18.78■□□□□ 0.6
USB1-209ENST00000564387 ANO9A1A5B4 782 aa18.78■□□□□ 0.6
USB1-209ENST00000564387 TBX10O75333 385 aa18.78■□□□□ 0.6
USB1-209ENST00000564387 URODP06132 367 aa18.78■□□□□ 0.6
USB1-209ENST00000564387 NFICP08651 508 aa18.78■□□□□ 0.6
USB1-209ENST00000564387 CNPP09543 421 aaKnown RBP18.78■□□□□ 0.6
USB1-209ENST00000564387 AARSP49588 968 aaKnown RBP eCLIP18.78■□□□□ 0.6
USB1-209ENST00000564387 MRPS5P82675 430 aaKnown RBP18.78■□□□□ 0.6
USB1-209ENST00000564387 TFF2Q03403 129 aa18.78■□□□□ 0.6
USB1-209ENST00000564387 DLX2Q07687 328 aaPredicted RBP18.78■□□□□ 0.6
USB1-209ENST00000564387 TMEM132DQ14C87 1099 aa18.78■□□□□ 0.6
USB1-209ENST00000564387 AAK1Q2M2I8 961 aa18.78■□□□□ 0.6
USB1-209ENST00000564387 COBLL1Q53SF7 1204 aa18.78■□□□□ 0.6
USB1-209ENST00000564387 HS2ST1Q7LGA3 356 aa18.78■□□□□ 0.6
USB1-209ENST00000564387 SLC9A9Q8IVB4 645 aa18.78■□□□□ 0.6
USB1-209ENST00000564387 GUF1Q8N442 669 aaKnown RBP18.78■□□□□ 0.6
USB1-209ENST00000564387 GOLGA5Q8TBA6 731 aa18.78■□□□□ 0.6
USB1-209ENST00000564387 SLC22A17Q8WUG5 538 aa18.78■□□□□ 0.6
USB1-209ENST00000564387 PIK3R5Q8WYR1 880 aa18.78■□□□□ 0.6
USB1-209ENST00000564387 KLHL5Q96PQ7 755 aa18.78■□□□□ 0.6
USB1-209ENST00000564387 ASB2Q96Q27 587 aa18.78■□□□□ 0.6
USB1-209ENST00000564387 PCIF1Q9H4Z3 704 aa18.78■□□□□ 0.6
USB1-209ENST00000564387 IGFLR1Q9H665 355 aa18.78■□□□□ 0.6
USB1-209ENST00000564387 DMAC2Q9NW81 257 aa18.78■□□□□ 0.6
USB1-209ENST00000564387 CLDND1Q9NY35 253 aa18.78■□□□□ 0.6
USB1-209ENST00000564387 VWA8A3KMH1 1905 aa18.77■□□□□ 0.6
USB1-209ENST00000564387 PDXKO00764 312 aa18.77■□□□□ 0.6
USB1-209ENST00000564387 TRAPPC3O43617 180 aa18.77■□□□□ 0.6
USB1-209ENST00000564387 PAX3P23760 479 aa18.77■□□□□ 0.6
USB1-209ENST00000564387 MYBPC2Q14324 1141 aa18.77■□□□□ 0.6
USB1-209ENST00000564387 RTP2Q5QGT7 225 aa18.77■□□□□ 0.6
USB1-209ENST00000564387 FAM171A1Q5VUB5 890 aa18.77■□□□□ 0.6
USB1-209ENST00000564387 PDZRN4Q6ZMN7 1036 aaPredicted RBP18.77■□□□□ 0.6
USB1-209ENST00000564387 EFCAB13Q8IY85 973 aa18.77■□□□□ 0.6
USB1-209ENST00000564387 LNX1Q8TBB1 728 aaPredicted RBP18.77■□□□□ 0.6
USB1-209ENST00000564387 HASPINQ8TF76 798 aa18.77■□□□□ 0.6
USB1-209ENST00000564387 TTPALQ9BTX7 342 aa18.77■□□□□ 0.6
USB1-209ENST00000564387 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP18.77■□□□□ 0.6
USB1-209ENST00000564387 RBAKQ9NYW8 714 aaPredicted RBP18.77■□□□□ 0.6
USB1-209ENST00000564387 TRAF3IP3Q9Y228 551 aa18.77■□□□□ 0.6
USB1-209ENST00000564387 PCDHA5Q9Y5H7 936 aa18.77■□□□□ 0.6
USB1-209ENST00000564387 GOLGA8IPA6NC78 632 aa18.76■□□□□ 0.59
USB1-209ENST00000564387 ZNF233A6NK53 670 aa18.76■□□□□ 0.59
USB1-209ENST00000564387 GOLGA8JA6NMD2 632 aa18.76■□□□□ 0.59
USB1-209ENST00000564387 PIRO00625 290 aa18.76■□□□□ 0.59
USB1-209ENST00000564387 KIF20AO95235 890 aa18.76■□□□□ 0.59
USB1-209ENST00000564387 BMP1P13497 986 aa18.76■□□□□ 0.59
USB1-209ENST00000564387 KCNA5P22460 613 aa18.76■□□□□ 0.59
USB1-209ENST00000564387 RBM10P98175 930 aaKnown RBP18.76■□□□□ 0.59
USB1-209ENST00000564387 NFIL3Q16649 462 aa18.76■□□□□ 0.59
USB1-209ENST00000564387 PPFIBP1Q86W92 1011 aa18.76■□□□□ 0.59
USB1-209ENST00000564387 CBWD2Q8IUF1 395 aa18.76■□□□□ 0.59
USB1-209ENST00000564387 TMEM130Q8N3G9 435 aa18.76■□□□□ 0.59
USB1-209ENST00000564387 XXYLT1Q8NBI6 393 aa18.76■□□□□ 0.59
USB1-209ENST00000564387 BEST2Q8NFU1 509 aa18.76■□□□□ 0.59
USB1-209ENST00000564387 GADD45GIP1Q8TAE8 222 aaPredicted RBP18.76■□□□□ 0.59
USB1-209ENST00000564387 SUSD3Q96L08 255 aa18.76■□□□□ 0.59
USB1-209ENST00000564387 B3GALT6Q96L58 329 aa18.76■□□□□ 0.59
USB1-209ENST00000564387 EMILIN2Q9BXX0 1053 aa18.76■□□□□ 0.59
USB1-209ENST00000564387 RMND1Q9NWS8 449 aa18.76■□□□□ 0.59
USB1-209ENST00000564387 HOOK1Q9UJC3 728 aaKnown RBP18.76■□□□□ 0.59
USB1-209ENST00000564387 HCFC2Q9Y5Z7 792 aa18.76■□□□□ 0.59
USB1-209ENST00000564387 M0QZQ0 153 aa18.75■□□□□ 0.59
USB1-209ENST00000564387 SYN3O14994 580 aa18.75■□□□□ 0.59
USB1-209ENST00000564387 CLIC2O15247 247 aa18.75■□□□□ 0.59
USB1-209ENST00000564387 TEX28O15482 410 aa18.75■□□□□ 0.59
USB1-209ENST00000564387 KINO60870 393 aaKnown RBP18.75■□□□□ 0.59
USB1-209ENST00000564387 PRPF40AO75400 957 aaKnown RBP18.75■□□□□ 0.59
USB1-209ENST00000564387 BRCC3P46736 316 aa18.75■□□□□ 0.59
USB1-209ENST00000564387 CLCN4P51793 760 aa18.75■□□□□ 0.59
USB1-209ENST00000564387 CREMQ03060 361 aa18.75■□□□□ 0.59
USB1-209ENST00000564387 MRPL58Q14197 206 aaKnown RBP18.75■□□□□ 0.59
USB1-209ENST00000564387 C9orf57Q5W0N0 161 aa18.75■□□□□ 0.59
USB1-209ENST00000564387 KIAA1841Q6NSI8 718 aa18.75■□□□□ 0.59
USB1-209ENST00000564387 PDXDC1Q6P996 788 aa18.75■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms