RNA–Protein interactions for RNA: ENST00000564260.1

RNF40-206, Transcript of ring finger protein 40, humanhuman

TSL 2

Gene RNF40, Length 768 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-206ENST00000564260 ZBP1Q9H171 429 aa18.08■□□□□ 0.48
RNF40-206ENST00000564260 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP18.08■□□□□ 0.48
RNF40-206ENST00000564260 CHST7Q9NS84 486 aa18.08■□□□□ 0.48
RNF40-206ENST00000564260 DACH1Q9UI36 760 aa18.08■□□□□ 0.48
RNF40-206ENST00000564260 ITGA11Q9UKX5 1188 aa18.08■□□□□ 0.48
RNF40-206ENST00000564260 COL4A4P53420 1690 aaPredicted RBP18.07■□□□□ 0.48
RNF40-206ENST00000564260 CITO14578 2027 aa18.07■□□□□ 0.48
RNF40-206ENST00000564260 CETN3O15182 167 aa18.07■□□□□ 0.48
RNF40-206ENST00000564260 CLIC2O15247 247 aa18.07■□□□□ 0.48
RNF40-206ENST00000564260 SLC16A3O15427 465 aaKnown RBP18.07■□□□□ 0.48
RNF40-206ENST00000564260 IGFBP4P22692 258 aa18.07■□□□□ 0.48
RNF40-206ENST00000564260 PBX3P40426 434 aa18.07■□□□□ 0.48
RNF40-206ENST00000564260 CYP2J2P51589 502 aa18.07■□□□□ 0.48
RNF40-206ENST00000564260 CLCNKBP51801 687 aa18.07■□□□□ 0.48
RNF40-206ENST00000564260 CLDN10P78369 228 aa18.07■□□□□ 0.48
RNF40-206ENST00000564260 DUOXA2Q1HG44 320 aa18.07■□□□□ 0.48
RNF40-206ENST00000564260 USP41Q3LFD5 358 aa18.07■□□□□ 0.48
RNF40-206ENST00000564260 FUT10Q6P4F1 479 aa18.07■□□□□ 0.48
RNF40-206ENST00000564260 PDZRN4Q6ZMN7 1036 aaPredicted RBP18.07■□□□□ 0.48
RNF40-206ENST00000564260 TMC7Q7Z402 723 aa18.07■□□□□ 0.48
RNF40-206ENST00000564260 TMEM173Q86WV6 379 aaPredicted RBP18.07■□□□□ 0.48
RNF40-206ENST00000564260 VPS52Q8N1B4 723 aa18.07■□□□□ 0.48
RNF40-206ENST00000564260 TMC2Q8TDI7 906 aa18.07■□□□□ 0.48
RNF40-206ENST00000564260 FAM212AQ96EL1 285 aa18.07■□□□□ 0.48
RNF40-206ENST00000564260 ANKRD36BP1Q96IX9 119 aa18.07■□□□□ 0.48
RNF40-206ENST00000564260 TCF25Q9BQ70 676 aa18.07■□□□□ 0.48
RNF40-206ENST00000564260 OXCT2Q9BYC2 517 aaPredicted RBP18.07■□□□□ 0.48
RNF40-206ENST00000564260 TDRD15B5MCY1 1934 aaKnown RBP18.07■□□□□ 0.48
RNF40-206ENST00000564260 ANO9A1A5B4 782 aa18.06■□□□□ 0.48
RNF40-206ENST00000564260 NT5C1B-RDH14C9J2C7 533 aa18.06■□□□□ 0.48
RNF40-206ENST00000564260 RFXAPO00287 272 aa18.06■□□□□ 0.48
RNF40-206ENST00000564260 IKBKBO14920 756 aa18.06■□□□□ 0.48
RNF40-206ENST00000564260 SYN3O14994 580 aa18.06■□□□□ 0.48
RNF40-206ENST00000564260 KIF4AO95239 1232 aa18.06■□□□□ 0.48
RNF40-206ENST00000564260 URODP06132 367 aa18.06■□□□□ 0.48
RNF40-206ENST00000564260 NFICP08651 508 aa18.06■□□□□ 0.48
RNF40-206ENST00000564260 PSMC2P35998 433 aaKnown RBP18.06■□□□□ 0.48
RNF40-206ENST00000564260 AARSP49588 968 aaKnown RBP eCLIP18.06■□□□□ 0.48
RNF40-206ENST00000564260 DSG1Q02413 1049 aa18.06■□□□□ 0.48
RNF40-206ENST00000564260 SOX4Q06945 474 aaPredicted RBP18.06■□□□□ 0.48
RNF40-206ENST00000564260 ADAM9Q13443 819 aa18.06■□□□□ 0.48
RNF40-206ENST00000564260 CCDC183Q5T5S1 534 aa18.06■□□□□ 0.48
RNF40-206ENST00000564260 SMYD4Q8IYR2 804 aaPredicted RBP18.06■□□□□ 0.48
RNF40-206ENST00000564260 LRRC52Q8N7C0 313 aa18.06■□□□□ 0.48
RNF40-206ENST00000564260 MRPL43Q8N983 215 aaKnown RBP18.06■□□□□ 0.48
RNF40-206ENST00000564260 ERCC4Q92889 916 aaPredicted RBP18.06■□□□□ 0.48
RNF40-206ENST00000564260 C18orf25Q96B23 403 aaPredicted RBP18.06■□□□□ 0.48
RNF40-206ENST00000564260 ZNF560Q96MR9 790 aa18.06■□□□□ 0.48
RNF40-206ENST00000564260 CEP63Q96MT8 703 aa18.06■□□□□ 0.48
RNF40-206ENST00000564260 CXCL16Q9H2A7 254 aa18.06■□□□□ 0.48
RNF40-206ENST00000564260 ENTPD7Q9NQZ7 604 aa18.06■□□□□ 0.48
RNF40-206ENST00000564260 MRPL17Q9NRX2 175 aaKnown RBP18.06■□□□□ 0.48
RNF40-206ENST00000564260 INTS13Q9NVM9 706 aa18.06■□□□□ 0.48
RNF40-206ENST00000564260 MAPK8IP1Q9UQF2 711 aa18.06■□□□□ 0.48
RNF40-206ENST00000564260 GOLGA8IPA6NC78 632 aa18.05■□□□□ 0.48
RNF40-206ENST00000564260 GOLGA8JA6NMD2 632 aa18.05■□□□□ 0.48
RNF40-206ENST00000564260 PIRO00625 290 aa18.05■□□□□ 0.48
RNF40-206ENST00000564260 FGFR1OPO95684 399 aaKnown RBP18.05■□□□□ 0.48
RNF40-206ENST00000564260 TNNC2P02585 160 aa18.05■□□□□ 0.48
RNF40-206ENST00000564260 TMEM191BP0C7N4 346 aa18.05■□□□□ 0.48
RNF40-206ENST00000564260 PRKCSHP14314 528 aaPredicted RBP18.05■□□□□ 0.48
RNF40-206ENST00000564260 BMP6P22004 513 aa18.05■□□□□ 0.48
RNF40-206ENST00000564260 DNAJB1P25685 340 aa18.05■□□□□ 0.48
RNF40-206ENST00000564260 GLUD2P49448 558 aa18.05■□□□□ 0.48
RNF40-206ENST00000564260 PAK1Q13153 545 aa18.05■□□□□ 0.48
RNF40-206ENST00000564260 COL19A1Q14993 1142 aa18.05■□□□□ 0.48
RNF40-206ENST00000564260 PPFIBP1Q86W92 1011 aa18.05■□□□□ 0.48
RNF40-206ENST00000564260 EFCAB13Q8IY85 973 aa18.05■□□□□ 0.48
RNF40-206ENST00000564260 PARD3BQ8TEW8 1205 aa18.05■□□□□ 0.48
RNF40-206ENST00000564260 BCL7CQ8WUZ0 217 aaPredicted RBP18.05■□□□□ 0.48
RNF40-206ENST00000564260 CGRRF1Q99675 332 aa18.05■□□□□ 0.48
RNF40-206ENST00000564260 DPP3Q9NY33 737 aa18.05■□□□□ 0.48
RNF40-206ENST00000564260 TUBGCP4Q9UGJ1 667 aa18.05■□□□□ 0.48
RNF40-206ENST00000564260 R3HCC1Q9Y3T6 440 aaKnown RBP18.05■□□□□ 0.48
RNF40-206ENST00000564260 NUB1Q9Y5A7 615 aa18.05■□□□□ 0.48
RNF40-206ENST00000564260 PPP1R3GB7ZBB8 358 aa18.04■□□□□ 0.48
RNF40-206ENST00000564260 GNA14O95837 355 aa18.04■□□□□ 0.48
RNF40-206ENST00000564260 EPB41P11171 864 aaKnown RBP18.04■□□□□ 0.48
RNF40-206ENST00000564260 KLHL40Q2TBA0 621 aa18.04■□□□□ 0.48
RNF40-206ENST00000564260 C9orf57Q5W0N0 161 aa18.04■□□□□ 0.48
RNF40-206ENST00000564260 KIAA1841Q6NSI8 718 aa18.04■□□□□ 0.48
RNF40-206ENST00000564260 APPL2Q8NEU8 664 aa18.04■□□□□ 0.48
RNF40-206ENST00000564260 SPATA18Q8TC71 538 aa18.04■□□□□ 0.48
RNF40-206ENST00000564260 MICAL1Q8TDZ2 1067 aa18.04■□□□□ 0.48
RNF40-206ENST00000564260 SUSD3Q96L08 255 aa18.04■□□□□ 0.48
RNF40-206ENST00000564260 PAAF1Q9BRP4 392 aa18.04■□□□□ 0.48
RNF40-206ENST00000564260 TTPALQ9BTX7 342 aa18.04■□□□□ 0.48
RNF40-206ENST00000564260 EMILIN2Q9BXX0 1053 aa18.04■□□□□ 0.48
RNF40-206ENST00000564260 RXFP1Q9HBX9 757 aa18.04■□□□□ 0.48
RNF40-206ENST00000564260 METTL14Q9HCE5 456 aaKnown RBP18.04■□□□□ 0.48
RNF40-206ENST00000564260 PDE11AQ9HCR9 933 aa18.04■□□□□ 0.48
RNF40-206ENST00000564260 FNIP2Q9P278 1114 aa18.04■□□□□ 0.48
RNF40-206ENST00000564260 DPP7Q9UHL4 492 aa18.04■□□□□ 0.48
RNF40-206ENST00000564260 RWDD2AQ9UIY3 292 aa18.04■□□□□ 0.48
RNF40-206ENST00000564260 M0QZQ0 153 aa18.03■□□□□ 0.48
RNF40-206ENST00000564260 STX10O60499 249 aa18.03■□□□□ 0.48
RNF40-206ENST00000564260 LILRB3O75022 631 aa18.03■□□□□ 0.48
RNF40-206ENST00000564260 SRGAP2BP0DMP2 458 aa18.03■□□□□ 0.48
RNF40-206ENST00000564260 KRT13P13646 458 aa18.03■□□□□ 0.48
RNF40-206ENST00000564260 FGFR3P22607 806 aa18.03■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms