RNA–Protein interactions for RNA: ENST00000563219.1

SHCBP1-202, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 3

Gene SHCBP1, Length 485 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-202ENST00000563219 DMRT1Q9Y5R6 373 aa4.17□□□□□ -1.74
SHCBP1-202ENST00000563219 CXorf49A8MYA2 514 aaPredicted RBP4.16□□□□□ -1.74
SHCBP1-202ENST00000563219 FOXN1O15353 648 aa4.16□□□□□ -1.74
SHCBP1-202ENST00000563219 RAMP2O60895 175 aa4.16□□□□□ -1.74
SHCBP1-202ENST00000563219 DDCP20711 480 aa4.16□□□□□ -1.74
SHCBP1-202ENST00000563219 FPR1P21462 350 aa4.16□□□□□ -1.74
SHCBP1-202ENST00000563219 IL12RB1P42701 662 aa4.16□□□□□ -1.74
SHCBP1-202ENST00000563219 CTXN1P60606 82 aa4.16□□□□□ -1.74
SHCBP1-202ENST00000563219 TLE1Q04724 770 aa4.16□□□□□ -1.74
SHCBP1-202ENST00000563219 BMT2Q1RMZ1 405 aa4.16□□□□□ -1.74
SHCBP1-202ENST00000563219 GFOD2Q3B7J2 385 aa4.16□□□□□ -1.74
SHCBP1-202ENST00000563219 KRTAP15-1Q3LI76 137 aa4.16□□□□□ -1.74
SHCBP1-202ENST00000563219 DCAF17Q5H9S7 520 aaPredicted RBP4.16□□□□□ -1.74
SHCBP1-202ENST00000563219 RABL3Q5HYI8 236 aa4.16□□□□□ -1.74
SHCBP1-202ENST00000563219 SYCP2LQ5T4T6 812 aa4.16□□□□□ -1.74
SHCBP1-202ENST00000563219 THEMIS2Q5TEJ8 643 aa4.16□□□□□ -1.74
SHCBP1-202ENST00000563219 C1QL3Q5VWW1 255 aa4.16□□□□□ -1.74
SHCBP1-202ENST00000563219 NAIF1Q69YI7 327 aaPredicted RBP4.16□□□□□ -1.74
SHCBP1-202ENST00000563219 SEM1Q6ZVN7 128 aa4.16□□□□□ -1.74
SHCBP1-202ENST00000563219 MRGPREQ86SM8 312 aa4.16□□□□□ -1.74
SHCBP1-202ENST00000563219 RSPH3Q86UC2 560 aa4.16□□□□□ -1.74
SHCBP1-202ENST00000563219 FAM83AQ86UY5 434 aa4.16□□□□□ -1.74
SHCBP1-202ENST00000563219 ZNF575Q86XF7 245 aa4.16□□□□□ -1.74
SHCBP1-202ENST00000563219 PLXDC1Q8IUK5 500 aa4.16□□□□□ -1.74
SHCBP1-202ENST00000563219 CCAR1Q8IX12 1150 aaKnown RBP4.16□□□□□ -1.74
SHCBP1-202ENST00000563219 GRAMD1CQ8IYS0 662 aa4.16□□□□□ -1.74
SHCBP1-202ENST00000563219 OR52N2Q8NGI0 321 aa4.16□□□□□ -1.74
SHCBP1-202ENST00000563219 ATXN2LQ8WWM7 1075 aaKnown RBP4.16□□□□□ -1.74
SHCBP1-202ENST00000563219 ST8SIA2Q92186 375 aa4.16□□□□□ -1.74
SHCBP1-202ENST00000563219 HAS1Q92839 578 aa4.16□□□□□ -1.74
SHCBP1-202ENST00000563219 TMX3Q96JJ7 454 aa4.16□□□□□ -1.74
SHCBP1-202ENST00000563219 CLPTM1LQ96KA5 538 aa4.16□□□□□ -1.74
SHCBP1-202ENST00000563219 AGAP2Q99490 1192 aa4.16□□□□□ -1.74
SHCBP1-202ENST00000563219 LDAHQ9H6V9 325 aa4.16□□□□□ -1.74
SHCBP1-202ENST00000563219 GEMIN8Q9NWZ8 242 aaKnown RBP4.16□□□□□ -1.74
SHCBP1-202ENST00000563219 POLHQ9Y253 713 aa4.16□□□□□ -1.74
SHCBP1-202ENST00000563219 ACTL7AQ9Y615 435 aa4.16□□□□□ -1.74
SHCBP1-202ENST00000563219 TMEM191CA6NGB0 347 aa4.15□□□□□ -1.75
SHCBP1-202ENST00000563219 TBKBP1A7MCY6 615 aa4.15□□□□□ -1.75
SHCBP1-202ENST00000563219 VSTM5A8MXK1 200 aa4.15□□□□□ -1.75
SHCBP1-202ENST00000563219 H3BML4 177 aa4.15□□□□□ -1.75
SHCBP1-202ENST00000563219 FAM20BO75063 409 aa4.15□□□□□ -1.75
SHCBP1-202ENST00000563219 RPS6KA4O75676 772 aa4.15□□□□□ -1.75
SHCBP1-202ENST00000563219 IPO13O94829 963 aaKnown RBP4.15□□□□□ -1.75
SHCBP1-202ENST00000563219 ARIH2O95376 493 aa4.15□□□□□ -1.75
SHCBP1-202ENST00000563219 KRT18P05783 430 aaKnown RBP4.15□□□□□ -1.75
SHCBP1-202ENST00000563219 SNRPA1P09661 255 aaKnown RBP4.15□□□□□ -1.75
SHCBP1-202ENST00000563219 MYBP10242 640 aa4.15□□□□□ -1.75
SHCBP1-202ENST00000563219 GNAT2P19087 354 aa4.15□□□□□ -1.75
SHCBP1-202ENST00000563219 PTGS2P35354 604 aa4.15□□□□□ -1.75
SHCBP1-202ENST00000563219 ALDH1A3P47895 512 aa4.15□□□□□ -1.75
SHCBP1-202ENST00000563219 HK3P52790 923 aa4.15□□□□□ -1.75
SHCBP1-202ENST00000563219 RHBDL3P58872 404 aa4.15□□□□□ -1.75
SHCBP1-202ENST00000563219 GBX1Q14549 363 aa4.15□□□□□ -1.75
SHCBP1-202ENST00000563219 CSRP2Q16527 193 aa4.15□□□□□ -1.75
SHCBP1-202ENST00000563219 DACT2Q5SW24 774 aa4.15□□□□□ -1.75
SHCBP1-202ENST00000563219 AFMIDQ63HM1 303 aa4.15□□□□□ -1.75
SHCBP1-202ENST00000563219 LAIR1Q6GTX8 287 aa4.15□□□□□ -1.75
SHCBP1-202ENST00000563219 DRICH1Q6PGQ1 229 aaPredicted RBP4.15□□□□□ -1.75
SHCBP1-202ENST00000563219 EXOC8Q8IYI6 725 aa4.15□□□□□ -1.75
SHCBP1-202ENST00000563219 C3orf20Q8ND61 904 aa4.15□□□□□ -1.75
SHCBP1-202ENST00000563219 FBXO18Q8NFZ0 1043 aa4.15□□□□□ -1.75
SHCBP1-202ENST00000563219 SLC35B2Q8TB61 432 aa4.15□□□□□ -1.75
SHCBP1-202ENST00000563219 SLC25A43Q8WUT9 341 aaPredicted RBP4.15□□□□□ -1.75
SHCBP1-202ENST00000563219 STON2Q8WXE9 905 aa4.15□□□□□ -1.75
SHCBP1-202ENST00000563219 RGMAQ96B86 450 aa4.15□□□□□ -1.75
SHCBP1-202ENST00000563219 TIFAQ96CG3 184 aa4.15□□□□□ -1.75
SHCBP1-202ENST00000563219 FAM193BQ96PV7 902 aaPredicted RBP4.15□□□□□ -1.75
SHCBP1-202ENST00000563219 MPHOSPH6Q99547 160 aaKnown RBP4.15□□□□□ -1.75
SHCBP1-202ENST00000563219 TTPALQ9BTX7 342 aa4.15□□□□□ -1.75
SHCBP1-202ENST00000563219 EPC1Q9H2F5 836 aa4.15□□□□□ -1.75
SHCBP1-202ENST00000563219 NRDE2Q9H7Z3 1164 aa4.15□□□□□ -1.75
SHCBP1-202ENST00000563219 KMT5AQ9NQR1 393 aa4.15□□□□□ -1.75
SHCBP1-202ENST00000563219 MAN1C1Q9NR34 630 aa4.15□□□□□ -1.75
SHCBP1-202ENST00000563219 SLC23A1Q9UHI7 598 aa4.15□□□□□ -1.75
SHCBP1-202ENST00000563219 CLCA2Q9UQC9 943 aa4.15□□□□□ -1.75
SHCBP1-202ENST00000563219 GRXCR1A8MXD5 290 aa4.14□□□□□ -1.75
SHCBP1-202ENST00000563219 PRR5-ARHGAP8B1AHC4 643 aa4.14□□□□□ -1.75
SHCBP1-202ENST00000563219 KIF3BO15066 747 aa4.14□□□□□ -1.75
SHCBP1-202ENST00000563219 ALDH2P05091 517 aa4.14□□□□□ -1.75
SHCBP1-202ENST00000563219 FTH1P19P0C7X4 201 aa4.14□□□□□ -1.75
SHCBP1-202ENST00000563219 RAP2AP10114 183 aa4.14□□□□□ -1.75
SHCBP1-202ENST00000563219 MALP21145 153 aa4.14□□□□□ -1.75
SHCBP1-202ENST00000563219 MAP2K6P52564 334 aa4.14□□□□□ -1.75
SHCBP1-202ENST00000563219 CLRN1P58418 232 aa4.14□□□□□ -1.75
SHCBP1-202ENST00000563219 NANOS3P60323 173 aaKnown RBP4.14□□□□□ -1.75
SHCBP1-202ENST00000563219 NOGQ13253 232 aa4.14□□□□□ -1.75
SHCBP1-202ENST00000563219 VPS72Q15906 364 aa4.14□□□□□ -1.75
SHCBP1-202ENST00000563219 ANKS6Q68DC2 871 aa4.14□□□□□ -1.75
SHCBP1-202ENST00000563219 RHOUQ7L0Q8 258 aa4.14□□□□□ -1.75
SHCBP1-202ENST00000563219 XYLT1Q86Y38 959 aa4.14□□□□□ -1.75
SHCBP1-202ENST00000563219 DENND1CQ8IV53 801 aa4.14□□□□□ -1.75
SHCBP1-202ENST00000563219 ZNF276Q8N554 614 aa4.14□□□□□ -1.75
SHCBP1-202ENST00000563219 DCBLD1Q8N8Z6 715 aa4.14□□□□□ -1.75
SHCBP1-202ENST00000563219 RAB24Q969Q5 203 aa4.14□□□□□ -1.75
SHCBP1-202ENST00000563219 LENG9Q96B70 501 aa4.14□□□□□ -1.75
SHCBP1-202ENST00000563219 ZG16BQ96DA0 208 aa4.14□□□□□ -1.75
SHCBP1-202ENST00000563219 PGBD4Q96DM1 585 aa4.14□□□□□ -1.75
SHCBP1-202ENST00000563219 FAM167AQ96KS9 214 aa4.14□□□□□ -1.75
SHCBP1-202ENST00000563219 ACO2Q99798 780 aaKnown RBP4.14□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms