RNA–Protein interactions for RNA: ENST00000563130.5

CNOT1-204, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 2

Gene CNOT1, Length 2,280 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-204ENST00000563130 STXBP4Q6ZWJ1 553 aa6.75□□□□□ -1.33
CNOT1-204ENST00000563130 KIAA0895Q8NCT3 520 aa6.75□□□□□ -1.33
CNOT1-204ENST00000563130 SPATA20Q8TB22 786 aa6.75□□□□□ -1.33
CNOT1-204ENST00000563130 RPS6KC1Q96S38 1066 aa6.75□□□□□ -1.33
CNOT1-204ENST00000563130 USB1Q9BQ65 265 aaKnown RBP6.75□□□□□ -1.33
CNOT1-204ENST00000563130 PLEKHA5Q9HAU0 1116 aa6.75□□□□□ -1.33
CNOT1-204ENST00000563130 MARCH5Q9NX47 278 aa6.75□□□□□ -1.33
CNOT1-204ENST00000563130 UBE4BO95155 1302 aa6.75□□□□□ -1.33
CNOT1-204ENST00000563130 FSCN2O14926 492 aa6.74□□□□□ -1.33
CNOT1-204ENST00000563130 TGFB1I1O43294 461 aa6.74□□□□□ -1.33
CNOT1-204ENST00000563130 RHOBTB3O94955 611 aa6.74□□□□□ -1.33
CNOT1-204ENST00000563130 RPN1P04843 607 aaKnown RBP6.74□□□□□ -1.33
CNOT1-204ENST00000563130 HARSP12081 509 aaKnown RBP6.74□□□□□ -1.33
CNOT1-204ENST00000563130 GARTP22102 1010 aa6.74□□□□□ -1.33
CNOT1-204ENST00000563130 IRS1P35568 1242 aa6.74□□□□□ -1.33
CNOT1-204ENST00000563130 YARSP54577 528 aaKnown RBP6.74□□□□□ -1.33
CNOT1-204ENST00000563130 ERVFC1P60507 584 aa6.74□□□□□ -1.33
CNOT1-204ENST00000563130 KCNB1Q14721 858 aa6.74□□□□□ -1.33
CNOT1-204ENST00000563130 COL19A1Q14993 1142 aa6.74□□□□□ -1.33
CNOT1-204ENST00000563130 POSTNQ15063 836 aa6.74□□□□□ -1.33
CNOT1-204ENST00000563130 ZBTB6Q15916 424 aa6.74□□□□□ -1.33
CNOT1-204ENST00000563130 ENOX2Q16206 610 aaKnown RBP6.74□□□□□ -1.33
CNOT1-204ENST00000563130 MSS51Q4VC12 460 aa6.74□□□□□ -1.33
CNOT1-204ENST00000563130 GLRA4Q5JXX5 417 aa6.74□□□□□ -1.33
CNOT1-204ENST00000563130 CRELD2Q6UXH1 353 aaPredicted RBP6.74□□□□□ -1.33
CNOT1-204ENST00000563130 DDX53Q86TM3 631 aaKnown RBP6.74□□□□□ -1.33
CNOT1-204ENST00000563130 MAFAQ8NHW3 353 aaPredicted RBP6.74□□□□□ -1.33
CNOT1-204ENST00000563130 TMEM174Q8WUU8 243 aa6.74□□□□□ -1.33
CNOT1-204ENST00000563130 FAM193BQ96PV7 902 aaPredicted RBP6.74□□□□□ -1.33
CNOT1-204ENST00000563130 PAAF1Q9BRP4 392 aa6.74□□□□□ -1.33
CNOT1-204ENST00000563130 MSTO1Q9BUK6 570 aa6.74□□□□□ -1.33
CNOT1-204ENST00000563130 VN1R3Q9BXE9 311 aa6.74□□□□□ -1.33
CNOT1-204ENST00000563130 GBP3Q9H0R5 595 aa6.74□□□□□ -1.33
CNOT1-204ENST00000563130 SLC39A2Q9NP94 309 aa6.74□□□□□ -1.33
CNOT1-204ENST00000563130 TLR9Q9NR96 1032 aa6.74□□□□□ -1.33
CNOT1-204ENST00000563130 AGO2Q9UKV8 859 aaKnown RBP6.74□□□□□ -1.33
CNOT1-204ENST00000563130 PCDHGC3Q9UN70 934 aa6.74□□□□□ -1.33
CNOT1-204ENST00000563130 FAN1Q9Y2M0 1017 aa6.74□□□□□ -1.33
CNOT1-204ENST00000563130 IRAK3Q9Y616 596 aa6.74□□□□□ -1.33
CNOT1-204ENST00000563130 PLXNA4Q9HCM2 1894 aa6.74□□□□□ -1.33
CNOT1-204ENST00000563130 PRUNE2Q8WUY3 3088 aa6.74□□□□□ -1.33
CNOT1-204ENST00000563130 CXCL8P10145 99 aa6.74□□□□□ -1.33
CNOT1-204ENST00000563130 UBE2HP62256 183 aa6.74□□□□□ -1.33
CNOT1-204ENST00000563130 SNRPFP62306 86 aaKnown RBP6.74□□□□□ -1.33
CNOT1-204ENST00000563130 KRT17Q04695 432 aa6.74□□□□□ -1.33
CNOT1-204ENST00000563130 SOX4Q06945 474 aaPredicted RBP6.74□□□□□ -1.33
CNOT1-204ENST00000563130 TUSC1Q2TAM9 212 aa6.74□□□□□ -1.33
CNOT1-204ENST00000563130 TIGD5Q53EQ6 642 aa6.74□□□□□ -1.33
CNOT1-204ENST00000563130 PDE12Q6L8Q7 609 aaKnown RBP6.74□□□□□ -1.33
CNOT1-204ENST00000563130 POMGNT1Q8WZA1 660 aa6.74□□□□□ -1.33
CNOT1-204ENST00000563130 TMEM169Q96HH4 297 aa6.74□□□□□ -1.33
CNOT1-204ENST00000563130 CCDC34Q96HJ3 373 aa6.74□□□□□ -1.33
CNOT1-204ENST00000563130 FBXL18Q96ME1 805 aa6.74□□□□□ -1.33
CNOT1-204ENST00000563130 TSPAN18Q96SJ8 248 aa6.74□□□□□ -1.33
CNOT1-204ENST00000563130 CBWD1Q9BRT8 395 aa6.74□□□□□ -1.33
CNOT1-204ENST00000563130 NSUN3Q9H649 340 aaKnown RBP6.74□□□□□ -1.33
CNOT1-204ENST00000563130 PUF60Q9UHX1 559 aaKnown RBP6.74□□□□□ -1.33
CNOT1-204ENST00000563130 REV3LO60673 3130 aa6.74□□□□□ -1.33
CNOT1-204ENST00000563130 MYO7AQ13402 2215 aa6.73□□□□□ -1.33
CNOT1-204ENST00000563130 TDRD15B5MCY1 1934 aaKnown RBP6.73□□□□□ -1.33
CNOT1-204ENST00000563130 ATG2AQ2TAZ0 1938 aa6.73□□□□□ -1.33
CNOT1-204ENST00000563130 XIRP2A4UGR9 3374 aa6.73□□□□□ -1.33
CNOT1-204ENST00000563130 F8W810 466 aa6.73□□□□□ -1.33
CNOT1-204ENST00000563130 TMEM189-UBE2V1I3L0A0 370 aa6.73□□□□□ -1.33
CNOT1-204ENST00000563130 KIAA0391O15091 583 aaKnown RBP6.73□□□□□ -1.33
CNOT1-204ENST00000563130 S1PR4O95977 384 aa6.73□□□□□ -1.33
CNOT1-204ENST00000563130 OR1G1P47890 313 aa6.73□□□□□ -1.33
CNOT1-204ENST00000563130 ACOT2P49753 483 aa6.73□□□□□ -1.33
CNOT1-204ENST00000563130 UPP1Q16831 310 aa6.73□□□□□ -1.33
CNOT1-204ENST00000563130 KNOP1Q1ED39 458 aaKnown RBP6.73□□□□□ -1.33
CNOT1-204ENST00000563130 CD300LGQ6UXG3 332 aa6.73□□□□□ -1.33
CNOT1-204ENST00000563130 RETREG3Q86VR2 466 aa6.73□□□□□ -1.33
CNOT1-204ENST00000563130 CD302Q8IX05 232 aa6.73□□□□□ -1.33
CNOT1-204ENST00000563130 C12orf56Q8IXR9 622 aa6.73□□□□□ -1.33
CNOT1-204ENST00000563130 SYCP3Q8IZU3 236 aa6.73□□□□□ -1.33
CNOT1-204ENST00000563130 FAM160A2Q8N612 972 aaPredicted RBP6.73□□□□□ -1.33
CNOT1-204ENST00000563130 ZSWIM2Q8NEG5 633 aa6.73□□□□□ -1.33
CNOT1-204ENST00000563130 ZBP1Q9H171 429 aa6.73□□□□□ -1.33
CNOT1-204ENST00000563130 KCTD10Q9H3F6 313 aa6.73□□□□□ -1.33
CNOT1-204ENST00000563130 ASB7Q9H672 318 aa6.73□□□□□ -1.33
CNOT1-204ENST00000563130 NGRNQ9NPE2 291 aaKnown RBP6.73□□□□□ -1.33
CNOT1-204ENST00000563130 AGPAT3Q9NRZ7 376 aa6.73□□□□□ -1.33
CNOT1-204ENST00000563130 EXOC1Q9NV70 894 aa6.73□□□□□ -1.33
CNOT1-204ENST00000563130 SLC38A7Q9NVC3 462 aa6.73□□□□□ -1.33
CNOT1-204ENST00000563130 CACNG4Q9UBN1 327 aa6.73□□□□□ -1.33
CNOT1-204ENST00000563130 STK39Q9UEW8 545 aa6.73□□□□□ -1.33
CNOT1-204ENST00000563130 PRG3Q9Y2Y8 225 aaPredicted RBP6.73□□□□□ -1.33
CNOT1-204ENST00000563130 TRIP11Q15643 1979 aa6.73□□□□□ -1.33
CNOT1-204ENST00000563130 CITO14578 2027 aa6.73□□□□□ -1.33
CNOT1-204ENST00000563130 CASTOR2A6NHX0 329 aa6.73□□□□□ -1.33
CNOT1-204ENST00000563130 LACTBL1A8MY62 500 aa6.73□□□□□ -1.33
CNOT1-204ENST00000563130 LILRB3O75022 631 aa6.73□□□□□ -1.33
CNOT1-204ENST00000563130 PRPF40AO75400 957 aaKnown RBP6.73□□□□□ -1.33
CNOT1-204ENST00000563130 LDHAP00338 332 aaKnown RBP6.73□□□□□ -1.33
CNOT1-204ENST00000563130 SOD2P04179 222 aa6.73□□□□□ -1.33
CNOT1-204ENST00000563130 CTSAP10619 480 aa6.73□□□□□ -1.33
CNOT1-204ENST00000563130 CYP3A5P20815 502 aa6.73□□□□□ -1.33
CNOT1-204ENST00000563130 IGFBP6P24592 240 aaPredicted RBP6.73□□□□□ -1.33
CNOT1-204ENST00000563130 MATR3P43243 847 aaKnown RBP eCLIP6.73□□□□□ -1.33
CNOT1-204ENST00000563130 PNOCQ13519 176 aa6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms