RNA–Protein interactions for RNA: ENST00000562626.1

CLK3-208, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 812 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-208ENST00000562626 ZNF558Q96NG5 402 aa10.62□□□□□ -0.71
CLK3-208ENST00000562626 FUCA2Q9BTY2 467 aa10.62□□□□□ -0.71
CLK3-208ENST00000562626 PLEKHA5Q9HAU0 1116 aa10.62□□□□□ -0.71
CLK3-208ENST00000562626 CGNQ9P2M7 1197 aaKnown RBP10.62□□□□□ -0.71
CLK3-208ENST00000562626 KANSL3Q9P2N6 904 aa10.62□□□□□ -0.71
CLK3-208ENST00000562626 SIX4Q9UIU6 781 aa10.62□□□□□ -0.71
CLK3-208ENST00000562626 ZNF638Q14966 1978 aaKnown RBP10.62□□□□□ -0.71
CLK3-208ENST00000562626 NOTCH4Q99466 2003 aa10.62□□□□□ -0.71
CLK3-208ENST00000562626 TMEM265A0A087WTH1 108 aa10.61□□□□□ -0.71
CLK3-208ENST00000562626 SYCE3A1L190 88 aa10.61□□□□□ -0.71
CLK3-208ENST00000562626 ZNF233A6NK53 670 aa10.61□□□□□ -0.71
CLK3-208ENST00000562626 LRRIQ3A6PVS8 624 aaPredicted RBP10.61□□□□□ -0.71
CLK3-208ENST00000562626 KIAA0391O15091 583 aaKnown RBP10.61□□□□□ -0.71
CLK3-208ENST00000562626 SPTLC1O15269 473 aa10.61□□□□□ -0.71
CLK3-208ENST00000562626 LRRN2O75325 713 aa10.61□□□□□ -0.71
CLK3-208ENST00000562626 LDHAP00338 332 aaKnown RBP10.61□□□□□ -0.71
CLK3-208ENST00000562626 TRIM49P0CI25 452 aa10.61□□□□□ -0.71
CLK3-208ENST00000562626 TRIM49CP0CI26 452 aa10.61□□□□□ -0.71
CLK3-208ENST00000562626 BRCC3P46736 316 aa10.61□□□□□ -0.71
CLK3-208ENST00000562626 TFAMQ00059 246 aaKnown RBP10.61□□□□□ -0.71
CLK3-208ENST00000562626 PAK1Q13153 545 aa10.61□□□□□ -0.71
CLK3-208ENST00000562626 ADAM9Q13443 819 aa10.61□□□□□ -0.71
CLK3-208ENST00000562626 HSP90AA2PQ14568 343 aaPredicted RBP10.61□□□□□ -0.71
CLK3-208ENST00000562626 TMEM132DQ14C87 1099 aa10.61□□□□□ -0.71
CLK3-208ENST00000562626 PSMD6Q15008 389 aa10.61□□□□□ -0.71
CLK3-208ENST00000562626 KYAT1Q16773 422 aa10.61□□□□□ -0.71
CLK3-208ENST00000562626 SPATA1Q5VX52 437 aa10.61□□□□□ -0.71
CLK3-208ENST00000562626 IRF2BP1Q8IU81 584 aa10.61□□□□□ -0.71
CLK3-208ENST00000562626 GOLGA5Q8TBA6 731 aa10.61□□□□□ -0.71
CLK3-208ENST00000562626 PARD3BQ8TEW8 1205 aa10.61□□□□□ -0.71
CLK3-208ENST00000562626 AUTS2Q8WXX7 1259 aa10.61□□□□□ -0.71
CLK3-208ENST00000562626 FAM193BQ96PV7 902 aaPredicted RBP10.61□□□□□ -0.71
CLK3-208ENST00000562626 CDX2Q99626 313 aaPredicted RBP10.61□□□□□ -0.71
CLK3-208ENST00000562626 TMEM175Q9BSA9 504 aa10.61□□□□□ -0.71
CLK3-208ENST00000562626 GPR62Q9BZJ7 368 aa10.61□□□□□ -0.71
CLK3-208ENST00000562626 MTMR12Q9C0I1 747 aa10.61□□□□□ -0.71
CLK3-208ENST00000562626 ASB7Q9H672 318 aa10.61□□□□□ -0.71
CLK3-208ENST00000562626 INTS13Q9NVM9 706 aa10.61□□□□□ -0.71
CLK3-208ENST00000562626 MTMR10Q9NXD2 777 aa10.61□□□□□ -0.71
CLK3-208ENST00000562626 FAN1Q9Y2M0 1017 aa10.61□□□□□ -0.71
CLK3-208ENST00000562626 DENND4AQ7Z401 1863 aa10.6□□□□□ -0.71
CLK3-208ENST00000562626 ANO9A1A5B4 782 aa10.6□□□□□ -0.71
CLK3-208ENST00000562626 PODXLO00592 558 aa10.6□□□□□ -0.71
CLK3-208ENST00000562626 PSMA7O14818 248 aa10.6□□□□□ -0.71
CLK3-208ENST00000562626 KIF20AO95235 890 aa10.6□□□□□ -0.71
CLK3-208ENST00000562626 IL18RAPO95256 599 aa10.6□□□□□ -0.71
CLK3-208ENST00000562626 RB1P06400 928 aa10.6□□□□□ -0.71
CLK3-208ENST00000562626 DLATP10515 647 aaKnown RBP10.6□□□□□ -0.71
CLK3-208ENST00000562626 LRPAP1P30533 357 aa10.6□□□□□ -0.71
CLK3-208ENST00000562626 POU5F1Q01860 360 aaKnown RBP10.6□□□□□ -0.71
CLK3-208ENST00000562626 PLCB3Q01970 1234 aa10.6□□□□□ -0.71
CLK3-208ENST00000562626 LRRC63Q05C16 580 aa10.6□□□□□ -0.71
CLK3-208ENST00000562626 TYRO3Q06418 890 aa10.6□□□□□ -0.71
CLK3-208ENST00000562626 PPP3CAQ08209 521 aa10.6□□□□□ -0.71
CLK3-208ENST00000562626 MYBPC2Q14324 1141 aa10.6□□□□□ -0.71
CLK3-208ENST00000562626 C9orf57Q5W0N0 161 aa10.6□□□□□ -0.71
CLK3-208ENST00000562626 GPR153Q6NV75 609 aa10.6□□□□□ -0.71
CLK3-208ENST00000562626 ADGRD2Q7Z7M1 963 aa10.6□□□□□ -0.71
CLK3-208ENST00000562626 FAM186BQ8IYM0 893 aa10.6□□□□□ -0.71
CLK3-208ENST00000562626 C1orf127Q8N9H9 656 aa10.6□□□□□ -0.71
CLK3-208ENST00000562626 MLKLQ8NB16 471 aa10.6□□□□□ -0.71
CLK3-208ENST00000562626 POF1BQ8WVV4 589 aa10.6□□□□□ -0.71
CLK3-208ENST00000562626 SAMD11Q96NU1 681 aa10.6□□□□□ -0.71
CLK3-208ENST00000562626 CGRRF1Q99675 332 aa10.6□□□□□ -0.71
CLK3-208ENST00000562626 PLVAPQ9BX97 442 aa10.6□□□□□ -0.71
CLK3-208ENST00000562626 DNAJC25Q9H1X3 360 aa10.6□□□□□ -0.71
CLK3-208ENST00000562626 DPP3Q9NY33 737 aa10.6□□□□□ -0.71
CLK3-208ENST00000562626 SPG21Q9NZD8 308 aa10.6□□□□□ -0.71
CLK3-208ENST00000562626 RWDD2AQ9UIY3 292 aa10.6□□□□□ -0.71
CLK3-208ENST00000562626 UBQLN1Q9UMX0 589 aaKnown RBP10.6□□□□□ -0.71
CLK3-208ENST00000562626 C2CD2Q9Y426 696 aa10.6□□□□□ -0.71
CLK3-208ENST00000562626 PCDHB12Q9Y5F1 795 aa10.6□□□□□ -0.71
CLK3-208ENST00000562626 PATJQ8NI35 1801 aa10.6□□□□□ -0.71
CLK3-208ENST00000562626 TCF20Q9UGU0 1960 aaKnown RBP10.59□□□□□ -0.71
CLK3-208ENST00000562626 PIRO00625 290 aa10.59□□□□□ -0.71
CLK3-208ENST00000562626 FSCN2O14926 492 aa10.59□□□□□ -0.71
CLK3-208ENST00000562626 ALDH2P05091 517 aa10.59□□□□□ -0.71
CLK3-208ENST00000562626 ITGB3P05106 788 aa10.59□□□□□ -0.71
CLK3-208ENST00000562626 CYP3A5P20815 502 aa10.59□□□□□ -0.71
CLK3-208ENST00000562626 ALDH7A1P49419 539 aaKnown RBP10.59□□□□□ -0.71
CLK3-208ENST00000562626 MCCD1P59942 119 aaPredicted RBP10.59□□□□□ -0.71
CLK3-208ENST00000562626 CLDN10P78369 228 aa10.59□□□□□ -0.71
CLK3-208ENST00000562626 FKBP3Q00688 224 aaKnown RBP10.59□□□□□ -0.71
CLK3-208ENST00000562626 STIM1Q13586 685 aa10.59□□□□□ -0.71
CLK3-208ENST00000562626 TIGD5Q53EQ6 642 aa10.59□□□□□ -0.71
CLK3-208ENST00000562626 HSP90AA4PQ58FG1 418 aa10.59□□□□□ -0.71
CLK3-208ENST00000562626 TDRD10Q5VZ19 366 aaKnown RBP10.59□□□□□ -0.71
CLK3-208ENST00000562626 FUT10Q6P4F1 479 aa10.59□□□□□ -0.71
CLK3-208ENST00000562626 C15orf39Q6ZRI6 1047 aa10.59□□□□□ -0.71
CLK3-208ENST00000562626 CD302Q8IX05 232 aa10.59□□□□□ -0.71
CLK3-208ENST00000562626 TSG101Q99816 390 aa10.59□□□□□ -0.71
CLK3-208ENST00000562626 C11orf84Q9BUA3 381 aaPredicted RBP10.59□□□□□ -0.71
CLK3-208ENST00000562626 SRRTQ9BXP5 876 aaKnown RBP10.59□□□□□ -0.71
CLK3-208ENST00000562626 ZBP1Q9H171 429 aa10.59□□□□□ -0.71
CLK3-208ENST00000562626 KIAA1586Q9HCI6 787 aa10.59□□□□□ -0.71
CLK3-208ENST00000562626 AAASQ9NRG9 546 aa10.59□□□□□ -0.71
CLK3-208ENST00000562626 SLC38A7Q9NVC3 462 aa10.59□□□□□ -0.71
CLK3-208ENST00000562626 ADAM28Q9UKQ2 775 aa10.59□□□□□ -0.71
CLK3-208ENST00000562626 DERAQ9Y315 318 aa10.59□□□□□ -0.71
CLK3-208ENST00000562626 RWDD3Q9Y3V2 267 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 100.3 ms