RNA–Protein interactions for RNA: ENST00000562425.1

PKD1-226, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 3

Gene PKD1, Length 608 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-226ENST00000562425 IKZF4Q9H2S9 585 aa17.83■□□□□ 0.44
PKD1-226ENST00000562425 KIAA1586Q9HCI6 787 aa17.83■□□□□ 0.44
PKD1-226ENST00000562425 DERAQ9Y315 318 aa17.83■□□□□ 0.44
PKD1-226ENST00000562425 MEFVO15553 781 aaPredicted RBP17.82■□□□□ 0.44
PKD1-226ENST00000562425 EXTL3O43909 919 aa17.82■□□□□ 0.44
PKD1-226ENST00000562425 KIF4AO95239 1232 aa17.82■□□□□ 0.44
PKD1-226ENST00000562425 CREMQ03060 361 aa17.82■□□□□ 0.44
PKD1-226ENST00000562425 SNW1Q13573 536 aaKnown RBP17.82■□□□□ 0.44
PKD1-226ENST00000562425 PTPN14Q15678 1187 aa17.82■□□□□ 0.44
PKD1-226ENST00000562425 ZBTB6Q15916 424 aa17.82■□□□□ 0.44
PKD1-226ENST00000562425 KNOP1Q1ED39 458 aaKnown RBP17.82■□□□□ 0.44
PKD1-226ENST00000562425 BMT2Q1RMZ1 405 aa17.82■□□□□ 0.44
PKD1-226ENST00000562425 PPFIBP1Q86W92 1011 aa17.82■□□□□ 0.44
PKD1-226ENST00000562425 RNF168Q8IYW5 571 aaPredicted RBP17.82■□□□□ 0.44
PKD1-226ENST00000562425 GPD1LQ8N335 351 aa17.82■□□□□ 0.44
PKD1-226ENST00000562425 BEST2Q8NFU1 509 aa17.82■□□□□ 0.44
PKD1-226ENST00000562425 GOLGA5Q8TBA6 731 aa17.82■□□□□ 0.44
PKD1-226ENST00000562425 AUTS2Q8WXX7 1259 aa17.82■□□□□ 0.44
PKD1-226ENST00000562425 FAM213AQ9BRX8 229 aa17.82■□□□□ 0.44
PKD1-226ENST00000562425 GPR62Q9BZJ7 368 aa17.82■□□□□ 0.44
PKD1-226ENST00000562425 GOLGA2P5Q9HBQ8 144 aa17.82■□□□□ 0.44
PKD1-226ENST00000562425 CD320Q9NPF0 282 aa17.82■□□□□ 0.44
PKD1-226ENST00000562425 CHST7Q9NS84 486 aa17.82■□□□□ 0.44
PKD1-226ENST00000562425 CACNG4Q9UBN1 327 aa17.82■□□□□ 0.44
PKD1-226ENST00000562425 GRXCR2A6NFK2 248 aa17.81■□□□□ 0.44
PKD1-226ENST00000562425 F8W810 466 aa17.81■□□□□ 0.44
PKD1-226ENST00000562425 PODXLO00592 558 aa17.81■□□□□ 0.44
PKD1-226ENST00000562425 KINO60870 393 aaKnown RBP17.81■□□□□ 0.44
PKD1-226ENST00000562425 RHOBTB3O94955 611 aa17.81■□□□□ 0.44
PKD1-226ENST00000562425 SMC2O95347 1197 aa17.81■□□□□ 0.44
PKD1-226ENST00000562425 SSTR3P32745 418 aaPredicted RBP17.81■□□□□ 0.44
PKD1-226ENST00000562425 GTF2F1P35269 517 aaKnown RBP eCLIP17.81■□□□□ 0.44
PKD1-226ENST00000562425 HOXD13P35453 343 aa17.81■□□□□ 0.44
PKD1-226ENST00000562425 NDUFV1P49821 464 aa17.81■□□□□ 0.44
PKD1-226ENST00000562425 DSG1Q02413 1049 aa17.81■□□□□ 0.44
PKD1-226ENST00000562425 SOX4Q06945 474 aaPredicted RBP17.81■□□□□ 0.44
PKD1-226ENST00000562425 STK4Q13043 487 aa17.81■□□□□ 0.44
PKD1-226ENST00000562425 KCNB1Q14721 858 aa17.81■□□□□ 0.44
PKD1-226ENST00000562425 TMEM132DQ14C87 1099 aa17.81■□□□□ 0.44
PKD1-226ENST00000562425 KIAA0319Q5VV43 1072 aa17.81■□□□□ 0.44
PKD1-226ENST00000562425 PDXDC1Q6P996 788 aa17.81■□□□□ 0.44
PKD1-226ENST00000562425 TAS1R1Q7RTX1 841 aa17.81■□□□□ 0.44
PKD1-226ENST00000562425 NT5DC4Q86YG4 428 aa17.81■□□□□ 0.44
PKD1-226ENST00000562425 NELFCDQ8IXH7 590 aa17.81■□□□□ 0.44
PKD1-226ENST00000562425 HASPINQ8TF76 798 aa17.81■□□□□ 0.44
PKD1-226ENST00000562425 C18orf25Q96B23 403 aaPredicted RBP17.81■□□□□ 0.44
PKD1-226ENST00000562425 SAAL1Q96ER3 474 aa17.81■□□□□ 0.44
PKD1-226ENST00000562425 CBWD1Q9BRT8 395 aa17.81■□□□□ 0.44
PKD1-226ENST00000562425 PCIF1Q9H4Z3 704 aa17.81■□□□□ 0.44
PKD1-226ENST00000562425 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP17.81■□□□□ 0.44
PKD1-226ENST00000562425 RMND1Q9NWS8 449 aa17.81■□□□□ 0.44
PKD1-226ENST00000562425 NUB1Q9Y5A7 615 aa17.81■□□□□ 0.44
PKD1-226ENST00000562425 FAM86C2PA6NEL3 165 aa17.8■□□□□ 0.44
PKD1-226ENST00000562425 C2CD2LO14523 706 aa17.8■□□□□ 0.44
PKD1-226ENST00000562425 LILRB3O75022 631 aa17.8■□□□□ 0.44
PKD1-226ENST00000562425 CLASP2O75122 1294 aaKnown RBP17.8■□□□□ 0.44
PKD1-226ENST00000562425 PRR29P0C7W0 189 aa17.8■□□□□ 0.44
PKD1-226ENST00000562425 PAX3P23760 479 aa17.8■□□□□ 0.44
PKD1-226ENST00000562425 LRPAP1P30533 357 aa17.8■□□□□ 0.44
PKD1-226ENST00000562425 SPAG1Q07617 926 aa17.8■□□□□ 0.44
PKD1-226ENST00000562425 SURF1Q15526 300 aa17.8■□□□□ 0.44
PKD1-226ENST00000562425 FAM171A1Q5VUB5 890 aa17.8■□□□□ 0.44
PKD1-226ENST00000562425 JADE1Q6IE81 842 aa17.8■□□□□ 0.44
PKD1-226ENST00000562425 CRELD2Q6UXH1 353 aaPredicted RBP17.8■□□□□ 0.44
PKD1-226ENST00000562425 TMEM184AQ6ZMB5 413 aa17.8■□□□□ 0.44
PKD1-226ENST00000562425 NOC3LQ8WTT2 800 aaKnown RBP17.8■□□□□ 0.44
PKD1-226ENST00000562425 CASP10Q92851 521 aa17.8■□□□□ 0.44
PKD1-226ENST00000562425 TTPALQ9BTX7 342 aa17.8■□□□□ 0.44
PKD1-226ENST00000562425 GTPBP4Q9BZE4 634 aaKnown RBP17.8■□□□□ 0.44
PKD1-226ENST00000562425 AGPAT3Q9NRZ7 376 aa17.8■□□□□ 0.44
PKD1-226ENST00000562425 PRKAG3Q9UGI9 489 aa17.8■□□□□ 0.44
PKD1-226ENST00000562425 C2CD2Q9Y426 696 aa17.8■□□□□ 0.44
PKD1-226ENST00000562425 CITO14578 2027 aa17.8■□□□□ 0.44
PKD1-226ENST00000562425 GOLGA8IPA6NC78 632 aa17.79■□□□□ 0.44
PKD1-226ENST00000562425 ZNF233A6NK53 670 aa17.79■□□□□ 0.44
PKD1-226ENST00000562425 GOLGA8JA6NMD2 632 aa17.79■□□□□ 0.44
PKD1-226ENST00000562425 LINC01565O15544 149 aa17.79■□□□□ 0.44
PKD1-226ENST00000562425 TGFB1I1O43294 461 aa17.79■□□□□ 0.44
PKD1-226ENST00000562425 ADH1AP07327 375 aa17.79■□□□□ 0.44
PKD1-226ENST00000562425 CNPP09543 421 aaKnown RBP17.79■□□□□ 0.44
PKD1-226ENST00000562425 IL9P15248 144 aa17.79■□□□□ 0.44
PKD1-226ENST00000562425 KLRC2P26717 231 aa17.79■□□□□ 0.44
PKD1-226ENST00000562425 UBE2HP62256 183 aa17.79■□□□□ 0.44
PKD1-226ENST00000562425 SPATA1Q5VX52 437 aa17.79■□□□□ 0.44
PKD1-226ENST00000562425 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.79■□□□□ 0.44
PKD1-226ENST00000562425 CEP57Q86XR8 500 aa17.79■□□□□ 0.44
PKD1-226ENST00000562425 BRSK2Q8IWQ3 736 aa17.79■□□□□ 0.44
PKD1-226ENST00000562425 ELOA2Q8IYF1 753 aaPredicted RBP17.79■□□□□ 0.44
PKD1-226ENST00000562425 KIAA0895Q8NCT3 520 aa17.79■□□□□ 0.44
PKD1-226ENST00000562425 CACTINQ8WUQ7 758 aaKnown RBP17.79■□□□□ 0.44
PKD1-226ENST00000562425 RIN2Q8WYP3 895 aaPredicted RBP17.79■□□□□ 0.44
PKD1-226ENST00000562425 KLHL5Q96PQ7 755 aa17.79■□□□□ 0.44
PKD1-226ENST00000562425 RXFP1Q9HBX9 757 aa17.79■□□□□ 0.44
PKD1-226ENST00000562425 RBAKQ9NYW8 714 aaPredicted RBP17.79■□□□□ 0.44
PKD1-226ENST00000562425 HSPBP1Q9NZL4 362 aa17.79■□□□□ 0.44
PKD1-226ENST00000562425 TUBGCP4Q9UGJ1 667 aa17.79■□□□□ 0.44
PKD1-226ENST00000562425 H3BQ06 376 aaPredicted RBP17.78■□□□□ 0.44
PKD1-226ENST00000562425 TULP1O00294 542 aaPredicted RBP17.78■□□□□ 0.44
PKD1-226ENST00000562425 GADD45BO75293 160 aaPredicted RBP17.78■□□□□ 0.44
PKD1-226ENST00000562425 LTBRP36941 435 aa17.78■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms