RNA–Protein interactions for RNA: ENST00000561911.5

SPG7-204, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 5

Gene SPG7, Length 1,025 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-204ENST00000561911 GOLGA2P5Q9HBQ8 144 aa16.99■□□□□ 0.31
SPG7-204ENST00000561911 DPP3Q9NY33 737 aa16.99■□□□□ 0.31
SPG7-204ENST00000561911 DNAJB4Q9UDY4 337 aa16.99■□□□□ 0.31
SPG7-204ENST00000561911 MSRAQ9UJ68 235 aa16.99■□□□□ 0.31
SPG7-204ENST00000561911 TRIOBPQ9H2D6 2365 aa16.98■□□□□ 0.31
SPG7-204ENST00000561911 LINC01553A4QN01 128 aa16.98■□□□□ 0.31
SPG7-204ENST00000561911 STX10O60499 249 aa16.98■□□□□ 0.31
SPG7-204ENST00000561911 LAG3P18627 525 aa16.98■□□□□ 0.31
SPG7-204ENST00000561911 LRPAP1P30533 357 aa16.98■□□□□ 0.31
SPG7-204ENST00000561911 GTF2H1P32780 548 aa16.98■□□□□ 0.31
SPG7-204ENST00000561911 GCLMP48507 274 aa16.98■□□□□ 0.31
SPG7-204ENST00000561911 SLC11A1P49279 550 aa16.98■□□□□ 0.31
SPG7-204ENST00000561911 SMAD3P84022 425 aaKnown RBP16.98■□□□□ 0.31
SPG7-204ENST00000561911 PPP3CAQ08209 521 aa16.98■□□□□ 0.31
SPG7-204ENST00000561911 LRIT3Q3SXY7 679 aa16.98■□□□□ 0.31
SPG7-204ENST00000561911 TCP11X2Q5H9J9 407 aa16.98■□□□□ 0.31
SPG7-204ENST00000561911 SPOUT1Q5T280 376 aaKnown RBP16.98■□□□□ 0.31
SPG7-204ENST00000561911 TRAPPC11Q7Z392 1133 aa16.98■□□□□ 0.31
SPG7-204ENST00000561911 TMEM130Q8N3G9 435 aa16.98■□□□□ 0.31
SPG7-204ENST00000561911 CLP1Q92989 425 aaKnown RBP16.98■□□□□ 0.31
SPG7-204ENST00000561911 DDX27Q96GQ7 796 aaKnown RBP16.98■□□□□ 0.31
SPG7-204ENST00000561911 CACNG4Q9UBN1 327 aa16.98■□□□□ 0.31
SPG7-204ENST00000561911 UTP18Q9Y5J1 556 aaKnown RBP eCLIP16.98■□□□□ 0.31
SPG7-204ENST00000561911 GOLGA6L19H0YKK7 550 aa16.97■□□□□ 0.31
SPG7-204ENST00000561911 PODXLO00592 558 aa16.97■□□□□ 0.31
SPG7-204ENST00000561911 ARHGEF15O94989 841 aa16.97■□□□□ 0.31
SPG7-204ENST00000561911 GALTP07902 379 aa16.97■□□□□ 0.31
SPG7-204ENST00000561911 LINC00271P0C7V0 271 aa16.97■□□□□ 0.31
SPG7-204ENST00000561911 RPL9P32969 192 aaKnown RBP16.97■□□□□ 0.31
SPG7-204ENST00000561911 OR1G1P47890 313 aa16.97■□□□□ 0.31
SPG7-204ENST00000561911 BCAR1P56945 870 aa16.97■□□□□ 0.31
SPG7-204ENST00000561911 TPM4P67936 248 aa16.97■□□□□ 0.31
SPG7-204ENST00000561911 BIRC3Q13489 604 aa16.97■□□□□ 0.31
SPG7-204ENST00000561911 TDRD10Q5VZ19 366 aaKnown RBP16.97■□□□□ 0.31
SPG7-204ENST00000561911 C15orf39Q6ZRI6 1047 aa16.97■□□□□ 0.31
SPG7-204ENST00000561911 SV2AQ7L0J3 742 aa16.97■□□□□ 0.31
SPG7-204ENST00000561911 C1orf127Q8N9H9 656 aa16.97■□□□□ 0.31
SPG7-204ENST00000561911 COLGALT1Q8NBJ5 622 aa16.97■□□□□ 0.31
SPG7-204ENST00000561911 RNF214Q8ND24 703 aa16.97■□□□□ 0.31
SPG7-204ENST00000561911 ZNF558Q96NG5 402 aa16.97■□□□□ 0.31
SPG7-204ENST00000561911 PAAF1Q9BRP4 392 aa16.97■□□□□ 0.31
SPG7-204ENST00000561911 NKX2-4Q9H2Z4 354 aa16.97■□□□□ 0.31
SPG7-204ENST00000561911 MMRN2Q9H8L6 949 aa16.97■□□□□ 0.31
SPG7-204ENST00000561911 TMEM8AQ9HCN3 771 aa16.97■□□□□ 0.31
SPG7-204ENST00000561911 AAASQ9NRG9 546 aa16.97■□□□□ 0.31
SPG7-204ENST00000561911 ITGA11Q9UKX5 1188 aa16.97■□□□□ 0.31
SPG7-204ENST00000561911 PRG3Q9Y2Y8 225 aaPredicted RBP16.97■□□□□ 0.31
SPG7-204ENST00000561911 RALGAPA2Q2PPJ7 1873 aa16.97■□□□□ 0.31
SPG7-204ENST00000561911 ANO9A1A5B4 782 aa16.96■□□□□ 0.31
SPG7-204ENST00000561911 CARNS1A5YM72 827 aa16.96■□□□□ 0.31
SPG7-204ENST00000561911 AFPP02771 609 aaKnown RBP16.96■□□□□ 0.31
SPG7-204ENST00000561911 C4BPAP04003 597 aaKnown RBP16.96■□□□□ 0.31
SPG7-204ENST00000561911 ALDH2P05091 517 aa16.96■□□□□ 0.31
SPG7-204ENST00000561911 ITGB3P05106 788 aa16.96■□□□□ 0.31
SPG7-204ENST00000561911 ATP1A3P13637 1013 aa16.96■□□□□ 0.31
SPG7-204ENST00000561911 CDK11BP21127 795 aaKnown RBP16.96■□□□□ 0.31
SPG7-204ENST00000561911 PBX3P40426 434 aa16.96■□□□□ 0.31
SPG7-204ENST00000561911 ALDH7A1P49419 539 aaKnown RBP16.96■□□□□ 0.31
SPG7-204ENST00000561911 MXI1P50539 228 aa16.96■□□□□ 0.31
SPG7-204ENST00000561911 CLCNKBP51801 687 aa16.96■□□□□ 0.31
SPG7-204ENST00000561911 KRT31Q15323 416 aa16.96■□□□□ 0.31
SPG7-204ENST00000561911 MAN2A1Q16706 1144 aa16.96■□□□□ 0.31
SPG7-204ENST00000561911 UPP1Q16831 310 aa16.96■□□□□ 0.31
SPG7-204ENST00000561911 ZACNQ401N2 412 aa16.96■□□□□ 0.31
SPG7-204ENST00000561911 C9orf57Q5W0N0 161 aa16.96■□□□□ 0.31
SPG7-204ENST00000561911 KCNT2Q6UVM3 1135 aa16.96■□□□□ 0.31
SPG7-204ENST00000561911 ANKRD20A12PQ8NF67 263 aa16.96■□□□□ 0.31
SPG7-204ENST00000561911 CXorf38Q8TB03 319 aa16.96■□□□□ 0.31
SPG7-204ENST00000561911 RABGGTAQ92696 567 aa16.96■□□□□ 0.31
SPG7-204ENST00000561911 TUBGCP2Q9BSJ2 902 aa16.96■□□□□ 0.31
SPG7-204ENST00000561911 SIX4Q9UIU6 781 aa16.96■□□□□ 0.31
SPG7-204ENST00000561911 FAN1Q9Y2M0 1017 aa16.96■□□□□ 0.31
SPG7-204ENST00000561911 RWDD3Q9Y3V2 267 aa16.96■□□□□ 0.31
SPG7-204ENST00000561911 NRP1O14786 923 aa16.95■□□□□ 0.3
SPG7-204ENST00000561911 PPEF2O14830 753 aa16.95■□□□□ 0.3
SPG7-204ENST00000561911 PHACTR2O75167 634 aa16.95■□□□□ 0.3
SPG7-204ENST00000561911 KRT19P08727 400 aa16.95■□□□□ 0.3
SPG7-204ENST00000561911 PRKCSHP14314 528 aaPredicted RBP16.95■□□□□ 0.3
SPG7-204ENST00000561911 DNAJB2P25686 324 aa16.95■□□□□ 0.3
SPG7-204ENST00000561911 POLR2BP30876 1174 aaKnown RBP16.95■□□□□ 0.3
SPG7-204ENST00000561911 FMO5P49326 533 aa16.95■□□□□ 0.3
SPG7-204ENST00000561911 RBP5P82980 135 aa16.95■□□□□ 0.3
SPG7-204ENST00000561911 TAP1Q03518 808 aa16.95■□□□□ 0.3
SPG7-204ENST00000561911 KCNH2Q12809 1159 aa16.95■□□□□ 0.3
SPG7-204ENST00000561911 KRT39Q6A163 491 aa16.95■□□□□ 0.3
SPG7-204ENST00000561911 DCLRE1AQ6PJP8 1040 aa16.95■□□□□ 0.3
SPG7-204ENST00000561911 GAS2L3Q86XJ1 694 aa16.95■□□□□ 0.3
SPG7-204ENST00000561911 SLC39A11Q8N1S5 342 aa16.95■□□□□ 0.3
SPG7-204ENST00000561911 COLEC11Q9BWP8 271 aa16.95■□□□□ 0.3
SPG7-204ENST00000561911 TAB2Q9NYJ8 693 aa16.95■□□□□ 0.3
SPG7-204ENST00000561911 LIMA1Q9UHB6 759 aaKnown RBP16.95■□□□□ 0.3
SPG7-204ENST00000561911 AGAP1Q9UPQ3 857 aa16.95■□□□□ 0.3
SPG7-204ENST00000561911 PCDHB12Q9Y5F1 795 aa16.95■□□□□ 0.3
SPG7-204ENST00000561911 CITO14578 2027 aa16.94■□□□□ 0.3
SPG7-204ENST00000561911 NT5C1B-RDH14C9J2C7 533 aa16.94■□□□□ 0.3
SPG7-204ENST00000561911 F8W810 466 aa16.94■□□□□ 0.3
SPG7-204ENST00000561911 PIRO00625 290 aa16.94■□□□□ 0.3
SPG7-204ENST00000561911 N4BP1O75113 896 aaKnown RBP16.94■□□□□ 0.3
SPG7-204ENST00000561911 KIF4AO95239 1232 aa16.94■□□□□ 0.3
SPG7-204ENST00000561911 VNN1O95497 513 aa16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms