RNA–Protein interactions for RNA: ENST00000561869.1

CHD9-204, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 2

Gene CHD9, Length 720 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-204ENST00000561869 ALG1L2C9J202 215 aa3.16□□□□□ -1.9
CHD9-204ENST00000561869 SBK3P0C264 359 aa3.16□□□□□ -1.9
CHD9-204ENST00000561869 FGFR4P22455 802 aa3.16□□□□□ -1.9
CHD9-204ENST00000561869 ADRA1BP35368 520 aa3.16□□□□□ -1.9
CHD9-204ENST00000561869 CTXN1P60606 82 aa3.16□□□□□ -1.9
CHD9-204ENST00000561869 NOMO3P69849 1222 aa3.16□□□□□ -1.9
CHD9-204ENST00000561869 GUCY1B3Q02153 619 aa3.16□□□□□ -1.9
CHD9-204ENST00000561869 SLFN5Q08AF3 891 aa3.16□□□□□ -1.9
CHD9-204ENST00000561869 IL10RAQ13651 578 aa3.16□□□□□ -1.9
CHD9-204ENST00000561869 FAM50AQ14320 339 aaKnown RBP3.16□□□□□ -1.9
CHD9-204ENST00000561869 ACAP2Q15057 778 aa3.16□□□□□ -1.9
CHD9-204ENST00000561869 C3orf36Q3SXR2 165 aa3.16□□□□□ -1.9
CHD9-204ENST00000561869 NOMO2Q5JPE7 1267 aa3.16□□□□□ -1.9
CHD9-204ENST00000561869 HECTD2Q5U5R9 776 aa3.16□□□□□ -1.9
CHD9-204ENST00000561869 ARMC6Q6NXE6 501 aa3.16□□□□□ -1.9
CHD9-204ENST00000561869 GPR149Q86SP6 731 aa3.16□□□□□ -1.9
CHD9-204ENST00000561869 RHOT1Q8IXI2 618 aa3.16□□□□□ -1.9
CHD9-204ENST00000561869 Q8NA96 180 aa3.16□□□□□ -1.9
CHD9-204ENST00000561869 IFI44Q8TCB0 444 aa3.16□□□□□ -1.9
CHD9-204ENST00000561869 RAB24Q969Q5 203 aa3.16□□□□□ -1.9
CHD9-204ENST00000561869 COA7Q96BR5 231 aa3.16□□□□□ -1.9
CHD9-204ENST00000561869 BOD1Q96IK1 185 aa3.16□□□□□ -1.9
CHD9-204ENST00000561869 MRGPRX4Q96LA9 322 aa3.16□□□□□ -1.9
CHD9-204ENST00000561869 TEKT5Q96M29 485 aa3.16□□□□□ -1.9
CHD9-204ENST00000561869 ASPSCR1Q9BZE9 553 aa3.16□□□□□ -1.9
CHD9-204ENST00000561869 SLC13A1Q9BZW2 595 aa3.16□□□□□ -1.9
CHD9-204ENST00000561869 TOR3AQ9H497 397 aa3.16□□□□□ -1.9
CHD9-204ENST00000561869 GSTO2Q9H4Y5 243 aa3.16□□□□□ -1.9
CHD9-204ENST00000561869 SYNPO2LQ9H987 977 aa3.16□□□□□ -1.9
CHD9-204ENST00000561869 TMEM74BQ9NUR3 256 aa3.16□□□□□ -1.9
CHD9-204ENST00000561869 VSX1Q9NZR4 365 aaPredicted RBP3.16□□□□□ -1.9
CHD9-204ENST00000561869 HSFX1Q9UBD0 423 aa3.16□□□□□ -1.9
CHD9-204ENST00000561869 PCDHB1Q9Y5F3 818 aa3.16□□□□□ -1.9
CHD9-204ENST00000561869 COL4A3BPQ9Y5P4 624 aa3.16□□□□□ -1.9
CHD9-204ENST00000561869 AATKQ6ZMQ8 1374 aa3.15□□□□□ -1.9
CHD9-204ENST00000561869 CCDC154A6NI56 674 aa3.15□□□□□ -1.91
CHD9-204ENST00000561869 SGTAO43765 313 aa3.15□□□□□ -1.91
CHD9-204ENST00000561869 CDKL5O76039 1030 aa3.15□□□□□ -1.91
CHD9-204ENST00000561869 RHOBTB3O94955 611 aa3.15□□□□□ -1.91
CHD9-204ENST00000561869 ZFPL1O95159 310 aa3.15□□□□□ -1.91
CHD9-204ENST00000561869 ZRANB2O95218 330 aaKnown RBP eCLIP3.15□□□□□ -1.91
CHD9-204ENST00000561869 LMNAP02545 664 aaKnown RBP3.15□□□□□ -1.91
CHD9-204ENST00000561869 HLA-DOAP06340 250 aa3.15□□□□□ -1.91
CHD9-204ENST00000561869 CKBP12277 381 aa3.15□□□□□ -1.91
CHD9-204ENST00000561869 ALAS1P13196 640 aa3.15□□□□□ -1.91
CHD9-204ENST00000561869 SEC24CP53992 1094 aa3.15□□□□□ -1.91
CHD9-204ENST00000561869 CDC42EP1Q00587 391 aa3.15□□□□□ -1.91
CHD9-204ENST00000561869 DSC2Q02487 901 aa3.15□□□□□ -1.91
CHD9-204ENST00000561869 FOXI1Q12951 378 aa3.15□□□□□ -1.91
CHD9-204ENST00000561869 FLYWCH1Q4VC44 716 aa3.15□□□□□ -1.91
CHD9-204ENST00000561869 ABHD17BQ5VST6 288 aa3.15□□□□□ -1.91
CHD9-204ENST00000561869 FAM177A1Q8N128 213 aaPredicted RBP3.15□□□□□ -1.91
CHD9-204ENST00000561869 MTMR8Q96EF0 704 aa3.15□□□□□ -1.91
CHD9-204ENST00000561869 MARS2Q96GW9 593 aaKnown RBP3.15□□□□□ -1.91
CHD9-204ENST00000561869 TMX3Q96JJ7 454 aa3.15□□□□□ -1.91
CHD9-204ENST00000561869 COQ10AQ96MF6 247 aa3.15□□□□□ -1.91
CHD9-204ENST00000561869 C11orf54Q9H0W9 315 aaPredicted RBP3.15□□□□□ -1.91
CHD9-204ENST00000561869 RNPEPQ9H4A4 650 aa3.15□□□□□ -1.91
CHD9-204ENST00000561869 TDP1Q9NUW8 608 aa3.15□□□□□ -1.91
CHD9-204ENST00000561869 USP25Q9UHP3 1055 aa3.15□□□□□ -1.91
CHD9-204ENST00000561869 KCNE5Q9UJ90 142 aa3.15□□□□□ -1.91
CHD9-204ENST00000561869 CDHR4A6H8M9 788 aa3.14□□□□□ -1.91
CHD9-204ENST00000561869 KIAA0391O15091 583 aaKnown RBP3.14□□□□□ -1.91
CHD9-204ENST00000561869 GRM6O15303 877 aa3.14□□□□□ -1.91
CHD9-204ENST00000561869 XPOTO43592 962 aaKnown RBP3.14□□□□□ -1.91
CHD9-204ENST00000561869 FOSP01100 380 aaPredicted RBP3.14□□□□□ -1.91
CHD9-204ENST00000561869 TYRP1P17643 537 aa3.14□□□□□ -1.91
CHD9-204ENST00000561869 MPLP40238 635 aa3.14□□□□□ -1.91
CHD9-204ENST00000561869 SLC16A1P53985 500 aa3.14□□□□□ -1.91
CHD9-204ENST00000561869 ADKP55263 362 aaKnown RBP3.14□□□□□ -1.91
CHD9-204ENST00000561869 ZNF280AP59817 542 aaPredicted RBP3.14□□□□□ -1.91
CHD9-204ENST00000561869 CXADRP78310 365 aa3.14□□□□□ -1.91
CHD9-204ENST00000561869 HSD11B2P80365 405 aa3.14□□□□□ -1.91
CHD9-204ENST00000561869 KIF23Q02241 960 aaPredicted RBP3.14□□□□□ -1.91
CHD9-204ENST00000561869 TLE1Q04724 770 aa3.14□□□□□ -1.91
CHD9-204ENST00000561869 CYP2A13Q16696 494 aa3.14□□□□□ -1.91
CHD9-204ENST00000561869 PTPN21Q16825 1174 aa3.14□□□□□ -1.91
CHD9-204ENST00000561869 OLFML1Q6UWY5 402 aa3.14□□□□□ -1.91
CHD9-204ENST00000561869 MIGA2Q7L4E1 593 aa3.14□□□□□ -1.91
CHD9-204ENST00000561869 CMTR2Q8IYT2 770 aaKnown RBP3.14□□□□□ -1.91
CHD9-204ENST00000561869 FAM43AQ8N2R8 423 aa3.14□□□□□ -1.91
CHD9-204ENST00000561869 LCORLQ8N3X6 602 aa3.14□□□□□ -1.91
CHD9-204ENST00000561869 FITM2Q8N6M3 262 aa3.14□□□□□ -1.91
CHD9-204ENST00000561869 IL17RDQ8NFM7 739 aa3.14□□□□□ -1.91
CHD9-204ENST00000561869 NSUN6Q8TEA1 469 aaKnown RBP3.14□□□□□ -1.91
CHD9-204ENST00000561869 NUP133Q8WUM0 1156 aa3.14□□□□□ -1.91
CHD9-204ENST00000561869 KAT5Q92993 513 aa3.14□□□□□ -1.91
CHD9-204ENST00000561869 HDAC10Q969S8 669 aa3.14□□□□□ -1.91
CHD9-204ENST00000561869 GPATCH3Q96I76 525 aa3.14□□□□□ -1.91
CHD9-204ENST00000561869 ALOXE3Q9BYJ1 711 aa3.14□□□□□ -1.91
CHD9-204ENST00000561869 BRINP2Q9C0B6 783 aa3.14□□□□□ -1.91
CHD9-204ENST00000561869 REXO4Q9GZR2 422 aaKnown RBP3.14□□□□□ -1.91
CHD9-204ENST00000561869 PRDM13Q9H4Q3 707 aa3.14□□□□□ -1.91
CHD9-204ENST00000561869 CYP4F11Q9HBI6 524 aa3.14□□□□□ -1.91
CHD9-204ENST00000561869 GALNT9Q9HCQ5 603 aa3.14□□□□□ -1.91
CHD9-204ENST00000561869 NIPSNAP3AQ9UFN0 247 aaPredicted RBP3.14□□□□□ -1.91
CHD9-204ENST00000561869 SAP30BPQ9UHR5 308 aaKnown RBP3.14□□□□□ -1.91
CHD9-204ENST00000561869 MAST3O60307 1309 aa3.14□□□□□ -1.91
CHD9-204ENST00000561869 SALL3Q9BXA9 1300 aa3.14□□□□□ -1.91
CHD9-204ENST00000561869 MYADML2A6NDP7 307 aa3.13□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms