RNA–Protein interactions for RNA: ENST00000561271.1

CDC42BPB-208, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 3

Gene CDC42BPB, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-208ENST00000561271 ZC2HC1CQ53FD0 456 aaPredicted RBP18.76■□□□□ 0.59
CDC42BPB-208ENST00000561271 FOXD4L5Q5VV16 416 aaPredicted RBP18.76■□□□□ 0.59
CDC42BPB-208ENST00000561271 RRAGBQ5VZM2 374 aa18.76■□□□□ 0.59
CDC42BPB-208ENST00000561271 SLC39A4Q6P5W5 647 aa18.76■□□□□ 0.59
CDC42BPB-208ENST00000561271 RSPO2Q6UXX9 243 aaPredicted RBP18.76■□□□□ 0.59
CDC42BPB-208ENST00000561271 CYP26C1Q6V0L0 522 aa18.76■□□□□ 0.59
CDC42BPB-208ENST00000561271 GET4Q7L5D6 327 aaPredicted RBP18.76■□□□□ 0.59
CDC42BPB-208ENST00000561271 BMP8AQ7Z5Y6 402 aa18.76■□□□□ 0.59
CDC42BPB-208ENST00000561271 SFR1Q86XK3 245 aa18.76■□□□□ 0.59
CDC42BPB-208ENST00000561271 HSCBQ8IWL3 235 aa18.76■□□□□ 0.59
CDC42BPB-208ENST00000561271 FOXD4L4Q8WXT5 416 aaPredicted RBP18.76■□□□□ 0.59
CDC42BPB-208ENST00000561271 MFSD14AQ96MC6 490 aa18.76■□□□□ 0.59
CDC42BPB-208ENST00000561271 PRKD2Q9BZL6 878 aa18.76■□□□□ 0.59
CDC42BPB-208ENST00000561271 ZSCAN16Q9H4T2 348 aaPredicted RBP18.76■□□□□ 0.59
CDC42BPB-208ENST00000561271 CACNA1HO95180 2353 aa18.76■□□□□ 0.59
CDC42BPB-208ENST00000561271 OBSL1O75147 1896 aa18.75■□□□□ 0.59
CDC42BPB-208ENST00000561271 A0A087X0B3 334 aa18.75■□□□□ 0.59
CDC42BPB-208ENST00000561271 TISP43B9A030 160 aa18.75■□□□□ 0.59
CDC42BPB-208ENST00000561271 FAM189A1O60320 539 aa18.75■□□□□ 0.59
CDC42BPB-208ENST00000561271 PAPLNO95428 1278 aa18.75■□□□□ 0.59
CDC42BPB-208ENST00000561271 PDGFBP01127 241 aaPredicted RBP18.75■□□□□ 0.59
CDC42BPB-208ENST00000561271 CLTAP09496 248 aa18.75■□□□□ 0.59
CDC42BPB-208ENST00000561271 NASPP49321 788 aaPredicted RBP18.75■□□□□ 0.59
CDC42BPB-208ENST00000561271 PPP2R3AQ06190 1150 aa18.75■□□□□ 0.59
CDC42BPB-208ENST00000561271 SLC39A14Q15043 492 aa18.75■□□□□ 0.59
CDC42BPB-208ENST00000561271 STK38Q15208 465 aa18.75■□□□□ 0.59
CDC42BPB-208ENST00000561271 VARS2Q5ST30 1063 aaKnown RBP18.75■□□□□ 0.59
CDC42BPB-208ENST00000561271 MAP4K3Q8IVH8 894 aa18.75■□□□□ 0.59
CDC42BPB-208ENST00000561271 KRI1Q8N9T8 703 aaKnown RBP18.75■□□□□ 0.59
CDC42BPB-208ENST00000561271 SLC7A14Q8TBB6 771 aa18.75■□□□□ 0.59
CDC42BPB-208ENST00000561271 STAMQ92783 540 aa18.75■□□□□ 0.59
CDC42BPB-208ENST00000561271 MYADMQ96S97 322 aa18.75■□□□□ 0.59
CDC42BPB-208ENST00000561271 MSTO1Q9BUK6 570 aa18.75■□□□□ 0.59
CDC42BPB-208ENST00000561271 ARIH1Q9Y4X5 557 aaPredicted RBP18.75■□□□□ 0.59
CDC42BPB-208ENST00000561271 NUB1Q9Y5A7 615 aa18.75■□□□□ 0.59
CDC42BPB-208ENST00000561271 TTC26A0AVF1 554 aa18.74■□□□□ 0.59
CDC42BPB-208ENST00000561271 MYMKA6NI61 221 aa18.74■□□□□ 0.59
CDC42BPB-208ENST00000561271 OGTO15294 1046 aa18.74■□□□□ 0.59
CDC42BPB-208ENST00000561271 SCP2P22307 547 aa18.74■□□□□ 0.59
CDC42BPB-208ENST00000561271 RPL9P32969 192 aaKnown RBP18.74■□□□□ 0.59
CDC42BPB-208ENST00000561271 MCM4P33991 863 aa18.74■□□□□ 0.59
CDC42BPB-208ENST00000561271 STAT6P42226 847 aa18.74■□□□□ 0.59
CDC42BPB-208ENST00000561271 GTF2BQ00403 316 aa18.74■□□□□ 0.59
CDC42BPB-208ENST00000561271 RAB33AQ14088 237 aa18.74■□□□□ 0.59
CDC42BPB-208ENST00000561271 ENOX2Q16206 610 aaKnown RBP18.74■□□□□ 0.59
CDC42BPB-208ENST00000561271 PPM1LQ5SGD2 360 aa18.74■□□□□ 0.59
CDC42BPB-208ENST00000561271 ANKS3Q6ZW76 656 aa18.74■□□□□ 0.59
CDC42BPB-208ENST00000561271 SUGP1Q8IWZ8 645 aaKnown RBP18.74■□□□□ 0.59
CDC42BPB-208ENST00000561271 UBALD2Q8IYN6 164 aa18.74■□□□□ 0.59
CDC42BPB-208ENST00000561271 FBXL6Q8N531 539 aa18.74■□□□□ 0.59
CDC42BPB-208ENST00000561271 DDX12PQ92771 950 aa18.74■□□□□ 0.59
CDC42BPB-208ENST00000561271 KIF12Q96FN5 646 aa18.74■□□□□ 0.59
CDC42BPB-208ENST00000561271 IKZF4Q9H2S9 585 aa18.74■□□□□ 0.59
CDC42BPB-208ENST00000561271 GTF3C3Q9Y5Q9 886 aa18.74■□□□□ 0.59
CDC42BPB-208ENST00000561271 BACE2Q9Y5Z0 518 aa18.74■□□□□ 0.59
CDC42BPB-208ENST00000561271 MORC2Q9Y6X9 1032 aaPredicted RBP18.74■□□□□ 0.59
CDC42BPB-208ENST00000561271 NUP210Q8TEM1 1887 aaPredicted RBP18.73■□□□□ 0.59
CDC42BPB-208ENST00000561271 PIEZO1Q92508 2521 aa18.73■□□□□ 0.59
CDC42BPB-208ENST00000561271 ANKRD63C9JTQ0 380 aa18.73■□□□□ 0.59
CDC42BPB-208ENST00000561271 CCL16O15467 120 aa18.73■□□□□ 0.59
CDC42BPB-208ENST00000561271 GUCY2FP51841 1108 aa18.73■□□□□ 0.59
CDC42BPB-208ENST00000561271 VCPP55072 806 aaKnown RBP18.73■□□□□ 0.59
CDC42BPB-208ENST00000561271 ROR1Q01973 937 aa18.73■□□□□ 0.59
CDC42BPB-208ENST00000561271 AXDND1Q5T1B0 1012 aaPredicted RBP18.73■□□□□ 0.59
CDC42BPB-208ENST00000561271 CCDC73Q6ZRK6 1079 aa18.73■□□□□ 0.59
CDC42BPB-208ENST00000561271 PANK2Q9BZ23 570 aa18.73■□□□□ 0.59
CDC42BPB-208ENST00000561271 PLEKHA5Q9HAU0 1116 aa18.73■□□□□ 0.59
CDC42BPB-208ENST00000561271 POLIQ9UNA4 740 aa18.73■□□□□ 0.59
CDC42BPB-208ENST00000561271 TICRRQ7Z2Z1 1910 aa18.72■□□□□ 0.59
CDC42BPB-208ENST00000561271 A0A0B4J269 797 aa18.72■□□□□ 0.59
CDC42BPB-208ENST00000561271 LACTBL1A8MY62 500 aa18.72■□□□□ 0.59
CDC42BPB-208ENST00000561271 SYN3O14994 580 aa18.72■□□□□ 0.59
CDC42BPB-208ENST00000561271 HSP90AA1P07900 732 aaKnown RBP18.72■□□□□ 0.59
CDC42BPB-208ENST00000561271 HNRNPA1P09651 372 aaKnown RBP eCLIP18.72■□□□□ 0.59
CDC42BPB-208ENST00000561271 NTHL1P78549 312 aa18.72■□□□□ 0.59
CDC42BPB-208ENST00000561271 SV2BQ7L1I2 683 aa18.72■□□□□ 0.59
CDC42BPB-208ENST00000561271 GRASPQ7Z6J2 395 aaPredicted RBP18.72■□□□□ 0.59
CDC42BPB-208ENST00000561271 PDILTQ8N807 584 aa18.72■□□□□ 0.59
CDC42BPB-208ENST00000561271 LINC00301Q8NCQ3 95 aa18.72■□□□□ 0.59
CDC42BPB-208ENST00000561271 DNAJC19Q96DA6 116 aa18.72■□□□□ 0.59
CDC42BPB-208ENST00000561271 FAM212AQ96EL1 285 aa18.72■□□□□ 0.59
CDC42BPB-208ENST00000561271 SUSD3Q96L08 255 aa18.72■□□□□ 0.59
CDC42BPB-208ENST00000561271 ST6GALNAC4Q9H4F1 302 aa18.72■□□□□ 0.59
CDC42BPB-208ENST00000561271 RPF1Q9H9Y2 349 aaKnown RBP18.72■□□□□ 0.59
CDC42BPB-208ENST00000561271 KCNK12Q9HB15 430 aa18.72■□□□□ 0.59
CDC42BPB-208ENST00000561271 TBC1D7Q9P0N9 293 aa18.72■□□□□ 0.59
CDC42BPB-208ENST00000561271 UBQLN1Q9UMX0 589 aaKnown RBP18.72■□□□□ 0.59
CDC42BPB-208ENST00000561271 WDR27A2RRH5 827 aa18.71■□□□□ 0.59
CDC42BPB-208ENST00000561271 PPP1R37O75864 691 aa18.71■□□□□ 0.59
CDC42BPB-208ENST00000561271 HOXA9P31269 272 aa18.71■□□□□ 0.59
CDC42BPB-208ENST00000561271 ABCD1P33897 745 aa18.71■□□□□ 0.59
CDC42BPB-208ENST00000561271 ARPP19P56211 112 aa18.71■□□□□ 0.59
CDC42BPB-208ENST00000561271 KYAT1Q16773 422 aa18.71■□□□□ 0.59
CDC42BPB-208ENST00000561271 FOXD4L6Q3SYB3 417 aaPredicted RBP18.71■□□□□ 0.59
CDC42BPB-208ENST00000561271 FOXD4L3Q6VB84 417 aaPredicted RBP18.71■□□□□ 0.59
CDC42BPB-208ENST00000561271 RSAD2Q8WXG1 361 aa18.71■□□□□ 0.59
CDC42BPB-208ENST00000561271 MRPL44Q9H9J2 332 aaKnown RBP18.71■□□□□ 0.59
CDC42BPB-208ENST00000561271 TFIP11Q9UBB9 837 aaKnown RBP18.71■□□□□ 0.59
CDC42BPB-208ENST00000561271 EPS15L1Q9UBC2 864 aa18.71■□□□□ 0.59
CDC42BPB-208ENST00000561271 CPSF3Q9UKF6 684 aaKnown RBP18.71■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms